Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00288X
         (402 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006D0116 Cluster: hypothetical protein TTHERM_0082...    33   2.8  
UniRef50_A6L7U5 Cluster: Putative uncharacterized protein; n=1; ...    31   8.5  
UniRef50_Q8I2K6 Cluster: Putative uncharacterized protein PFI150...    31   8.5  

>UniRef50_UPI00006D0116 Cluster: hypothetical protein
           TTHERM_00825220; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00825220 - Tetrahymena
           thermophila SB210
          Length = 385

 Score = 32.7 bits (71), Expect = 2.8
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -2

Query: 266 VD*RLHEINLKQSFFSIF*CSTYLMYVYNSICSSKECI 153
           +D  +H I++ +  F +F C  +  Y  N +C  K+C+
Sbjct: 3   IDNTIHSISINERAFPVFFCKEHPKYELNLVCREKKCM 40


>UniRef50_A6L7U5 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides vulgatus ATCC 8482|Rep: Putative
           uncharacterized protein - Bacteroides vulgatus (strain
           ATCC 8482 / DSM 1447 / NCTC 11154)
          Length = 105

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 354 SCIRFRHYIPSFYHGVFLFMIIASKC*NC 268
           S I FRHY P  YH +F +     +C NC
Sbjct: 60  SMILFRHYTPQLYHRIFFY----ERCYNC 84


>UniRef50_Q8I2K6 Cluster: Putative uncharacterized protein PFI1500w;
            n=2; cellular organisms|Rep: Putative uncharacterized
            protein PFI1500w - Plasmodium falciparum (isolate 3D7)
          Length = 4530

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +3

Query: 6    FRKILKNYIS*TVSFRNLIFCKKLSIYEYYLQKNC*LPNRRNIKESLAKN--TLFTRTYT 179
            F +I  N+     +F N ++  K + Y YY+ KN    N  N    +  N  TLF   + 
Sbjct: 4311 FTRISNNFFY--YNFNNFLYLYKYNYYLYYIHKNKVHINHNNDVSYIQNNPLTLFKNKFN 4368

Query: 180  IVN 188
            I+N
Sbjct: 4369 IIN 4371


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,219,633
Number of Sequences: 1657284
Number of extensions: 6821904
Number of successful extensions: 13908
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13907
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)