Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00286
         (766 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   1.5  
EF519472-1|ABP73553.1|  165|Anopheles gambiae CTLMA2 protein.          25   2.6  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   2.6  
EF519475-1|ABP73559.1|  165|Anopheles gambiae CTLMA2 protein.          25   3.4  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   5.9  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
 Frame = +3

Query: 558 WSFQPKCLGSRDGRWSVRKAKLTENASLKLSMPSCHLPAP--LTSPCVFPCKTYTKSVVL 731
           +SF P  L S      +   +L   +   L +PSC LP P  +  P   P     KS   
Sbjct: 73  FSFAPCTLASAT---EISLPELVTRSLSNLELPSCRLPCPNLIPRPAEVPTTPEHKSAAS 129

Query: 732 VPCPSAELK 758
             C  + L+
Sbjct: 130 SSCSLSTLE 138


>EF519472-1|ABP73553.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 684 SPCVFPCKTYTKSVVLVP 737
           +PC+ PCK + + V  +P
Sbjct: 23  NPCLCPCKPFEEKVYFIP 40


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 506  VVANLLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDE 396
            V+AN L V   FLL   K  L + W+  +    S+DE
Sbjct: 929  VMANALFVLVIFLLQLKKQELHIEWWFNVKNKISFDE 965


>EF519475-1|ABP73559.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 645 LSMPSCHLPAPLTSPCVFPCKTYTKSVVLVP 737
           LS P      P  +PC+ PCK + +    +P
Sbjct: 10  LSGPHTVDDIPQQNPCLCPCKPFEEKEYFIP 40


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 662 PPARPTDKPLRLP 700
           P +RPT KP RLP
Sbjct: 289 PRSRPTSKPKRLP 301


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 910,537
Number of Sequences: 2352
Number of extensions: 20798
Number of successful extensions: 88
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)