Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00287
         (727 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77667-3|CAB01237.1|  527|Caenorhabditis elegans Hypothetical pr...    40   0.002
AF016430-11|AAB65375.1|  387|Caenorhabditis elegans Hypothetical...    29   4.5  
Z81017-3|CAB54257.1|  629|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z81017-2|CAB02672.1|  578|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z81017-1|CAB02669.1|  592|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U80221-1|AAB38367.1|  579|Caenorhabditis elegans F58A3.1b protein.     28   7.8  
U80220-1|AAB38366.1|  592|Caenorhabditis elegans F58A3.1a protein.     28   7.8  
U56961-6|AAK39299.1|  497|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z77667-3|CAB01237.1|  527|Caenorhabditis elegans Hypothetical
           protein M04B2.4 protein.
          Length = 527

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
 Frame = +1

Query: 529 LQHGTLSQHFTLPENLFLSQFSAFFLRNIREHL----GEDINVEYCPTGSLVLASND 687
           L  G ++Q F++PE + +S F+  FLR+  EHL     E  ++ + PTG L LA  D
Sbjct: 139 LSTGGITQQFSIPEFVDMSLFTTEFLRHAGEHLRILDSEQPDINFFPTGYLRLAKTD 195



 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 386 YPENTDIVXXXXXXXXAATAYWLKRRAGD-GLSVVVIEKD 502
           +P   +IV        ++TA+WLK R  D    VVV+E +
Sbjct: 90  FPYRAEIVIIGGGLSGSSTAFWLKERFRDEDFKVVVVENN 129


>AF016430-11|AAB65375.1|  387|Caenorhabditis elegans Hypothetical
           protein C05C8.8 protein.
          Length = 387

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/45 (24%), Positives = 24/45 (53%)
 Frame = +2

Query: 251 NVVSSLFRASRQSTAISTFARYNHEQKNPMIKTWNIMTKSNTRFS 385
           N +S L    +++    +   Y+H+ K+ ++ TWN +T  +  +S
Sbjct: 27  NQISLLINVFKEANHSFSIHLYSHKNKDCVVPTWNRVTSKDVPYS 71


>Z81017-3|CAB54257.1|  629|Caenorhabditis elegans Hypothetical
           protein F58A3.1c protein.
          Length = 629

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 260 SSLFRASRQSTAISTFARYNHEQKNPMIKTWNIMTKSNTRFSYPENT 400
           SS F  + +      FA ++ E  N  IK W +  K +  F Y +NT
Sbjct: 214 SSQFEVNTEGKLYVEFAPFD-EVMNYRIKAWTLELKRSNEFVYNQNT 259


>Z81017-2|CAB02672.1|  578|Caenorhabditis elegans Hypothetical
           protein F58A3.1b protein.
          Length = 578

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 260 SSLFRASRQSTAISTFARYNHEQKNPMIKTWNIMTKSNTRFSYPENT 400
           SS F  + +      FA ++ E  N  IK W +  K +  F Y +NT
Sbjct: 163 SSQFEVNTEGKLYVEFAPFD-EVMNYRIKAWTLELKRSNEFVYNQNT 208


>Z81017-1|CAB02669.1|  592|Caenorhabditis elegans Hypothetical
           protein F58A3.1a protein.
          Length = 592

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 260 SSLFRASRQSTAISTFARYNHEQKNPMIKTWNIMTKSNTRFSYPENT 400
           SS F  + +      FA ++ E  N  IK W +  K +  F Y +NT
Sbjct: 177 SSQFEVNTEGKLYVEFAPFD-EVMNYRIKAWTLELKRSNEFVYNQNT 222


>U80221-1|AAB38367.1|  579|Caenorhabditis elegans F58A3.1b protein.
          Length = 579

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 260 SSLFRASRQSTAISTFARYNHEQKNPMIKTWNIMTKSNTRFSYPENT 400
           SS F  + +      FA ++ E  N  IK W +  K +  F Y +NT
Sbjct: 164 SSQFEVNTEGKLYVEFAPFD-EVMNYRIKAWTLELKRSNEFVYNQNT 209


>U80220-1|AAB38366.1|  592|Caenorhabditis elegans F58A3.1a protein.
          Length = 592

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 260 SSLFRASRQSTAISTFARYNHEQKNPMIKTWNIMTKSNTRFSYPENT 400
           SS F  + +      FA ++ E  N  IK W +  K +  F Y +NT
Sbjct: 177 SSQFEVNTEGKLYVEFAPFD-EVMNYRIKAWTLELKRSNEFVYNQNT 222


>U56961-6|AAK39299.1|  497|Caenorhabditis elegans Hypothetical
           protein T19D7.1 protein.
          Length = 497

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
 Frame = +2

Query: 521 KGTFSMEHFHNISHYQKICSYR---NSVHS-SLETLENILVKI*MLNIVQLGH*YWRVTT 688
           +G F M   H  S++QKI  YR   NS  S   + L+N  + + +  ++ L    + + T
Sbjct: 133 EGFFEMSWTHLYSYFQKIFQYRKFDNSKSSCQKKLLKNWKIFLKIRKMLSLSRNVYIIAT 192

Query: 689 MHKN*KKLLHY 721
           ++    K LHY
Sbjct: 193 IYVKIYKNLHY 203


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,124,975
Number of Sequences: 27780
Number of extensions: 298090
Number of successful extensions: 874
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)