Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00286
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 180 8e-46
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 180 8e-46
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 180 8e-46
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 180 8e-46
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 109 3e-24
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 103 1e-22
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 103 1e-22
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 99 3e-21
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 55 6e-08
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 55 6e-08
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 49 3e-06
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 49 3e-06
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 49 3e-06
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 43 2e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 42 6e-04
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.17
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.7
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.7
U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonin... 29 4.8
U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase ... 29 4.8
U11280-4|AAM97951.2| 353|Caenorhabditis elegans Protein kinase ... 29 4.8
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 28 6.3
U88315-18|ABO16437.1| 99|Caenorhabditis elegans Hypothetical p... 28 6.3
U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical p... 28 6.3
U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical p... 28 6.3
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 8.4
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 8.4
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 180 bits (439), Expect = 8e-46
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE GITIDI
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
ALWKFET+KYY+TIIDAPGHRDFIK
Sbjct: 76 ALWKFETAKYYITIIDAPGHRDFIK 100
Score = 132 bits (320), Expect = 2e-31
Identities = 85/171 (49%), Positives = 99/171 (57%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 425
F +NMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQL V+
Sbjct: 98 FIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSP 154
Query: 426 TEPPYSEPRFEEIKKEVSSYIKKIGYNPLLSLSCPFLDGTETTCWSFQPKCLGSRDGRWS 605
T P S R + I++ + + +P D TETTC C GSRDG +
Sbjct: 155 TRSPDSSRRSDTIQR-----LFHLSQSP---------DSTETTCLRSPRTCHGSRDGLLN 200
Query: 606 VRKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKTYTKSVVLVPCPSAELK 758
RK L E S +L PS H A LT VF + T+S L P S L+
Sbjct: 201 ARKETLPERPSSRLLTPSSHHNAQLTDHSVFHSRMCTRSEELEPSQSDVLR 251
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 180 bits (439), Expect = 8e-46
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE GITIDI
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
ALWKFET+KYY+TIIDAPGHRDFIK
Sbjct: 76 ALWKFETAKYYITIIDAPGHRDFIK 100
Score = 156 bits (378), Expect = 2e-38
Identities = 69/86 (80%), Positives = 77/86 (89%)
Frame = +2
Query: 506 PAAVAFVPISGWHGDNMLELSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 685
P AV FVPISG++GDNMLE+S+ MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+
Sbjct: 151 PKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDR 210
Query: 686 PLRLPLQDVYKIGGIGTVPVGRVENG 763
PLRLPLQDVYKIGGIGTVPVGRVE G
Sbjct: 211 PLRLPLQDVYKIGGIGTVPVGRVETG 236
Score = 64.1 bits (149), Expect(2) = 3e-16
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = +3
Query: 396 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNP 509
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNP 151
Score = 38.7 bits (86), Expect(2) = 3e-16
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVA 305
F +NMITGTSQADCAVL+VA
Sbjct: 98 FIKNMITGTSQADCAVLVVA 117
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 180 bits (439), Expect = 8e-46
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE GITIDI
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
ALWKFET+KYY+TIIDAPGHRDFIK
Sbjct: 76 ALWKFETAKYYITIIDAPGHRDFIK 100
Score = 156 bits (378), Expect = 2e-38
Identities = 69/86 (80%), Positives = 77/86 (89%)
Frame = +2
Query: 506 PAAVAFVPISGWHGDNMLELSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 685
P AV FVPISG++GDNMLE+S+ MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+
Sbjct: 185 PKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDR 244
Query: 686 PLRLPLQDVYKIGGIGTVPVGRVENG 763
PLRLPLQDVYKIGGIGTVPVGRVE G
Sbjct: 245 PLRLPLQDVYKIGGIGTVPVGRVETG 270
Score = 154 bits (374), Expect = 6e-38
Identities = 74/88 (84%), Positives = 78/88 (88%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 425
F +NMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NKMDS
Sbjct: 98 FIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDS 157
Query: 426 TEPPYSEPRFEEIKKEVSSYIKKIGYNP 509
TEPP+SE RF EI EVS +IKKIGYNP
Sbjct: 158 TEPPFSEARFTEITNEVSGFIKKIGYNP 185
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 180 bits (439), Expect = 8e-46
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE GITIDI
