Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00286
(766 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 163 1e-40
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 163 1e-40
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 163 1e-40
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 163 1e-40
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 98 6e-21
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 94 1e-19
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 48 7e-06
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 47 1e-05
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 42 3e-04
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 42 3e-04
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 40 0.002
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 38 0.007
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 33 0.28
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 32 0.36
At5g13650.2 68418.m01585 elongation factor family protein contai... 32 0.48
At5g13650.1 68418.m01584 elongation factor family protein contai... 32 0.48
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 31 1.1
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 29 3.4
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.9
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 28 5.9
At1g18900.2 68414.m02353 pentatricopeptide (PPR) repeat-containi... 28 5.9
At1g18900.1 68414.m02352 pentatricopeptide (PPR) repeat-containi... 28 5.9
At5g19490.1 68418.m02322 repressor protein-related similar to re... 28 7.8
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 28 7.8
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 28 7.8
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 28 7.8
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 163 bits (396), Expect = 1e-40
Identities = 75/85 (88%), Positives = 78/85 (91%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE GITIDI
Sbjct: 16 VDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
ALWKFET+KYY T+IDAPGHRDFIK
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIK 100
Score = 140 bits (339), Expect = 9e-34
Identities = 66/88 (75%), Positives = 77/88 (87%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 425
F +NMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Query: 426 TEPPYSEPRFEEIKKEVSSYIKKIGYNP 509
T P YS+ R++EI KEVSSY+KK+GYNP
Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 104 bits (250), Expect = 6e-23
Identities = 53/86 (61%), Positives = 60/86 (69%)
Frame = +2
Query: 506 PAAVAFVPISGWHGDNMLELSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 685
P + FVPISG+ GDNM+E ST + W+KG L+EALD I P RP+DK
Sbjct: 185 PDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDK 232
Query: 686 PLRLPLQDVYKIGGIGTVPVGRVENG 763
PLRLPLQDVYKIGGIGTVPVGRVE G
Sbjct: 233 PLRLPLQDVYKIGGIGTVPVGRVETG 258
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 163 bits (396), Expect = 1e-40
Identities = 75/85 (88%), Positives = 78/85 (91%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE GITIDI
Sbjct: 16 VDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
ALWKFET+KYY T+IDAPGHRDFIK
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIK 100
Score = 140 bits (339), Expect = 9e-34
Identities = 66/88 (75%), Positives = 77/88 (87%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 425
F +NMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Query: 426 TEPPYSEPRFEEIKKEVSSYIKKIGYNP 509
T P YS+ R++EI KEVSSY+KK+GYNP
Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 104 bits (250), Expect = 6e-23
Identities = 53/86 (61%), Positives = 60/86 (69%)
Frame = +2
Query: 506 PAAVAFVPISGWHGDNMLELSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 685
P + FVPISG+ GDNM+E ST + W+KG L+EALD I P RP+DK
Sbjct: 185 PDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDK 232
Query: 686 PLRLPLQDVYKIGGIGTVPVGRVENG 763
PLRLPLQDVYKIGGIGTVPVGRVE G
Sbjct: 233 PLRLPLQDVYKIGGIGTVPVGRVETG 258
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 163 bits (396), Expect = 1e-40
Identities = 75/85 (88%), Positives = 78/85 (91%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE GITIDI
Sbjct: 16 VDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
