Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00285
(764 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 160 8e-40
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 160 8e-40
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 160 8e-40
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 160 8e-40
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 104 6e-23
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 87 2e-17
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 65 6e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 65 6e-11
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 45 6e-05
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 45 6e-05
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 43 2e-04
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 41 0.001
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 38 0.006
At5g13650.2 68418.m01585 elongation factor family protein contai... 36 0.022
At5g13650.1 68418.m01584 elongation factor family protein contai... 36 0.022
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 36 0.030
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 36 0.030
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 36 0.039
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.21
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 32 0.36
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 32 0.36
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 32 0.48
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 32 0.48
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 31 1.1
At5g17060.1 68418.m01999 ADP-ribosylation factor, putative simil... 30 1.9
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.9
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.9
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.9
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.6
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.6
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 3.4
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 5.9
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.9
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 7.8
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 160 bits (389), Expect = 8e-40
Identities = 74/84 (88%), Positives = 79/84 (94%)
Frame = +1
Query: 256 KGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 435
K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQAD
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 436 CAVLIVAAGTGEFEAGISKNGQTR 507
CAVLI+ + TG FEAGISK+GQTR
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTR 134
Score = 118 bits (284), Expect = 4e-27
Identities = 52/78 (66%), Positives = 64/78 (82%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 689
HALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISG 195
Query: 690 WHGDNMLEPSTKMPWFKG 743
+ GDNM+E ST + W+KG
Sbjct: 196 FEGDNMIERSTNLDWYKG 213
Score = 95.9 bits (228), Expect = 3e-20
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 259
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 160 bits (389), Expect = 8e-40
Identities = 74/84 (88%), Positives = 79/84 (94%)
Frame = +1
Query: 256 KGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 435
K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQAD
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 436 CAVLIVAAGTGEFEAGISKNGQTR 507
CAVLI+ + TG FEAGISK+GQTR
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTR 134
Score = 118 bits (284), Expect = 4e-27
Identities = 52/78 (66%), Positives = 64/78 (82%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 689
HALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISG 195
Query: 690 WHGDNMLEPSTKMPWFKG 743
+ GDNM+E ST + W+KG
Sbjct: 196 FEGDNMIERSTNLDWYKG 213
Score = 95.9 bits (228), Expect = 3e-20
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 259
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 160 bits (389), Expect = 8e-40
Identities = 74/84 (88%), Positives = 79/84 (94%)
Frame = +1
Query: 256 KGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 435
K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQAD
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 436 CAVLIVAAGTGEFEAGISKNGQTR 507
CAVLI+ + TG FEAGISK+GQTR
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTR 134
Score = 118 bits (284), Expect = 4e-27
Identities = 52/78 (66%), Positives = 64/78 (82%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 689
HALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISG 195
Query: 690 WHGDNMLEPSTKMPWFKG 743
+ GDNM+E ST + W+KG
Sbjct: 196 FEGDNMIERSTNLDWYKG 213
Score = 95.9 bits (228), Expect = 3e-20
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 259
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 160 bits (389), Expect = 8e-40
Identities = 74/84 (88%), Positives = 79/84 (94%)
Frame = +1
Query: 256 KGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 435
K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQAD
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 436 CAVLIVAAGTGEFEAGISKNGQTR 507
CAVLI+ + TG FEAGISK+GQTR
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTR 134
Score = 118 bits (284), Expect = 4e-27
Identities = 52/78 (66%), Positives = 64/78 (82%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 689
HALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISG 195
Query: 690 WHGDNMLEPSTKMPWFKG 743
+ GDNM+E ST + W+KG
Sbjct: 196 FEGDNMIERSTNLDWYKG 213
Score = 95.9 bits (228), Expect = 3e-20
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVK 259
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 104 bits (250), Expect = 6e-23
Identities = 45/86 (52%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 432
GKGSF YAW LD+ ERERGIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QA
Sbjct: 282 GKGSFAYAWALDESAEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQA 341
Query: 433 DCAVLIVAAGTGEFEAGISK-NGQTR 507
D A+L++ A G FEAG GQTR
Sbjct: 342 DAAILVIDASVGAFEAGFDNLKGQTR 367
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/42 (45%), Positives = 32/42 (76%)
Frame = +2
Query: 122 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQ 247
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAK 279
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 689
HA + GV+Q+IV +NKMD YS+ RF+ IK+ V S+++ + +++ ++P+S
Sbjct: 369 HARVLRGFGVEQVIVAINKMDIVG--YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSA 426
Query: 690 WHGDNML-EPSTK--MPWFKG 743
N++ PS W++G
Sbjct: 427 MENQNLVAAPSDNRLSSWYQG 447
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/99 (40%), Positives = 62/99 (62%)
Frame = +1
Query: 211 QTYHREVREGGPGNGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 390
Q Y +E ++ + S+ A+++D + ER +G T+++ FET TI+DAPGH
Sbjct: 134 QKYEKEAKD----KSRESWYMAYIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGH 189
Query: 391 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 507
+ ++ NMI+G SQAD VL+++A GEFE G + GQTR
Sbjct: 190 KSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTR 228
Score = 63.3 bits (147), Expect = 2e-10
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPIS 686
H LA TLGV +LIV VNKMD +S+ R++EI++++ ++K GYN V F+PIS
Sbjct: 230 HVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPIS 289
Query: 687 GWHGDNMLEPSTK--MPWFKG 743
G G NM + + PW+ G
Sbjct: 290 GLMGKNMDQRMGQEICPWWSG 310
Score = 58.8 bits (136), Expect = 4e-09
Identities = 23/49 (46%), Positives = 37/49 (75%)
Frame = +2
Query: 116 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMVKD 262
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ ++
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRE 146
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 64.9 bits (151), Expect = 6e-11
