Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00283
         (773 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0105 + 16693771-16693780,16693833-16693876,16694274-166943...    30   2.3  
06_01_0081 + 646100-646346,646432-646848,647067-647170,648152-64...    29   3.1  
07_03_0845 - 21979581-21981281                                         29   4.1  
08_02_1080 - 24197514-24199415                                         29   5.4  
05_01_0093 - 617515-619260                                             28   7.2  
03_01_0130 - 1007433-1007712,1007739-1007803,1007804-1008001,100...    28   7.2  
01_07_0150 + 41508546-41508636,41509384-41510343,41511082-415115...    28   9.5  

>06_03_0105 +
          16693771-16693780,16693833-16693876,16694274-16694348,
          16694548-16694784,16694880-16695050,16695137-16695250
          Length = 216

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 62 NWKCRCRPQTRRGSCWVF 9
          N+ CRCRP+ RR   W +
Sbjct: 5  NYVCRCRPENRRNKGWAY 22


>06_01_0081 + 646100-646346,646432-646848,647067-647170,648152-648352,
            649088-649798,649944-650674,650942-651017,651096-651182,
            651429-651517,651917-651973,652402-652510,652590-652649,
            652835-652919,653178-653242,653694-653753,653869-653913,
            654697-654800,654877-655099
          Length = 1156

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = -2

Query: 181  SVCNDVA--FGRVDNPGDVCSAPL 116
            S+CND+   F  +D PGD+ S+PL
Sbjct: 1111 SICNDLVQGFAAIDLPGDIFSSPL 1134


>07_03_0845 - 21979581-21981281
          Length = 566

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
 Frame = +2

Query: 593 QALKLDANVGEYNDRLTWGDGKDYT----SHHVSW----QLISLWEDNNVIFK 727
           Q   ++   GEY DR++W D +D      S+HV      Q +SLW  + V ++
Sbjct: 167 QRFGINKITGEYQDRVSWKDPEDPAPGPFSNHVDLIRLNQYVSLWNQSKVYWQ 219


>08_02_1080 - 24197514-24199415
          Length = 633

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 465 NAMSFAYKLWHEGHKTSSKITSRANSNSYSTN 560
           N +SF+ +         +K+TS+ NSNSYS N
Sbjct: 540 NELSFSGRRKSHSGVAKNKVTSKINSNSYSGN 571


>05_01_0093 - 617515-619260
          Length = 581

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 80  VKTVTISTGPITKRCAADVARIVNASEGYVVA 175
           V T+T  + P T  CAA ++R ++ +  YVVA
Sbjct: 52  VVTLTAHSRPYTAACAASLSRRLSRTRDYVVA 83


>03_01_0130 -
           1007433-1007712,1007739-1007803,1007804-1008001,
           1008103-1008273,1008405-1008553,1008780-1008927,
           1009015-1009083,1009168-1009416,1009516-1009710,
           1009869-1009985,1010205-1011329
          Length = 921

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 587 YNQALKLDANVGEYNDRLTWGDGKDYTSHHVSWQLISLWEDN 712
           Y  A  L A  G+ ND L   +  D+T   + W  +SLW ++
Sbjct: 795 YTWANMLSAPRGQVNDPLITQNSTDFTVALMDWFWMSLWAEH 836


>01_07_0150 +
           41508546-41508636,41509384-41510343,41511082-41511555,
           41511642-41511736
          Length = 539

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 695 SLWEDNNVIFKILNTEYEM 751
           ++W DN V + +LN EYE+
Sbjct: 250 TVWTDNKVCYNVLNGEYEI 268


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,249,899
Number of Sequences: 37544
Number of extensions: 377526
Number of successful extensions: 1234
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)