Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00280
(745 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00005A3B99 Cluster: PREDICTED: similar to epsilon su... 95 2e-18
UniRef50_A6NKA3 Cluster: Uncharacterized protein COPE; n=10; Deu... 93 7e-18
UniRef50_O14579 Cluster: Coatomer subunit epsilon; n=42; Eumetaz... 90 5e-17
UniRef50_Q7Q558 Cluster: ENSANGP00000011535; n=1; Anopheles gamb... 75 1e-12
UniRef50_Q55FU2 Cluster: Putative uncharacterized protein; n=1; ... 70 7e-11
UniRef50_Q9Y0Y5 Cluster: CG9543-PA; n=3; Sophophora|Rep: CG9543-... 65 2e-09
UniRef50_O64748 Cluster: Coatomer subunit epsilon-2; n=12; Magno... 64 3e-09
UniRef50_Q5DEQ9 Cluster: SJCHGC01641 protein; n=2; Schistosoma j... 55 2e-06
UniRef50_O62246 Cluster: Probable coatomer subunit epsilon; n=2;... 54 4e-06
UniRef50_Q01CY6 Cluster: Coatomer epsilon subunit; n=2; Ostreoco... 52 1e-05
UniRef50_Q6QP55 Cluster: Epsilon-COP; n=1; Zea mays|Rep: Epsilon... 52 2e-05
UniRef50_A5B6P3 Cluster: Putative uncharacterized protein; n=1; ... 50 5e-05
UniRef50_A2EB98 Cluster: Coatomer epsilon subunit family protein... 44 0.003
UniRef50_UPI000023D00F Cluster: hypothetical protein FG01539.1; ... 35 1.8
UniRef50_Q4Q5A7 Cluster: Coatomer epsilon subunit, putative; n=3... 35 1.8
UniRef50_Q5KID6 Cluster: Expressed protein; n=1; Filobasidiella ... 35 2.4
UniRef50_A5DA23 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_A4H504 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_Q4KKC5 Cluster: Heamin storage system, HmsH protein; n=... 33 9.8
UniRef50_A5VFL2 Cluster: Peptidoglycan-binding LysM precursor; n... 33 9.8
UniRef50_A4BRM1 Cluster: Putative uncharacterized protein; n=1; ... 33 9.8
>UniRef50_UPI00005A3B99 Cluster: PREDICTED: similar to epsilon
subunit of coatomer protein complex isoform a isoform 3;
n=2; Eutheria|Rep: PREDICTED: similar to epsilon subunit
of coatomer protein complex isoform a isoform 3 - Canis
familiaris
Length = 279
Score = 95.1 bits (226), Expect = 2e-18
Identities = 44/81 (54%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
Frame = +3
Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191
+VDELFDVKNAFY+G+YQQ INEAQ V PS+P ++RD FLYR+Y+AQ Y +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKPSSPERDVERDVFLYRAYLAQRKYGVVLDEIK 74
Query: 192 -TADPMLQPLKSLVDYLLPDA 251
++ P LQ ++ +YL D+
Sbjct: 75 PSSAPELQAVRMFAEYLANDS 95
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/55 (34%), Positives = 35/55 (63%)
Frame = +2
Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAAL 376
A+ F L Q +IV ++D +++ +++N FL++AA+IY+H+ N +AAL
Sbjct: 83 AVRMFAEYLANDSQRDSIVVELDREMSRSVDVTNTTFLLMAASIYFHDQNPDAAL 137
>UniRef50_A6NKA3 Cluster: Uncharacterized protein COPE; n=10;
Deuterostomia|Rep: Uncharacterized protein COPE - Homo
sapiens (Human)
Length = 257
Score = 93.1 bits (221), Expect = 7e-18
Identities = 43/93 (46%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Frame = +3
Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 192 -TADPMLQPLKSLVDYLLPDANNLPLSLILMLE 287
++ P LQ ++ DYL ++ + +++ ++L+
Sbjct: 75 PSSAPELQAVRMFADYLAHESRSTAMTVQILLK 107
Score = 41.5 bits (93), Expect = 0.021
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +2
