Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00286
(766 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 172 4e-44
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 172 4e-44
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 172 4e-44
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 95 1e-20
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 92 7e-20
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 58 1e-09
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 41 2e-04
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 37 0.003
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 36 0.008
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 32 0.078
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 29 0.73
SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr 1|||Ma... 29 0.73
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 29 0.96
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 29 0.96
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 2.2
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 6.8
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 26 6.8
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 26 6.8
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 25 9.0
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 172 bits (419), Expect = 4e-44
Identities = 79/85 (92%), Positives = 81/85 (95%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERE GITIDI
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
ALWKFET KY VT+IDAPGHRDFIK
Sbjct: 76 ALWKFETPKYNVTVIDAPGHRDFIK 100
Score = 141 bits (342), Expect = 9e-35
Identities = 62/86 (72%), Positives = 71/86 (82%)
Frame = +2
Query: 506 PAAVAFVPISGWHGDNMLELSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 685
P V FVP+SG+ GDNM+E +T MPW++GWQ E K G GK L+EA+D+I PPARPTDK
Sbjct: 183 PKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARPTDK 242
Query: 686 PLRLPLQDVYKIGGIGTVPVGRVENG 763
PLRLPLQDVYKIGGIGTVPVGRVE G
Sbjct: 243 PLRLPLQDVYKIGGIGTVPVGRVETG 268
Score = 139 bits (336), Expect = 5e-34
Identities = 66/88 (75%), Positives = 78/88 (88%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 425
F +NMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+
Sbjct: 98 FIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDT 157
Query: 426 TEPPYSEPRFEEIKKEVSSYIKKIGYNP 509
T +S+ RFEEI KE S++IKK+G+NP
Sbjct: 158 T--GWSQARFEEIVKETSNFIKKVGFNP 183
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 172 bits (419), Expect = 4e-44
Identities = 79/85 (92%), Positives = 81/85 (95%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERE GITIDI
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
ALWKFET KY VT+IDAPGHRDFIK
Sbjct: 76 ALWKFETPKYNVTVIDAPGHRDFIK 100
Score = 141 bits (342), Expect = 9e-35
Identities = 62/86 (72%), Positives = 71/86 (82%)
Frame = +2
Query: 506 PAAVAFVPISGWHGDNMLELSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 685
P V FVP+SG+ GDNM+E +T MPW++GWQ E K G GK L+EA+D+I PPARPTDK
Sbjct: 183 PKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARPTDK 242
Query: 686 PLRLPLQDVYKIGGIGTVPVGRVENG 763
PLRLPLQDVYKIGGIGTVPVGRVE G
Sbjct: 243 PLRLPLQDVYKIGGIGTVPVGRVETG 268
Score = 139 bits (337), Expect = 3e-34
Identities = 67/88 (76%), Positives = 78/88 (88%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 425
F +NMITGTSQADCAVLI+ GTGEFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDT 157
Query: 426 TEPPYSEPRFEEIKKEVSSYIKKIGYNP 509
T +S+ RFEEI KE S++IKK+G+NP
Sbjct: 158 T--GWSQARFEEIVKETSNFIKKVGFNP 183
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 172 bits (419), Expect = 4e-44
Identities = 79/85 (92%), Positives = 81/85 (95%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERE GITIDI
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
ALWKFET KY VT+IDAPGHRDFIK
Sbjct: 76 ALWKFETPKYNVTVIDAPGHRDFIK 100
Score = 141 bits (342), Expect = 9e-35
Identities = 62/86 (72%), Positives = 71/86 (82%)
Frame = +2
Query: 506 PAAVAFVPISGWHGDNMLELSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 685
P V FVP+SG+ GDNM+E +T MPW++GWQ E K G GK L+EA+D+I PPARPTDK
