Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00281
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative guan... 112 2e-25
AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical ... 112 2e-25
AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical ... 112 2e-25
Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z81461-5|CAB62797.1| 202|Caenorhabditis elegans Hypothetical pr... 29 2.8
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 29 2.8
U29612-1|AAA68801.1| 387|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 29 2.8
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 29 3.7
U80842-11|AAB37941.2| 231|Caenorhabditis elegans Hypothetical p... 28 6.4
Z66522-6|CAH04737.1| 1147|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z49936-5|CAE47467.1| 801|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical pr... 28 8.5
AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and inte... 28 8.5
AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and inte... 28 8.5
>AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative
guanylate-binding protein protein.
Length = 573
Score = 112 bits (270), Expect = 2e-25
Identities = 49/85 (57%), Positives = 65/85 (76%)
Frame = +1
Query: 1 QIYNLKENLQEDDLQYLQLFTEYGKLLKNEDGSKAFQMLMFLIRDWPYYYEHAFGAKGGE 180
QIYNL +N+QEDDLQ+LQLFTEYG+L + SK FQ L+FL+RDW + YE FG +GG+
Sbjct: 185 QIYNLSQNIQEDDLQHLQLFTEYGRLALEDSASKPFQSLLFLVRDWSFPYEAEFGFQGGQ 244
Query: 181 ELLKKRLEITDKMPKELCDLREHIR 255
+L +RLE+++K EL LR+HIR
Sbjct: 245 RVLDRRLEVSEKQHAELQQLRQHIR 269
Score = 81.0 bits (191), Expect = 9e-16
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 SCFDKVSCFLMPHPGFKVS-NPSYNGNFSELSTEFRNALKELVPSIFAPENLNIKKINGV 431
SCF+ + CFLMPHPG KV+ NP+++G ++ EF+ L ++P + L K+ING
Sbjct: 270 SCFEDIRCFLMPHPGLKVATNPNFDGKLVDIENEFQQQLGVMIPRLLDSHALVHKEINGQ 329
Query: 432 KVTCADMYTYFQTYMTAFNSDSMITP 509
K+TC ++ YF+ YM F + P
Sbjct: 330 KMTCRELLEYFKAYMHIFRGQDLPEP 355
>AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical
protein Y54G2A.2b protein.
Length = 535
Score = 112 bits (270), Expect = 2e-25
Identities = 49/85 (57%), Positives = 65/85 (76%)
Frame = +1
Query: 1 QIYNLKENLQEDDLQYLQLFTEYGKLLKNEDGSKAFQMLMFLIRDWPYYYEHAFGAKGGE 180
QIYNL +N+QEDDLQ+LQLFTEYG+L + SK FQ L+FL+RDW + YE FG +GG+
Sbjct: 185 QIYNLSQNIQEDDLQHLQLFTEYGRLALEDSASKPFQSLLFLVRDWSFPYEAEFGFQGGQ 244
Query: 181 ELLKKRLEITDKMPKELCDLREHIR 255
+L +RLE+++K EL LR+HIR
Sbjct: 245 RVLDRRLEVSEKQHAELQQLRQHIR 269
Score = 81.0 bits (191), Expect = 9e-16
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 SCFDKVSCFLMPHPGFKVS-NPSYNGNFSELSTEFRNALKELVPSIFAPENLNIKKINGV 431
SCF+ + CFLMPHPG KV+ NP+++G ++ EF+ L ++P + L K+ING
Sbjct: 270 SCFEDIRCFLMPHPGLKVATNPNFDGKLVDIENEFQQQLGVMIPRLLDSHALVHKEINGQ 329
Query: 432 KVTCADMYTYFQTYMTAFNSDSMITP 509
K+TC ++ YF+ YM F + P
Sbjct: 330 KMTCRELLEYFKAYMHIFRGQDLPEP 355
>AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical
protein Y54G2A.2a protein.
