Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00285
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 188 5e-48
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 178 4e-45
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 178 4e-45
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 144 5e-35
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 122 4e-28
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 122 4e-28
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 106 2e-23
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 98 5e-21
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 69 5e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 69 5e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 65 6e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 65 6e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 65 6e-11
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 39 0.003
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.29
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.29
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.29
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.29
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 32 0.39
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 1.2
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 2.1
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.7
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.7
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.7
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.7
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 6.3
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 28 6.3
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 8.4
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 28 8.4
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 28 8.4
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 188 bits (457), Expect = 5e-48
Identities = 105/170 (61%), Positives = 112/170 (65%)
Frame = +1
Query: 253 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 432
GKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQA 109
Query: 433 DCAVLIVAAGTGEFEAGISKNGQTRGMPCXXXXXXXXXXXXE*TKWIPLNHHTVSPDLRK 612
DCAVL+VA GTGEFEAGISKNGQTR + + L T SPD
Sbjct: 110 DCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV-------KQLVSLRSPTRSPD--- 159
Query: 613 SRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVR 762
+SRR T Q L D TETTC C GSRDG + R
Sbjct: 160 -------SSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNAR 202
Score = 106 bits (254), Expect = 2e-23
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 259
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 620
HALLA TLGVKQL V+ T P S R + I++
Sbjct: 136 HALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 178 bits (433), Expect = 4e-45
Identities = 81/85 (95%), Positives = 84/85 (98%)
Frame = +1
Query: 253 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 432
GKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQA 109
Query: 433 DCAVLIVAAGTGEFEAGISKNGQTR 507
DCAVL+VA GTGEFEAGISKNGQTR
Sbjct: 110 DCAVLVVACGTGEFEAGISKNGQTR 134
Score = 144 bits (348), Expect = 8e-35
Identities = 67/85 (78%), Positives = 72/85 (84%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 689
HALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG
Sbjct: 136 HALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISG 195
Query: 690 WHGDNMLEPSTKMPWFKGWQVERKE 764
++GDNMLE S+ MPWFKGW VERKE
Sbjct: 196 FNGDNMLEVSSNMPWFKGWAVERKE 220
Score = 106 bits (254), Expect = 2e-23
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 259
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 178 bits (433), Expect = 4e-45
Identities = 81/85 (95%), Positives = 84/85 (98%)
Frame = +1
Query: 253 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 432
GKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQA 109
Query: 433 DCAVLIVAAGTGEFEAGISKNGQTR 507
DCAVL+VA GTGEFEAGISKNGQTR
Sbjct: 110 DCAVLVVACGTGEFEAGISKNGQTR 134
Score = 144 bits (348), Expect = 8e-35
Identities = 67/85 (78%), Positives = 72/85 (84%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 689
HALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG
Sbjct: 136 HALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISG 195
Query: 690 WHGDNMLEPSTKMPWFKGWQVERKE 764
++GDNMLE S+ MPWFKGW VERKE
Sbjct: 196 FNGDNMLEVSSNMPWFKGWAVERKE 220
Score = 106 bits (254), Expect = 2e-23
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 259
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 144 bits (350), Expect = 5e-35
Identities = 65/68 (95%), Positives = 68/68 (100%)
Frame = +1
Query: 253 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 432
GKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQA 109
Query: 433 DCAVLIVA 456
DCAVL+VA
Sbjct: 110 DCAVLVVA 117
Score = 123 bits (297), Expect = 1e-28
Identities = 55/73 (75%), Positives = 61/73 (83%)
Frame = +3
Query: 546 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 725
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 726 MPWFKGWQVERKE 764
MPWFKGW VERKE
Sbjct: 174 MPWFKGWAVERKE 186
Score = 106 bits (254), Expect = 2e-23
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 259
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 122 bits (293), Expect = 4e-28
Identities = 54/86 (62%), Positives = 65/86 (75%)
Frame = +1
Query: 250 NGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 429
NGK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQ
Sbjct: 212 NGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQ 271
Query: 430 ADCAVLIVAAGTGEFEAGISKNGQTR 507
AD A+L+V A TGEFE G GQT+
Sbjct: 272 ADAAILVVNATTGEFETGFENGGQTK 297
Score = 61.7 bits (143), Expect = 6e-10
Identities = 32/79 (40%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPIS 686
HALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+S
Sbjct: 299 HALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVS 354
Query: 687 GWHGDNMLEPSTKMPWFKG 743
G+ G+N+++ ++ W+ G
Sbjct: 355 GFTGENLIK-RMELDWYDG 372
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +2
Query: 116 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA 244
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEA 209
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 122 bits (293), Expect = 4e-28
Identities = 54/86 (62%), Positives = 65/86 (75%)
Frame = +1
Query: 250 NGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 429
NGK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQ
Sbjct: 230 NGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQ 289
Query: 430 ADCAVLIVAAGTGEFEAGISKNGQTR 507
AD A+L+V A TGEFE G GQT+
Sbjct: 290 ADAAILVVNATTGEFETGFENGGQTK 315
Score = 61.7 bits (143), Expect = 6e-10
Identities = 32/79 (40%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPIS 686
HALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+S
Sbjct: 317 HALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVS 372
Query: 687 GWHGDNMLEPSTKMPWFKG 743
G+ G+N+++ ++ W+ G
Sbjct: 373 GFTGENLIK-RMELDWYDG 390
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +2
Query: 116 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA 244
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEA 227