ALWKFET+KYY T+IDAPGHRDFIK
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIK 100
Score = 140 bits (339), Expect = 9e-34
Identities = 66/88 (75%), Positives = 77/88 (87%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 425
F +NMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Query: 426 TEPPYSEPRFEEIKKEVSSYIKKIGYNP 509
T P YS+ R++EI KEVSSY+KK+GYNP
Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 104 bits (250), Expect = 6e-23
Identities = 53/86 (61%), Positives = 60/86 (69%)
Frame = +2
Query: 506 PAAVAFVPISGWHGDNMLELSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 685
P + FVPISG+ GDNM+E ST + W+KG L+EALD I P RP+DK
Sbjct: 185 PDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDK 232
Query: 686 PLRLPLQDVYKIGGIGTVPVGRVENG 763
PLRLPLQDVYKIGGIGTVPVGRVE G
Sbjct: 233 PLRLPLQDVYKIGGIGTVPVGRVETG 258
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 163 bits (396), Expect = 1e-40
Identities = 75/85 (88%), Positives = 78/85 (91%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE GITIDI
Sbjct: 16 VDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDI 75
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
ALWKFET+KYY T+IDAPGHRDFIK
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIK 100
Score = 140 bits (339), Expect = 9e-34
Identities = 66/88 (75%), Positives = 77/88 (87%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 425
F +NMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Query: 426 TEPPYSEPRFEEIKKEVSSYIKKIGYNP 509
T P YS+ R++EI KEVSSY+KK+GYNP
Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 104 bits (250), Expect = 6e-23
Identities = 53/86 (61%), Positives = 60/86 (69%)
Frame = +2
Query: 506 PAAVAFVPISGWHGDNMLELSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 685
P + FVPISG+ GDNM+E ST + W+KG L+EALD I P RP+DK
Sbjct: 185 PDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDK 232
Query: 686 PLRLPLQDVYKIGGIGTVPVGRVENG 763
PLRLPLQDVYKIGGIGTVPVGRVE G
Sbjct: 233 PLRLPLQDVYKIGGIGTVPVGRVETG 258
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 97.9 bits (233), Expect = 6e-21
Identities = 41/84 (48%), Positives = 62/84 (73%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+ ERE GIT+ +
Sbjct: 248 VDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAEERERGITMTV 307
Query: 181 ALWKFETSKYYVTIIDAPGHRDFI 252
A+ F + +++V ++D+PGH+DF+
Sbjct: 308 AVAYFNSKRHHVVLLDSPGHKDFV 331
Score = 77.4 bits (182), Expect = 1e-14
Identities = 40/83 (48%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +3
Query: 246 FHQNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQTREHALLAFTLGVKQLIVGVNKMD 422
F NMI G +QAD A+L++ A G FEAG GQTREHA + GV+Q+IV +NKMD
Sbjct: 330 FVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQTREHARVLRGFGVEQVIVAINKMD 389
Query: 423 STEPPYSEPRFEEIKKEVSSYIK 491
YS+ RF+ IK+ V S+++
Sbjct: 390 IV--GYSKERFDLIKQHVGSFLQ 410
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 626 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPV-GRVENG 763
G CL++A+D++ P R KPL +P+ D + G V G++E G
Sbjct: 447 GPCLLDAVDSVKSPDRDVSKPLLMPICDAVRSTSQGQVSACGKLEAG 493
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 93.9 bits (223), Expect = 1e-19
Identities = 44/84 (52%), Positives = 60/84 (71%)
Frame = +3
Query: 255 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEP 434
NMI+G SQAD VL+++A GEFE G + GQTREH LA TLGV +LIV VNKMD
Sbjct: 195 NMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTV 254
Query: 435 PYSEPRFEEIKKEVSSYIKKIGYN 506
+S+ R++EI++++ ++K GYN
Sbjct: 255 NWSKERYDEIEQKMVPFLKASGYN 278
Score = 76.6 bits (180), Expect = 2e-14
Identities = 33/84 (39%), Positives = 55/84 (65%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D + ER G T+++
Sbjct: 110 VDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEV 169
Query: 181 ALWKFETSKYYVTIIDAPGHRDFI 252
FET TI+DAPGH+ ++
Sbjct: 170 GRAHFETESTRFTILDAPGHKSYV 193
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +2
Query: 515 VAFVPISGWHGDNMLELSTK--MPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 688
V F+PISG G NM + + PW W G E LD+I P R + P
Sbjct: 283 VVFLPISGLMGKNMDQRMGQEICPW---W---------SGPSFFEVLDSIEIPPRDPNGP 330
Query: 689 LRLPLQDVYKIGGIGTVPVGRVENG 763
