Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00283
         (773 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.7  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   8.3  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.3  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 39   WTTATLPVTSETTASKLLPSARGRSLSGALQTSPGLSTRPKATSLHT 179
            WTT      S TT S    +   R  +    T+   +TRP  T+  T
Sbjct: 1035 WTTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPT 1081


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 9   KYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGALQTSP 140
           K P G+PS   T ++LP T  T+ S   P+   RS+  +  + P
Sbjct: 69  KSPQGAPSPSSTPSSLP-TQRTSTSN--PTYSSRSVMTSCSSVP 109


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -3

Query: 705 SQREMSCQLTWWLV*SFPSPQVRRSLYSP 619
           ++  + C L W++   F SP +  + Y P
Sbjct: 185 TRASLICLLAWFIAALFTSPILAITQYGP 213


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 668 SHHVSWQLISLWEDNNVIFKIL 733
           S  ++W++   W   NV+ KI+
Sbjct: 101 STDIAWRITVAWYAGNVLCKII 122


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +3

Query: 459 IKNAMSFAYKLWHEGHKTS 515
           +KN +S+ + L+H   K++
Sbjct: 280 VKNCLSYCFNLYHLASKSN 298


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +3

Query: 459 IKNAMSFAYKLWHEGHKTS 515
           +KN +S+ + L+H   K++
Sbjct: 280 VKNCLSYCFNLYHLASKSN 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,369
Number of Sequences: 336
Number of extensions: 3150
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)