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 106 bits (254), Expect = 2e-23
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 259
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 253 GKGSFKYAWVLDKLKAER 306
GKGSFKYAWVLDKLK +
Sbjct: 50 GKGSFKYAWVLDKLKVTK 67
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 98.3 bits (234), Expect = 5e-21
Identities = 45/99 (45%), Positives = 64/99 (64%)
Frame = +1
Query: 211 QTYHREVREGGPGNGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 390
+ Y RE +E G+ S+ +W +D ERE+G T+++ FET K + TI+DAPGH
Sbjct: 142 EKYEREAKE----KGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGH 197
Query: 391 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 507
+ F+ NMI G +QAD AVL+++A GEFE G + GQTR
Sbjct: 198 KSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTR 236
Score = 64.9 bits (151), Expect = 6e-11
Identities = 27/47 (57%), Positives = 37/47 (78%)
Frame = +2
Query: 110 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE 250
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKE 150
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPIS 686
H++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+NP + +VP S
Sbjct: 238 HSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCS 297
Query: 687 GWHGDNMLEPST--KMPWFKG 743
G G + + T + W+ G
Sbjct: 298 GLTGAFIKDRPTGSEGNWYSG 318
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 68.5 bits (160), Expect = 5e-12
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +1
Query: 283 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 462
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 463 TGEFE 477
G E
Sbjct: 143 DGVME 147
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 119 KTHINIVVIGHVDSGKSTTT 178
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 68.5 bits (160), Expect = 5e-12
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +1
Query: 283 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 462
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 463 TGEFE 477
G E
Sbjct: 143 DGVME 147
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 119 KTHINIVVIGHVDSGKSTTT 178
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +1
Query: 283 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 462
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 463 TG 468
G
Sbjct: 147 DG 148
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 113 KEKTHINIVVIGHVDSGKSTTT 178
++K H+N+ IGHVD GK+T T
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLT 66
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +1
Query: 283 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 462
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 463 TG 468
G
Sbjct: 148 DG 149
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 113 KEKTHINIVVIGHVDSGKSTTT 178
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +1
Query: 283 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 462
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 463 TG 468
G
Sbjct: 148 DG 149
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 113 KEKTHINIVVIGHVDSGKSTTT 178
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +1
Query: 280 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 459
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 460 GTG 468
G
Sbjct: 136 NQG 138
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 247
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 280 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 459
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 460 GTG 468
G
Sbjct: 124 SAG 126
Score = 34.3 bits (75), Expect = 0.096
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGI 208
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 238 GGPGNGKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMI 414
G +GK + A ++ A GIT I + E +K VT +D PGH F
Sbjct: 163 GHVDHGKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRA 222
Query: 415 TGTSQADCAVLIVAAGTG 468
G AD VL+VAA G
Sbjct: 223 RGAKGADIVVLVVAADDG 240
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +1
Query: 283 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 462
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 463 TG 468
G
Sbjct: 146 VG 147
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGID 211
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 283 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 453
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 283 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 453
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 202
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 319 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 468
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 286 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 450
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 451 VAAGTG 468
V A G
Sbjct: 232 VDAHEG 237
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 202
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 319 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 468
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 286 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 450
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 451 VAAGTG 468
V A G
Sbjct: 107 VDAHEG 112
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVKDPSNMLGYWTN 292
+I+ GH+D S GH +K GI E FE E ++ + P+ GY T+
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATS 1685
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 361 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 456
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 370 IIDAPGHRDFIKNMITGTSQADCAVLIV 453
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 628 PHTSRRLATTQLLSLSCPFLD 690
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 628 PHTSRRLATTQLLSLSCPFLD 690
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 628 PHTSRRLATTQLLSLSCPFLD 690
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 628 PHTSRRLATTQLLSLSCPFLD 690
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 128 INIVVIGHVDSGKSTTT 178
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 128 INIVVIGHVDSGKSTTT 178
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 101 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMVKD 262
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 101 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMVKD 262
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 101 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMVKD 262
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 364 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 459
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 101 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 193
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 101 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 193
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,567,983
Number of Sequences: 27780
Number of extensions: 395238
Number of successful extensions: 1296
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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