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
ALWKFET+KYY+TIIDAPGHRDFIK
Sbjct: 76 ALWKFETAKYYITIIDAPGHRDFIK 100
Score = 156 bits (378), Expect = 2e-38
Identities = 69/86 (80%), Positives = 77/86 (89%)
Frame = +2
Query: 506 PAAVAFVPISGWHGDNMLELSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 685
P AV FVPISG++GDNMLE+S+ MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+
Sbjct: 185 PKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDR 244
Query: 686 PLRLPLQDVYKIGGIGTVPVGRVENG 763
PLRLPLQDVYKIGGIGTVPVGRVE G
Sbjct: 245 PLRLPLQDVYKIGGIGTVPVGRVETG 270
Score = 154 bits (374), Expect = 6e-38
Identities = 74/88 (84%), Positives = 78/88 (88%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 425
F +NMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NKMDS
Sbjct: 98 FIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDS 157
Query: 426 TEPPYSEPRFEEIKKEVSSYIKKIGYNP 509
TEPP+SE RF EI EVS +IKKIGYNP
Sbjct: 158 TEPPFSEARFTEITNEVSGFIKKIGYNP 185
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 109 bits (261), Expect = 3e-24
Identities = 49/52 (94%), Positives = 50/52 (96%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 156
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 103 bits (247), Expect = 1e-22
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERE G+T+DI
Sbjct: 179 VDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDI 238
Query: 181 ALWKFETSKYYVTIIDAPGHRDFI 252
FETS + ++DAPGH+DFI
Sbjct: 239 GRTSFETSHRRIVLLDAPGHKDFI 262
Score = 96.7 bits (230), Expect = 2e-20
Identities = 47/83 (56%), Positives = 61/83 (73%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 425
F NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+
Sbjct: 261 FISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDT 320
Query: 426 TEPPYSEPRFEEIKKEVSSYIKK 494
+ +S+ RF+EIK +S ++ +
Sbjct: 321 VD--WSQDRFDEIKNNLSVFLTR 341
Score = 54.4 bits (125), Expect = 8e-08
Identities = 27/81 (33%), Positives = 47/81 (58%)
Frame = +2
Query: 521 FVPISGWHGDNMLELSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLP 700
FVP+SG+ G+N+++ ++ W+ DG CL+E +D+ + P P+D PLR+
Sbjct: 350 FVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSDGPLRIG 396
Query: 701 LQDVYKIGGIGTVPVGRVENG 763
+ DV K+ V G++E+G
Sbjct: 397 ISDVLKVASNQLVVSGKIESG 417
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 103 bits (247), Expect = 1e-22
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERE G+T+DI
Sbjct: 197 VDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDI 256
Query: 181 ALWKFETSKYYVTIIDAPGHRDFI 252
FETS + ++DAPGH+DFI
Sbjct: 257 GRTSFETSHRRIVLLDAPGHKDFI 280
Score = 96.7 bits (230), Expect = 2e-20
Identities = 47/83 (56%), Positives = 61/83 (73%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 425
F NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+
Sbjct: 279 FISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDT 338
Query: 426 TEPPYSEPRFEEIKKEVSSYIKK 494
+ +S+ RF+EIK +S ++ +
Sbjct: 339 VD--WSQDRFDEIKNNLSVFLTR 359
Score = 54.4 bits (125), Expect = 8e-08
Identities = 27/81 (33%), Positives = 47/81 (58%)
Frame = +2
Query: 521 FVPISGWHGDNMLELSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLP 700
FVP+SG+ G+N+++ ++ W+ DG CL+E +D+ + P P+D PLR+
Sbjct: 368 FVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSDGPLRIG 414
Query: 701 LQDVYKIGGIGTVPVGRVENG 763
+ DV K+ V G++E+G
Sbjct: 415 ISDVLKVASNQLVVSGKIESG 435
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 99.1 bits (236), Expect = 3e-21
Identities = 43/88 (48%), Positives = 63/88 (71%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 425
F NMI G +QAD AVL+++A GEFE G + GQTREH++L T GVK L++ VNKMD
Sbjct: 200 FVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDD 259
Query: 426 TEPPYSEPRFEEIKKEVSSYIKKIGYNP 509
+ E RF+EI+ +++ +++K+G+NP
Sbjct: 260 PTVKWEEERFKEIEGKLTPFLRKLGFNP 287
Score = 91.9 bits (218), Expect = 5e-19
Identities = 40/84 (47%), Positives = 59/84 (70%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D ERE G T+++
Sbjct: 118 VDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEV 177
Query: 181 ALWKFETSKYYVTIIDAPGHRDFI 252
FET K + TI+DAPGH+ F+
Sbjct: 178 GRAYFETEKRHFTILDAPGHKSFV 201
Score = 35.9 bits (79), Expect = 0.032
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 626 GKCLIEALDAILPP-ARPTDKPLRLPLQDVYKIGGIGTVPVGRVENGC 766
G C IE +D +LP R + P+R + + Y +GTV +G++E+GC
Sbjct: 318 GPCFIEFIDVLLPSYKRDFNGPVRCTVAEKYS--EMGTVIIGKMESGC 363
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 54.8 bits (126), Expect = 6e-08
Identities = 35/96 (36%), Positives = 49/96 (51%)
Frame = +3
Query: 219 HH*CSWTQRFHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 398
H C F +NMI GTSQ D AVL++AA G E QT+EH +LA +GVK +
Sbjct: 112 HTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNM 164
Query: 399 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 506
+ +NK D E E + ++ E + G+N
Sbjct: 165 AIFINKADLVE----EDDLDLVEMEARELLSLHGFN 196
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1
Query: 133 LDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIK 255
+DK K E++ GITI++A +E+ + D PGH DFIK
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIK 123
Score = 32.3 bits (70), Expect = 0.39
