Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00288X
         (402 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      23   1.1  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   1.1  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   3.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   6.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   6.0  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   6.0  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -2

Query: 137 LYVPSIWKLTIFL*IVLINRKLFAK 63
           L + ++WKLTIFL  + ++ +L +K
Sbjct: 5   LSLVTLWKLTIFLSSMCLDPRLNSK 29


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -2

Query: 389 IITIPVFSGYENLVLDFVII-FQVFIMGFFCS 297
           I T+   SG+EN V  +++  F+ ++  FFCS
Sbjct: 25  IYTVVEESGFENFVKTYLVSDFENYVT-FFCS 55


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 332 IFQVFIMGFFC 300
           IF  F+MG FC
Sbjct: 75  IFGAFVMGLFC 85


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -3

Query: 226 FFLYFDVVLI 197
           ++LYFDV++I
Sbjct: 220 YYLYFDVIVI 229


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -3

Query: 226 FFLYFDVVLI 197
           ++LYFDV++I
Sbjct: 146 YYLYFDVIVI 155


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 209 CSTYLMYVYNSICSSKEC 156
           C ++    YN+I S  EC
Sbjct: 25  CKSFFGRTYNNISSISEC 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,309
Number of Sequences: 336
Number of extensions: 2208
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)