Length = 573
Score = 112 bits (270), Expect = 2e-25
Identities = 49/85 (57%), Positives = 65/85 (76%)
Frame = +1
Query: 1 QIYNLKENLQEDDLQYLQLFTEYGKLLKNEDGSKAFQMLMFLIRDWPYYYEHAFGAKGGE 180
QIYNL +N+QEDDLQ+LQLFTEYG+L + SK FQ L+FL+RDW + YE FG +GG+
Sbjct: 185 QIYNLSQNIQEDDLQHLQLFTEYGRLALEDSASKPFQSLLFLVRDWSFPYEAEFGFQGGQ 244
Query: 181 ELLKKRLEITDKMPKELCDLREHIR 255
+L +RLE+++K EL LR+HIR
Sbjct: 245 RVLDRRLEVSEKQHAELQQLRQHIR 269
Score = 81.0 bits (191), Expect = 9e-16
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 SCFDKVSCFLMPHPGFKVS-NPSYNGNFSELSTEFRNALKELVPSIFAPENLNIKKINGV 431
SCF+ + CFLMPHPG KV+ NP+++G ++ EF+ L ++P + L K+ING
Sbjct: 270 SCFEDIRCFLMPHPGLKVATNPNFDGKLVDIENEFQQQLGVMIPRLLDSHALVHKEINGQ 329
Query: 432 KVTCADMYTYFQTYMTAFNSDSMITP 509
K+TC ++ YF+ YM F + P
Sbjct: 330 KMTCRELLEYFKAYMHIFRGQDLPEP 355
>Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical
protein Y41E3.3 protein.
Length = 520
Score = 76.6 bits (180), Expect = 2e-14
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 FDKVSCFLMPHPGFKVSN-PSYNGNFSELSTEFRNALKELVPSIFAPENLNIKKINGVKV 437
F+ + C+L+PHPG+KV+ S+ G+ +L FR LK++VP++ P L K +NG V
Sbjct: 266 FEDIQCYLLPHPGYKVAERQSFRGHVKDLRPLFREELKKMVPNLLGPHILKPKIVNGKTV 325
Query: 438 TCADMYTYFQTYMTAFNSDSMITP 509
TC M YF+ Y +F+ +++ P
Sbjct: 326 TCRKMIQYFKEYAASFDGETLPQP 349
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 QIYNLKENLQEDDLQYLQLFTEYGKLLKNEDGS--KAFQMLMFLIRDWPYYYEHAFGAKG 174
QIYN+ +N+QED LQ+L LF EYG++ + + K FQ L+F +RD+ E+ FG G
Sbjct: 177 QIYNVVDNIQEDALQHLSLFVEYGRIAMEQPHNFGKPFQQLVFCVRDFKNQEEYEFGENG 236
Query: 175 GEELLKKRLEITDKMPKELCDLREHIR 255
G + L L+ + P+E+ +RE +R
Sbjct: 237 GTDFLDNVLQTNPEQPEEIKQVRELLR 263
>Z81461-5|CAB62797.1| 202|Caenorhabditis elegans Hypothetical
protein C04F12.7 protein.
Length = 202
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 639 RTPSPGILGVSVLHAASMIFVYLLVASRIAAINAALLVFSKI 514
+TPS G L + HA + + + V S IA A++ VF ++
Sbjct: 106 KTPSTGTLNSDICHAVNGVTLVCAVISMIATALASMAVFIRL 147
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = -3
Query: 649 MSNTNSFTWHTWRVG-IARSIHDLRVLTGSFPNS 551
+++TNS+T+HT +V ++ S ++R+ TGS NS
Sbjct: 526 LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNS 559
>U29612-1|AAA68801.1| 387|Caenorhabditis elegans Hypothetical
protein C09B8.3 protein.