Sbjct: 183 PKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARPTDK 242
Query: 686 PLRLPLQDVYKIGGIGTVPVGRVENG 763
PLRLPLQDVYKIGGIGTVPVGRVE G
Sbjct: 243 PLRLPLQDVYKIGGIGTVPVGRVETG 268
Score = 139 bits (336), Expect = 5e-34
Identities = 66/88 (75%), Positives = 78/88 (88%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 425
F +NMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+
Sbjct: 98 FIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDT 157
Query: 426 TEPPYSEPRFEEIKKEVSSYIKKIGYNP 509
T +S+ RFEEI KE S++IKK+G+NP
Sbjct: 158 T--GWSQARFEEIVKETSNFIKKVGFNP 183
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 95.1 bits (226), Expect = 1e-20
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD + ER G+T+D+
Sbjct: 186 VDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDV 245
Query: 181 ALWKFETSKYYVTIIDAPGHRDFI 252
A FE+ K I DAPGHRDFI
Sbjct: 246 ASTTFESDKKIYEIGDAPGHRDFI 269
Score = 80.6 bits (190), Expect = 2e-16
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 425
F MI G S AD AVL+V + FE G +NGQTREHA L LG+ +++V VNK+D
Sbjct: 268 FISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRALGISEIVVSVNKLDL 327
Query: 426 TEPPYSEPRFEEIKKEVSSY-IKKIGY 503
+SE RF+EIK VS + IK +G+
Sbjct: 328 MS--WSEDRFQEIKNIVSDFLIKMVGF 352
Score = 48.4 bits (110), Expect = 1e-06
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +2
Query: 515 VAFVPISGWHGDNMLELSTK--MPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 688
V FVPIS G N+++ + W+KG L+ ALD ++PP +P KP
Sbjct: 357 VHFVPISAISGTNLIQKDSSDLYKWYKG------------PTLLSALDQLVPPEKPYRKP 404
Query: 689 LRLPLQDVYKIGGIGTVPVGRVENG 763
LRL + DVY+ TV GRVE G
Sbjct: 405 LRLSIDDVYRSPRSVTV-TGRVEAG 428
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 92.3 bits (219), Expect = 7e-20
Identities = 42/85 (49%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEP 434
NMI G SQAD VL+++A GEFEAG + GQTREHA+LA T G+ L+V +NKMD
Sbjct: 332 NMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLARTQGINHLVVVINKMDEPSV 391
Query: 435 PYSEPRFEEIKKEVSSYIKKI-GYN 506
+SE R++E ++S +++++ GYN
Sbjct: 392 QWSEERYKECVDKLSMFLRRVAGYN 416
Score = 86.2 bits (204), Expect = 5e-18
Identities = 37/84 (44%), Positives = 57/84 (67%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD ERE G T+++
Sbjct: 247 VDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEV 306
Query: 181 ALWKFETSKYYVTIIDAPGHRDFI 252
FET +++DAPGH+ ++
Sbjct: 307 GRAYFETEHRRFSLLDAPGHKGYV 330
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 58.4 bits (135), Expect = 1e-09
Identities = 34/89 (38%), Positives = 51/89 (57%)
Frame = +3
Query: 219 HH*CSWTQRFHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 398
H C + +NMITG + D A+++V+A G+ QTREH LLA +GVKQ+
Sbjct: 120 HVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP-------QTREHLLLARQVGVKQI 172
Query: 399 IVGVNKMDSTEPPYSEPRFEEIKKEVSSY 485
+V +NK+D EP E E+++ +S Y
Sbjct: 173 VVYINKVDMVEPDMIELVEMEMRELLSEY 201
Score = 44.0 bits (99), Expect = 2e-05
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 635 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVENG 763
L+EA+D+ + P R TD P + ++DV+ I G GTV GRVE G
Sbjct: 234 LMEAVDSYITLPERKTDVPFLMAIEDVFSISGRGTVVTGRVERG 277
Score = 43.2 bits (97), Expect = 4e-05
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +1
Query: 97 EMGKGSFKYAWVLDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIK 255
++G+ SF +DK E+ GITI A ++ET+ + +D PGH D+IK
Sbjct: 79 DLGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIK 131
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +1
Query: 130 VLDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDF 249
V+D L AER+ GITI+ A F + +ID PGH DF
Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADF 106
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 37.1 bits (82), Expect = 0.003
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +3
Query: 435 PYSEPRFEEIKKEVSSYIKKIGYNPLLSLSCPF--LDGTETTCWSFQPKCLGSRDGRWSV 608
PY +P+ I K + I K +N L L C F LDG + + +S+ P + +G SV
Sbjct: 455 PYLKPKLV-ISKSFGTLIVK-NHNQLSLLKCTFSNLDGNDCSWFSYLPNAIVLANGT-SV 511
Query: 609 RKAKLTENASLKLSMPSCHLPAPLTSPCVFPC 704