R+P+ D +K +GTV +G+VE+G
Sbjct: 331 FRMPIIDKFK--DMGTVVMGKVESG 353
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +2
Query: 635 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVENG 763
L++A+D +P P R DKP +P++DV+ I G GTV GR+E G
Sbjct: 249 LMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQG 292
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/91 (32%), Positives = 45/91 (49%)
Frame = +3
Query: 219 HH*CSWTQRFHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 398
H C + +NMITG +Q D +L+V+ G QT+EH LLA +GV L
Sbjct: 134 HVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHILLARQVGVPSL 186
Query: 399 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 491
+ +NK+D + P E +E+ S+ K
Sbjct: 187 VCFLNKVDVVDDPELLELVEMELRELLSFYK 217
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 133 LDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIK 255
+DK E++ GITI A ++ET+K + +D PGH D++K
Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVK 145
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +3
Query: 219 HH*CSWTQRFHQNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 398
H C + +NMITG +Q D A+L+V+ G QT+EH LLA +GV +
Sbjct: 146 HVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPDM 198
Query: 399 IVGVNKMDSTEPPYSEPRFE-EIKKEVSSY 485
+V +NK D + E E+++ +SSY
Sbjct: 199 VVFLNKEDQVDDAELLELVELEVRELLSSY 228
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 635 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVENG 763
L++A+D +P P R T+ P L ++DV+ I G GTV GRVE G
Sbjct: 269 LMDAVDDYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVERG 312
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/85 (29%), Positives = 38/85 (44%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VD GK+T T L I +K+++ +D ER GITI+
Sbjct: 88 VDHGKTTLTAALTMALASIGSSVAKKYDE---------------IDAAPEERARGITINT 132
Query: 181 ALWKFETSKYYVTIIDAPGHRDFIK 255
A ++ET + +D PGH D++K
Sbjct: 133 ATVEYETENRHYAHVDCPGHADYVK 157
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/83 (37%), Positives = 41/83 (49%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
+DSGK+T T +++ G I E E ++ G G+ +D + ERE GITI
Sbjct: 74 IDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLEREKGITIQS 123
Query: 181 ALWKFETSKYYVTIIDAPGHRDF 249
A Y V IID PGH DF
Sbjct: 124 AATYCTWKDYKVNIIDTPGHVDF 146
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/83 (37%), Positives = 41/83 (49%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
+DSGK+T T +++ G I E E ++ G G+ +D + ERE GITI
Sbjct: 74 IDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLEREKGITIQS 123
Query: 181 ALWKFETSKYYVTIIDAPGHRDF 249
A Y V IID PGH DF
Sbjct: 124 AATYCTWKDYKVNIIDTPGHVDF 146
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/83 (32%), Positives = 41/83 (49%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
+D+GK+TTT ++Y G + E+ +G+ W ++ E+E GITI
Sbjct: 105 IDAGKTTTTERILYYTGR---------NYKIGEVHEGTATMDW----MEQEQERGITITS 151
Query: 181 ALWKFETSKYYVTIIDAPGHRDF 249
A K+ + IID PGH DF
Sbjct: 152 AATTTFWDKHRINIIDTPGHVDF 174
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 37.9 bits (84), Expect = 0.007
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +1
Query: 133 LDKLKAERELGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKT*SQEPLRLIALCSS 300
LD + ERE GITI + + +E + + + +ID PGH DF S E R +A C
Sbjct: 123 LDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDF----SYEVSRSLAACEG 178
Query: 301 *LPVPVNSKLVSLRTV 348
L V S+ V +T+
Sbjct: 179 ALLVVDASQGVEAQTL 194
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 32.7 bits (71), Expect = 0.28
Identities = 38/123 (30%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
+D GKST L+ G I K G G +Y LDKL+ ER + +
Sbjct: 75 IDHGKSTLADRLMELTGTIKK-------------GHGQPQY---LDKLQRERGITVKAQT 118
Query: 181 ALWKFET-------SKYYVTIIDAPGHRDFIKT*SQEPLRLIALCSS*LPVPVNSKLVSL 339
A +E S Y + +ID PGH DF S E R ++ C L V ++ V
Sbjct: 119 ATMFYENKVEDQEASGYLLNLIDTPGHVDF----SYEVSRSLSACQGALLVVDAAQGVQA 174
Query: 340 RTV 348
+TV
Sbjct: 175 QTV 177
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.3 bits (70), Expect = 0.36
Identities = 26/83 (31%), Positives = 36/83 (43%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERELGITIDI 180
