Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00288X
         (402 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   0.99 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   1.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   1.7  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   6.9  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    20   9.2  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.4 bits (48), Expect = 0.99
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 200 YLMYVYNSICSSKECIFG*TFLYVPSIWKLTI 105
           Y + +YN+   S + +   TF+Y P   K TI
Sbjct: 208 YALIIYNNADDSFQRLTSSTFVYDPRYTKYTI 239


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 325 WNIMTKSNTRFSYPENTGIVI 387
           W I+    TRF YP+   +++
Sbjct: 645 WMIIEPPGTRFFYPDRKQVIL 665


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 325 WNIMTKSNTRFSYPENTGIVI 387
           W I+    TRF YP+   +++
Sbjct: 735 WMIIEPPGTRFFYPDRKQVIL 755


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 239 LKQSFFSIF*CSTYLMYVYNSICSSK 162
           L+ SF  +  CST  +YV + +  SK
Sbjct: 149 LRLSFCVVLACSTATVYVMSVVGLSK 174


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 363 VRKSCIRFRHYIPSF 319
           V  +C+ F+H++ SF
Sbjct: 273 VGPACLPFQHFLDSF 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,817
Number of Sequences: 438
Number of extensions: 2376
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)