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 578 PWFKGWQVERKEGKADGKC---LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVG 748
P +G + EG+ D C LI+ALD++ P R +P+ I G GTV VG
Sbjct: 201 PVIRGSALSALEGQ-DISCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVG 259
Query: 749 RVENG 763
+E G
Sbjct: 260 TLERG 264
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 54.8 bits (126), Expect = 6e-08
Identities = 35/96 (36%), Positives = 49/96 (51%)
Frame = +3
Query: 219 HH*CSWTQRFHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 398
H C F +NMI GTSQ D AVL++AA G E QT+EH +LA +GVK +
Sbjct: 112 HTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNM 164
Query: 399 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 506
+ +NK D E E + ++ E + G+N
Sbjct: 165 AIFINKADLVE----EDDLDLVEMEARELLSLHGFN 196
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1
Query: 133 LDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIK 255
+DK K E++ GITI++A +E+ + D PGH DFIK
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIK 123
Score = 32.3 bits (70), Expect = 0.39
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 578 PWFKGWQVERKEGKADGKC---LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVG 748
P +G + EG+ D C LI+ALD++ P R +P+ I G GTV VG
Sbjct: 201 PVIRGSALSALEGQ-DISCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVG 259
Query: 749 RVENG 763
+E G
Sbjct: 260 TLERG 264
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 49.2 bits (112), Expect = 3e-06
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Frame = +3
Query: 219 HH*CSWTQRFHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--K 392
H C + +NMITG +Q + A+L+VAA G QTREH LLA +GV
Sbjct: 116 HIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLD 168
Query: 393 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLLSLSCPFLDGT 545
++V +NK+D E P +E R E ++ ++ + + GY +CP + G+
Sbjct: 169 NIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGYP---GDTCPVIFGS 213
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 133 LDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIK 255
+D E+ GITI+ ++ET+K + ID PGH D+IK
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIK 127
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 49.2 bits (112), Expect = 3e-06
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Frame = +3
Query: 219 HH*CSWTQRFHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--K 392
H C + +NMITG +Q + A+L+VAA G QTREH LLA +GV
Sbjct: 117 HIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLD 169
Query: 393 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLLSLSCPFLDGT 545
++V +NK+D E P +E R E ++ ++ + + GY +CP + G+
Sbjct: 170 NIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGYP---GDTCPVIFGS 214
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 133 LDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIK 255
+D E+ GITI+ ++ET+K + ID PGH D+IK
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIK 128
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 49.2 bits (112), Expect = 3e-06
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Frame = +3
Query: 219 HH*CSWTQRFHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--K 392
H C + +NMITG +Q + A+L+VAA G QTREH LLA +GV
Sbjct: 117 HIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLD 169
Query: 393 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLLSLSCPFLDGT 545
++V +NK+D E P +E R E ++ ++ + + GY +CP + G+
Sbjct: 170 NIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGYP---GDTCPVIFGS 214
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 133 LDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIK 255
+D E+ GITI+ ++ET+K + ID PGH D+IK
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIK 128
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/73 (35%), Positives = 38/73 (52%)
Frame = +1
Query: 130 VLDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKT*SQEPLRLIALCSS*LP 309
+LDKL+ ERE GIT+ Y + +ID PGH DF S E R +A+C L
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDF----SAEVSRSLAVCDGILL 131
Query: 310 VPVNSKLVSLRTV 348
+ ++ V +T+
Sbjct: 132 LVAANQGVQAQTI 144
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/83 (36%), Positives = 40/83 (48%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VD+GK+T T L+Y G I A + KG+ V D L ERE GIT+
Sbjct: 34 VDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERERGITVQS 80
Query: 181 ALWKFETSKYYVTIIDAPGHRDF 249
A + + + +ID PGH DF
Sbjct: 81 AAVNLDWKGHRINLIDTPGHVDF 103
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/83 (33%), Positives = 39/83 (46%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
+DSGK+T T ++Y G ID E+ +G +D + ER+ GITI
Sbjct: 53 IDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQRGITIQS 102
Query: 181 ALWKFETSKYYVTIIDAPGHRDF 249
A + + IID PGH DF
Sbjct: 103 AATYVDWHGTNINIIDTPGHVDF 125
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 415 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 287
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 58 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 58 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonine
kinase protein.