A TE++S+ + P+ L P PC
Sbjct: 512 FWAVATEDSSIYIYSPAGRLLLPPVVVAATPC 543
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 35.5 bits (78), Expect = 0.008
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = +1
Query: 133 LDKLKAERELGITIDIA----LWKFETSKYYVTIIDAPGHRDF 249
LDKL+ ER GIT+ ++ + Y + +ID PGH DF
Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDF 137
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +2
Query: 575 MPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRV 754
+P K V K GK + L E + I PP + PLR L D + G + + R+
Sbjct: 206 IPMSKPILVSSKTGKNVEQILPEIIQKIPPPKGSENAPLRCLLIDSWYNSYQGVIGLVRI 265
Query: 755 ENG 763
G
Sbjct: 266 MEG 268
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 32.3 bits (70), Expect = 0.078
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 19/102 (18%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE GITI
Sbjct: 68 IDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELEREKGITIQS 117
Query: 181 A----LWK---------------FETSKYYVTIIDAPGHRDF 249
A W+ FE S Y + IID PGH DF
Sbjct: 118 AATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDF 158
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 29.1 bits (62), Expect = 0.73
Identities = 20/89 (22%), Positives = 40/89 (44%)
Frame = +3
Query: 258 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 437
M+ G + D A+L++A QT EH + +K +I+ NK+D
Sbjct: 125 MLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQLKHIIILQNKVDLIRES 178
Query: 438 YSEPRFEEIKKEVSSYIKKIGYNPLLSLS 524
+E ++ I K + + + +P++ +S
Sbjct: 179 AAEEHYQSILKFIKGTVAE--NSPIVPIS 205
>SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 835
Score = 29.1 bits (62), Expect = 0.73
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -2
Query: 675 GRAGGRMASRASMRHFPSALPSLRSTCHPLNQGILVESSNMLSPCH 538
G GG S+ P+ LPS + P L E +ML CH
Sbjct: 545 GAGGGHAPDIISLVQNPNILPSSTNPTRPFTTNTLDEELDMLMVCH 590
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 28.7 bits (61), Expect = 0.96
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYAWVLDKLKAERELGIT 171
VD GKST T L+ K G I K +F + A E +G + + L AE
Sbjct: 28 VDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAIS-LFAEMTDDDM 86
Query: 172 IDIALWKFETSKYYVTIIDAPGHRDF 249
D+ + + + V +ID+PGH DF
Sbjct: 87 KDMKE-PADGTDFLVNLIDSPGHVDF 111
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 28.7 bits (61), Expect = 0.96
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYAWVLDKLKAERELGIT 171
VD GKST T L+ K G I K +F + A E +G + + L AE
Sbjct: 28 VDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAIS-LFAEMTDDDM 86
Query: 172 IDIALWKFETSKYYVTIIDAPGHRDF 249
D+ + + + V +ID+PGH DF
Sbjct: 87 KDMKE-PADGTDFLVNLIDSPGHVDF 111
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -3
Query: 197 SNFQRAISIVIPSSRSAFSLSNTQAYLKDPLPISWASFSNFSMV 66
S F IS+ +P+ FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +1
Query: 136 DKLKAER-ELGITIDIALWKFETSKYYV--TIIDAPGHRDFI 252
+K++A+ E + I+I + E +++ T+ID PG DFI
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFI 101
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.8 bits (54), Expect = 6.8
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 142 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSNDQWWWT 14
V +PK I I++ F P S S C+Y S+D W T
Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 25.8 bits (54), Expect = 6.8
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 765 HPFSTLPTGTVPIPPI 718
H F LPTG++PI P+
Sbjct: 182 HDFLALPTGSLPITPL 197
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 25.4 bits (53), Expect = 9.0
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +3
Query: 507 PLLSLSCPFLDGTETTCWSFQPKCLGSRDGRWSVRKAKLTENASLKLSMPSCHLPAPLTS 686
PL L+ F T+T W+ PK L R R + A L N L + H P +S
Sbjct: 361 PLGELNWIFTAITDTIAWNVFPKHLFRRLFRQDLMVAALFRNFLLAERIMLVHSCHPQSS 420
Query: 687 P 689
P
Sbjct: 421 P 421
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,461,816
Number of Sequences: 5004
Number of extensions: 75309
Number of successful extensions: 272
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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