Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00287
         (727 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013902-1|AAH13902.1|  486|Homo sapiens FAD-dependent oxidoredu...    52   2e-06
AF103801-1|AAF02421.1|  486|Homo sapiens unknown protein.              52   2e-06
BC002910-1|AAH02910.2|  367|Homo sapiens FOXRED1 protein protein.      42   0.002
X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein.          33   1.4  

>BC013902-1|AAH13902.1|  486|Homo sapiens FAD-dependent
           oxidoreductase domain containing 1 protein.
          Length = 486

 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
 Frame = +1

Query: 508 HKQAQRHLQHGTLSQHFTLPENLFLSQFSAFFLRNIREHL----GEDINVEYCPTGSLVL 675
           + QA   L  G + Q F+LPEN+ LS FSA FLRNI E+L       +++ + P+G L+L
Sbjct: 103 YSQASTGLSVGGICQQFSLPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLL 162

Query: 676 ASNDYAQKLE 705
           AS   A  +E
Sbjct: 163 ASEKDAAAME 172


>AF103801-1|AAF02421.1|  486|Homo sapiens unknown protein.
          Length = 486

 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
 Frame = +1

Query: 508 HKQAQRHLQHGTLSQHFTLPENLFLSQFSAFFLRNIREHL----GEDINVEYCPTGSLVL 675
           + QA   L  G + Q F+LPEN+ LS FSA FLRNI E+L       +++ + P+G L+L
Sbjct: 103 YSQASTGLSVGGICQQFSLPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLL 162

Query: 676 ASNDYAQKLE 705
           AS   A  +E
Sbjct: 163 ASEKDAAAME 172


>BC002910-1|AAH02910.2|  367|Homo sapiens FOXRED1 protein protein.
          Length = 367

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
 Frame = +1

Query: 559 TLPENLFLSQFSAFFLRNIREHL----GEDINVEYCPTGSLVLASNDYAQKLE 705
           +LPEN+ LS FSA FLRNI E+L       +++ + P+G L+LAS   A  +E
Sbjct: 1   SLPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASEKDAAAME 53


>X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein.
          Length = 1028

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = +1

Query: 460 QSW*WSLSSGHRK---RFFHKQAQRHLQHGTLSQHFT-LPEN-LFLSQFSAFFLRNIREH 624
           QSW W  + G RK   R +  Q  R L  G + +H    PEN  FL      FL N+R  
Sbjct: 730 QSW-WRGTLGRRKAAKRKWAAQTIRRLIRGFILRHAPRCPENAFFLDHVRTSFLLNLRRQ 788

Query: 625 LGEDINVEYCPT 660
           L  ++   Y PT
Sbjct: 789 LPRNVLDTYWPT 800


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,903,079
Number of Sequences: 237096
Number of extensions: 1694397
Number of successful extensions: 3041
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3041
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)