Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00291
         (786 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    27   0.66 
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   2.0  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   2.7  

>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 535 QIENVLRRYIKEYVTCHTCRSP 600
           Q E++LR   ++ +TCH CR P
Sbjct: 189 QSESILRVGPEKKITCHRCRKP 210


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 580 CHTCRSPDTILQKDTRLFFLQCETCGSRCS 669
           C TCR   T   + T  +  +C TC  RC+
Sbjct: 653 CGTCRCTVTEDGRYTGRYCEKCPTCAGRCN 682


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 186 EEDVRGEDQENVEDEHGEWVGSD 254
           EED  GE+ E  EDE  E+ G D
Sbjct: 475 EEDYEGEEDE--EDEEDEYEGDD 495


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,079
Number of Sequences: 2352
Number of extensions: 15034
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)