Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00287
         (727 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113419-1|AAM29424.1|  515|Drosophila melanogaster RE18450p pro...    64   1e-10
AE014134-3026|AAF53748.1|  515|Drosophila melanogaster CG10655-P...    64   1e-10
AY058276-1|AAL13505.1|  399|Drosophila melanogaster GH02863p pro...    48   1e-05
AE013599-207|AAM70815.1|  440|Drosophila melanogaster CG3270-PA ...    48   1e-05

>AY113419-1|AAM29424.1|  515|Drosophila melanogaster RE18450p
           protein.
          Length = 515

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 28/71 (39%), Positives = 48/71 (67%)
 Frame = +1

Query: 508 HKQAQRHLQHGTLSQHFTLPENLFLSQFSAFFLRNIREHLGEDINVEYCPTGSLVLASND 687
           + Q+   +  G L Q F+LPEN+ +S F+A FLR+ R+H GE++ +++ P G L+LA  +
Sbjct: 135 YAQSATRVSVGGLCQQFSLPENIQMSLFAADFLRSARKHFGEEVPLQFTPHGHLMLAGEE 194

Query: 688 YAQKLEETSSL 720
           +A+ L+ +S L
Sbjct: 195 HAESLKRSSQL 205



 Score = 39.1 bits (87), Expect = 0.006
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +2

Query: 386 YPENTDIVXXXXXXXXAATAYWLKRRAGDGLSVVVIEKD 502
           +  + D++        ++ AYWLK +A DGL+VVV+EKD
Sbjct: 94  FQTHCDVLIIGGGGVGSSIAYWLKEKARDGLNVVVVEKD 132


>AE014134-3026|AAF53748.1|  515|Drosophila melanogaster CG10655-PA
           protein.
          Length = 515

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 28/71 (39%), Positives = 48/71 (67%)
 Frame = +1

Query: 508 HKQAQRHLQHGTLSQHFTLPENLFLSQFSAFFLRNIREHLGEDINVEYCPTGSLVLASND 687
           + Q+   +  G L Q F+LPEN+ +S F+A FLR+ R+H GE++ +++ P G L+LA  +
Sbjct: 135 YAQSATRVSVGGLCQQFSLPENIQMSLFAADFLRSARKHFGEEVPLQFTPHGHLMLAGEE 194

Query: 688 YAQKLEETSSL 720
           +A+ L+ +S L
Sbjct: 195 HAESLKRSSQL 205



 Score = 39.1 bits (87), Expect = 0.006
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +2

Query: 386 YPENTDIVXXXXXXXXAATAYWLKRRAGDGLSVVVIEKD 502
           +  + D++        ++ AYWLK +A DGL+VVV+EKD
Sbjct: 94  FQTHCDVLIIGGGGVGSSIAYWLKEKARDGLNVVVVEKD 132


>AY058276-1|AAL13505.1|  399|Drosophila melanogaster GH02863p
           protein.
          Length = 399

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 29/71 (40%), Positives = 40/71 (56%)
 Frame = +1

Query: 508 HKQAQRHLQHGTLSQHFTLPENLFLSQFSAFFLRNIREHLGEDINVEYCPTGSLVLASND 687
           +  A   L  G + Q F+L EN+ +S F   F+ N REHLG D+++ Y P G L+LAS  
Sbjct: 31  YTSASTVLSVGGVRQQFSLAENIEMSLFGYNFVVNGREHLG-DVDLCYQPNGYLILASEK 89

Query: 688 YAQKLEETSSL 720
            A  L + S L
Sbjct: 90  GAHILAKNSKL 100


>AE013599-207|AAM70815.1|  440|Drosophila melanogaster CG3270-PA
           protein.
          Length = 440

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 29/71 (40%), Positives = 40/71 (56%)
 Frame = +1

Query: 508 HKQAQRHLQHGTLSQHFTLPENLFLSQFSAFFLRNIREHLGEDINVEYCPTGSLVLASND 687
           +  A   L  G + Q F+L EN+ +S F   F+ N REHLG D+++ Y P G L+LAS  
Sbjct: 72  YTSASTVLSVGGVRQQFSLAENIEMSLFGYNFVVNGREHLG-DVDLCYQPNGYLILASEK 130

Query: 688 YAQKLEETSSL 720
            A  L + S L
Sbjct: 131 GAHILAKNSKL 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,665,048
Number of Sequences: 53049
Number of extensions: 515589
Number of successful extensions: 1239
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)