Length = 982
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +3
Query: 402 VGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLLSLSCPFLDGTETTCWSFQPKCL 581
V + KM+ + E ++ +I KEVS ++ + + ++ FL +TTCW C+
Sbjct: 56 VAIKKMNFSGKQAVE-KWNDILKEVS-FLNTVVHPHIVDYKACFLK--DTTCWLVMEYCI 111
Query: 582 GS 587
GS
Sbjct: 112 GS 113
>U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase
protein 18, isoforma protein.
Length = 982
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +3
Query: 402 VGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLLSLSCPFLDGTETTCWSFQPKCL 581
V + KM+ + E ++ +I KEVS ++ + + ++ FL +TTCW C+
Sbjct: 56 VAIKKMNFSGKQAVE-KWNDILKEVS-FLNTVVHPHIVDYKACFLK--DTTCWLVMEYCI 111
Query: 582 GS 587
GS
Sbjct: 112 GS 113
>U11280-4|AAM97951.2| 353|Caenorhabditis elegans Protein kinase
protein 18, isoformb protein.
Length = 353
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +3
Query: 402 VGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLLSLSCPFLDGTETTCWSFQPKCL 581
V + KM+ + E ++ +I KEVS ++ + + ++ FL +TTCW C+
Sbjct: 56 VAIKKMNFSGKQAVE-KWNDILKEVS-FLNTVVHPHIVDYKACFLK--DTTCWLVMEYCI 111
Query: 582 GS 587
GS
Sbjct: 112 GS 113
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.3 bits (60), Expect = 6.3
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +3
Query: 258 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 437
++ ++ D A++I+ + AGI QT EH LLA ++I+ +NK D E
Sbjct: 89 VLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE-- 139
Query: 438 YSEPRFEEIKKEVSSYIKKIGY---NPLLSLS 524
+ + E K+V +K +G +P++ +S
Sbjct: 140 --KSKISESAKKVRKGLKSMGVDENSPIVEMS 169
>U88315-18|ABO16437.1| 99|Caenorhabditis elegans Hypothetical
protein C37H5.13c protein.
Length = 99
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 577 HFG*KLQHVVSVPSRNGHESDSSGL*PIFLMYEDTSFLISSNLGSLYGGSVESIL 413
HF + QHV S PSR+ D +G+ ++ T ++S + G +++ L
Sbjct: 18 HFAHRPQHVSSAPSRSMEIDDQNGVQHYPMLLNVTHIDMTSRADDIRAGLIDTFL 72
>U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical
protein C37H5.13b protein.
Length = 132
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 577 HFG*KLQHVVSVPSRNGHESDSSGL*PIFLMYEDTSFLISSNLGSLYGGSVESIL 413
HF + QHV S PSR+ D +G+ ++ T ++S + G +++ L
Sbjct: 51 HFAHRPQHVSSAPSRSMEIDDQNGVQHYPMLLNVTHIDMTSRADDIRAGLIDTFL 105
>U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical
protein C37H5.13a protein.
Length = 414
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 577 HFG*KLQHVVSVPSRNGHESDSSGL*PIFLMYEDTSFLISSNLGSLYGGSVESIL 413
HF + QHV S PSR+ D +G+ ++ T ++S + G +++ L
Sbjct: 51 HFAHRPQHVSSAPSRSMEIDDQNGVQHYPMLLNVTHIDMTSRADDIRAGLIDTFL 105
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 127 WVLDKLKAERELGITIDIALWKFETSKYYVTII 225
W+++KL R L +T W ++ YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 127 WVLDKLKAERELGITIDIALWKFETSKYYVTII 225
W+++KL R L +T W ++ YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 127 WVLDKLKAERELGITIDIALWKFETSKYYVTII 225
W+++KL R L +T W ++ YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,610,435
Number of Sequences: 27780
Number of extensions: 435510
Number of successful extensions: 1339
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1327
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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