VD GK+T HLI GG + GK F +D L E+ IT+
Sbjct: 18 VDHGKTTLADHLIASSGG--------GVLHPRLAGKLRF-----MDYLDEEQRRAITMKS 64
Query: 181 ALWKFETSKYYVTIIDAPGHRDF 249
+ + Y + +ID+PGH DF
Sbjct: 65 SSISLKYKDYSLNLIDSPGHMDF 87
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +1
Query: 130 VLDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDF 249
++D ERE GITI V IID PGH DF
Sbjct: 120 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDF 159
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +1
Query: 130 VLDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDF 249
++D ERE GITI V IID PGH DF
Sbjct: 119 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDF 158
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 608 KEGKADGKCLIEALDAILPPARPTDKP 688
KE +A G + +ALD +PP RP KP
Sbjct: 74 KEAEAKGVAMGQALDIAIPPPRPKRKP 100
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +3
Query: 228 CSWTQRFHQNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 404
C +H+ T Q +C + L+V TG F +KNG R+ LG + +
Sbjct: 228 CKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELENL 287
Query: 405 GVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 506
+DS E +E+++E S+ K++G N
Sbjct: 288 STFTLDSDEE-------DEVREE-SNVAKEVGLN 313
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 441 SEPR---FEEIKKEVSSYIKKIGYNPLLSLSCP 530
SEP+ FEE K+V ++K+ GYN + + P
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 557 LELSTKMPWFKGWQVERKEGKADGKCLIEALDA 655
++ T W KG++V EGK CL EA++A
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221
>At1g18900.2 68414.m02353 pentatricopeptide (PPR) repeat-containing
protein low similarity to 67kD chloroplastic RNA-binding
protein, P67 [Arabidopsis thaliana] GI:9755842; contains
Pfam profile PF01535: PPR repeat
Length = 860
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 531 FLDGTETTCWSFQPKCLGSRDGRWSVRKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKT 710
FL+G+ T+ C+ S D ++ +L + A PS LP P C+ P +
Sbjct: 18 FLNGSRTSVTDGN-SCVYSDDENCVSKRQQLRKEAGQTEKRPSSILPKPSVVGCILPGEV 76
Query: 711 YTKSVV 728
TK VV
Sbjct: 77 -TKPVV 81
>At1g18900.1 68414.m02352 pentatricopeptide (PPR) repeat-containing
protein low similarity to 67kD chloroplastic RNA-binding
protein, P67 [Arabidopsis thaliana] GI:9755842; contains
Pfam profile PF01535: PPR repeat
Length = 860
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 531 FLDGTETTCWSFQPKCLGSRDGRWSVRKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKT 710
FL+G+ T+ C+ S D ++ +L + A PS LP P C+ P +
Sbjct: 18 FLNGSRTSVTDGN-SCVYSDDENCVSKRQQLRKEAGQTEKRPSSILPKPSVVGCILPGEV 76
Query: 711 YTKSVV 728
TK VV
Sbjct: 77 -TKPVV 81
>At5g19490.1 68418.m02322 repressor protein-related similar to
repressor protein [Oryza sativa] GI:18481624
Length = 236
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 738 TVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMR 634
T + + +TSC RRG GR+ GR S S++
Sbjct: 92 TTQMHEVKHTSCGRGRRGRGRGRSSGRTGSGLSLK 126
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +3
Query: 258 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 437
M+ G + D A+L++AA QT EH + +K +I+ NK+D
Sbjct: 144 MLNGAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLKHIIILQNKIDLINEK 197
Query: 438 YSEPRFEEIKKEVSS 482
+ + E I+K +++
Sbjct: 198 AATEQHEAIQKFITN 212
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +3
Query: 258 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 437
M+ G + D A+L++AA QT EH + +K +I+ NK+D
Sbjct: 144 MLNGAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLKHIIILQNKIDLINEK 197
Query: 438 YSEPRFEEIKKEVSS 482
+ + E I+K +++
Sbjct: 198 AATEQHEAIQKFITN 212
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1184
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 324 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 482
E+G +TR+H G++ LI+ ++D E R E K VS+
Sbjct: 629 ESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSA 681
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,740,096
Number of Sequences: 28952
Number of extensions: 417809
Number of successful extensions: 1326
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1314
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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