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +1
Query: 283 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 462
+D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 463 TG 468
G
Sbjct: 177 DG 178
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 104 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 238
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 64.9 bits (151), Expect = 6e-11
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = +1
Query: 283 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 462
+DK E++RGITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+
Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGP 164
Query: 463 TG 468
G
Sbjct: 165 DG 166
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 113 KEKTHINIVVIGHVDSGKSTTT 178
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 689
H LLA +GV L+ +NK+D + P E +E+ S+ K G + + +S
Sbjct: 174 HILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSALSA 233
Query: 690 WHGDN 704
G N
Sbjct: 234 LQGTN 238
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/75 (34%), Positives = 36/75 (48%)
Frame = +1
Query: 283 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 462
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 463 TGEFEAGISKNGQTR 507
G I+ + Q R
Sbjct: 168 GGVQSQSITVDRQMR 182
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGI 208
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/75 (34%), Positives = 36/75 (48%)
Frame = +1
Query: 283 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 462
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 463 TGEFEAGISKNGQTR 507
G I+ + Q R
Sbjct: 168 GGVQSQSITVDRQMR 182
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGI 208
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +1
Query: 283 LDKLKAERERGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 450
LD + ERERGITI + + +E + + + +ID PGH DF + + + A+L+
Sbjct: 123 LDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLV 182
Query: 451 VAAGTG 468
V A G
Sbjct: 183 VDASQG 188
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 229
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +1
Query: 283 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 462
+D L E+ R IT+ + + Y + +ID+PGH DF + T +D A+++V A
Sbjct: 49 MDYLDEEQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAV 108
Query: 463 TG 468
G
Sbjct: 109 EG 110
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGG 205
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +1
Query: 283 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 462
+D ++ E+ERGITI A K+ + IID PGH DF + D A+ + +
Sbjct: 136 MDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSV 195
Query: 463 TG 468
G
Sbjct: 196 AG 197
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 119 KTHINIVVIGHVDSGKSTTTGHLIYKCG 202
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 36.3 bits (80), Expect = 0.022
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +1
Query: 280 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 459
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 120 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 179
Query: 460 GTG 468
G
Sbjct: 180 VEG 182
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 36.3 bits (80), Expect = 0.022
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +1
Query: 280 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 459
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 119 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 178
Query: 460 GTG 468
G
Sbjct: 179 VEG 181
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +1
Query: 301 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 465
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 466 G 468
G
Sbjct: 245 G 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +1
Query: 301 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 465
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 466 G 468
G
Sbjct: 245 G 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 35.5 bits (78), Expect = 0.039
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Frame = +1
Query: 283 LDKLKAERERGITIDIALWKF---------ETSKYYVTIIDAPGHRDFIKNMITGTSQAD 435
LDKL +RERGIT+ E S Y + +ID PGH DF + S
Sbjct: 103 LDKL--QRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQ 160
Query: 436 CAVLIVAAGTG 468
A+L+V A G
Sbjct: 161 GALLVVDAAQG 171
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +2
Query: 104 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-----RTIEKFEKEAQEMVKDPS 268
K EK N +I H+D GKST L+ G I K + ++K ++E VK +
Sbjct: 60 KFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKKGHGQPQYLDKLQRERGITVKAQT 118
Query: 269 NMLGY 283
+ Y
Sbjct: 119 ATMFY 123
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 33.1 bits (72), Expect = 0.21
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +1
Query: 238 GGPGNGKGSFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDFIKNM 411
G +GK S A + A GIT + + S +T +D PGH F +
Sbjct: 226 GHVDHGKTSLLDALRNTSVAAREAGGITQHVGAFVVGMPDSGTSITFLDTPGHAAFSEMR 285
Query: 412 ITGTSQADCAVLIVAAGTG 468
G + D VL+VAA G
Sbjct: 286 ARGAAVTDIVVLVVAADDG 304
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 349 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 459
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 349 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 459
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 31.9 bits (69), Expect = 0.48
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 361 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 459
+V+ +D PGH + M+ G + D A+LI+AA
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +1
Query: 343 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 459
FE SK +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 528 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 689
T GV++ G+ + +S PP S R E++ E S++ Y+P V F +G
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVFSRANG 67
>At5g17060.1 68418.m01999 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster)
Length = 192
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 176 TGHLIYKCGGIDKRTIEKFEKEAQEMVKDP 265
T LIY +D+ I K ++E QE++KDP
Sbjct: 85 TDGLIYVVDSLDRERIGKAKQEFQEIIKDP 114
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 370 IIDAPGHRDFIKNMITGTSQADCAVLIV 453
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 370 IIDAPGHRDFIKNMITGTSQADCAVLIV 453
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 370 IIDAPGHRDFIKNMITGTSQADCAVLIV 453
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 352 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 453
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCG 202
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 364 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 453
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Frame = +1
Query: 289 KLKAERERGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 456
K+ A GIT I +K +D PGH F G D A+++VA
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 457 AGTG 468
A G
Sbjct: 585 ADDG 588
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 644 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 745
DW+ C AHF RR +GAF A G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 591 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 680
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 597 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 707
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,659,091
Number of Sequences: 28952
Number of extensions: 374631
Number of successful extensions: 1163
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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