Length = 387
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = -3
Query: 520 EDTAGVIIES-----LLKAVI*VWKYVYISAHVTLTPFIFFIFKFSGANIDGTSSLRAFL 356
ED +G ++S L + VI W YV I V +T F+ F F S A +
Sbjct: 203 EDGSGTTLDSSSPSNLTETVIPTWMYVVIVICVVVTVFVLVFFVFFIIKYIKNHSKSAQI 262
Query: 355 NSVESSEK 332
+ES++K
Sbjct: 263 YPIESNQK 270
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = -3
Query: 649 MSNTNSFTWHTWRVG-IARSIHDLRVLTGSFPNS 551
+++TNS+T+HT +V ++ S ++R+ TGS NS
Sbjct: 526 LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNS 559
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Frame = +2
Query: 506 SSSIFENTKRAALMAAIREATSKYTKIMDAACNTDTPS--------MPGEGVRVTHNQAL 661
SSS N A MAA +A S T A+ +T TPS P V T +QA
Sbjct: 2836 SSSSTANVASMAAMAAAAQAASTPTTSKQASASTSTPSTSAVASAQTPSTSVPSTSSQAA 2895
Query: 662 AKAIEAFN 685
A A + N
Sbjct: 2896 AAAASSAN 2903
>U80842-11|AAB37941.2| 231|Caenorhabditis elegans Hypothetical
protein ZC239.4 protein.
Length = 231
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 599 CNTDTPSMPGEGVRVTHNQALAKAIEAFN 685
CNT P+ G+ R+ ++ L K IEA++
Sbjct: 194 CNTKAPTFEGQMKRLNYSDRLEKYIEAYS 222
>Z66522-6|CAH04737.1| 1147|Caenorhabditis elegans Hypothetical
protein F14E5.2b protein.
Length = 1147
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 569 SKYTKIMDA-ACNTDTPSMPGEGVRVTHNQALAKAIEAFNKKRENGLTKRD 718
+K I+D CN TP +GVRV H Q +A +K +N T+ D
Sbjct: 163 TKCRAILDKFKCNVLTPDPAHKGVRVAHTQGMALEC-ILDKVVKNAKTQAD 212
>Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical
protein F14E5.2a protein.
Length = 1149
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 569 SKYTKIMDA-ACNTDTPSMPGEGVRVTHNQALAKAIEAFNKKRENGLTKRD 718
+K I+D CN TP +GVRV H Q +A +K +N T+ D
Sbjct: 163 TKCRAILDKFKCNVLTPDPAHKGVRVAHTQGMALEC-ILDKVVKNAKTQAD 212
>Z49936-5|CAE47467.1| 801|Caenorhabditis elegans Hypothetical
protein F13B10.1e protein.
Length = 801
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 503 NSSSIFENTKRAALMAAIREATSKYTKIMDAA 598
N S+ NT++ A+M ++ SKY +MD A
Sbjct: 60 NPSTKMSNTEQVAMMHTLKTKLSKYQAMMDKA 91
>Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical
protein F13B10.1c protein.
Length = 1000
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 503 NSSSIFENTKRAALMAAIREATSKYTKIMDAA 598
N S+ NT++ A+M ++ SKY +MD A
Sbjct: 243 NPSTKMSNTEQVAMMHTLKTKLSKYQAMMDKA 274
>Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical
protein F13B10.1a protein.
Length = 930
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 503 NSSSIFENTKRAALMAAIREATSKYTKIMDAA 598
N S+ NT++ A+M ++ SKY +MD A
Sbjct: 189 NPSTKMSNTEQVAMMHTLKTKLSKYQAMMDKA 220
>AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform c protein.
Length = 984
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 503 NSSSIFENTKRAALMAAIREATSKYTKIMDAA 598
N S+ NT++ A+M ++ SKY +MD A
Sbjct: 243 NPSTKMSNTEQVAMMHTLKTKLSKYQAMMDKA 274
>AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform a protein.
Length = 931
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 503 NSSSIFENTKRAALMAAIREATSKYTKIMDAA 598
N S+ NT++ A+M ++ SKY +MD A
Sbjct: 190 NPSTKMSNTEQVAMMHTLKTKLSKYQAMMDKA 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,390,395
Number of Sequences: 27780
Number of extensions: 343522
Number of successful extensions: 924
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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