Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00287
         (727 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0900 + 7091970-7092068,7092175-7093131,7093210-7093968,709...    29   3.8  
01_03_0264 - 14419381-14419431,14419807-14419875,14420771-144208...    28   8.7  

>01_01_0900 +
           7091970-7092068,7092175-7093131,7093210-7093968,
           7094322-7094366
          Length = 619

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +2

Query: 254 VVSSLFRASRQSTAISTFARYNHEQKNPMIKTWNIMTKSNTRFSYPENTDIV 409
           ++++L  A R   A +TF R  H    P   T+N + K       PE +  V
Sbjct: 155 LINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQRV 206


>01_03_0264 -
           14419381-14419431,14419807-14419875,14420771-14420817,
           14421340-14422474
          Length = 433

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 562 LPENLFLSQFSAFFLRNIREHLGEDINVEYCPTGSLVLASND 687
           +P  LFL  + A FL N R   G    +       +VLA+ND
Sbjct: 202 IPPELFLRPYDAIFLNNNRFTSGIPDTIGRSTASVIVLANND 243


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,722,034
Number of Sequences: 37544
Number of extensions: 277651
Number of successful extensions: 556
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)