Query: 413 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508
A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 99 AMTVQILLKLDRLDLARKELKRMQDLDEDATL 130
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +1
Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690
QLA AW++L GG +QDA+Y E+++ WE AE L +
Sbjct: 132 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 190
Query: 691 AASRAPQHADLLLGL 735
A + + + L+ L
Sbjct: 191 ALDKDSGYPETLVNL 205
>UniRef50_O14579 Cluster: Coatomer subunit epsilon; n=42;
Eumetazoa|Rep: Coatomer subunit epsilon - Homo sapiens
(Human)
Length = 308
Score = 90.2 bits (214), Expect = 5e-17
Identities = 42/99 (42%), Positives = 68/99 (68%)
Frame = +2
Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391
A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181
Score = 89.4 bits (212), Expect = 8e-17
Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +3
Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 192 -TADPMLQPLKSLVDYL 239
++ P LQ ++ DYL
Sbjct: 75 PSSAPELQAVRMFADYL 91
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +1
Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690
QLA AW++L GG +QDA+Y E+++ WE AE L +
Sbjct: 183 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 241
Query: 691 AASRAPQHADLLLGL 735
A + + + L+ L
Sbjct: 242 ALDKDSGYPETLVNL 256
>UniRef50_Q7Q558 Cluster: ENSANGP00000011535; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000011535 - Anopheles gambiae
str. PEST
Length = 306
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +3
Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191
+V EL DV+NAFY+GNYQ INE +S + +L++D F+YRSYIAQ YR+V E+K
Sbjct: 10 EVSELIDVENAFYIGNYQTCINECNKISKA----SLEKDIFMYRSYIAQHKYRVVLDEIK 65
Query: 192 TA-DPMLQPLKSLVDYL 239
+ D L L+ L +Y+
Sbjct: 66 PSNDTPLLALRYLAEYM 82
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +2
Query: 260 AIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLA 439
AIV+ D + + +++IV A IY +E+ YE A+K+L +LE + + CLL
Sbjct: 90 AIVSIFDEKFQGDINELHVVWIIVGAIIYCNEETYETAMKVLVGNFNLECPSLHMHCLLK 149
Query: 440 MNRPDLARKQLKLLQDIEDDGTL 508
M+R DLA++ +Q+ +DD TL
Sbjct: 150 MSRVDLAKQVATTMQEKDDDATL 172
Score = 37.5 bits (83), Expect = 0.34
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +1
Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690
QL+QAWLN+ GG +QDA + +L + +++AEQ L +
Sbjct: 174 QLSQAWLNIQIGGEKLQDAFFIFQDLCD-KFSPTLLLLNGQAVCYIGQQKYDDAEQVLRE 232
Query: 691 AASRAPQHADLLLGL 735
+R P + D L+ L
Sbjct: 233 CLNRDPNNYDTLINL 247
>UniRef50_Q55FU2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 300
Score = 69.7 bits (163), Expect = 7e-11
Identities = 42/99 (42%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Frame = +3
Query: 18 DELFDVKNAFYVGNYQQAINEAQSVSPSTPLVAL--QRDAFLYRSYIAQGNYRIVQQELK 191
D LF+ KN FY+GNYQ INE S +L + D FLYR YIAQGNY +V QE K
Sbjct: 4 DILFESKNYFYLGNYQSTINEINKKSRQIIEKSLKAESDYFLYRCYIAQGNYDLVLQETK 63
Query: 192 T-----ADPMLQPLKSLVDYLLPDANNLPLSLILMLEWL 293
DP + L+ L YL N +LI + +W+
Sbjct: 64 NNRGSGEDPTIAGLQLLASYLSKPDENREGTLITITQWI 102
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/70 (32%), Positives = 41/70 (58%)
Frame = +2
Query: 287 VAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARK 466
++ G N ++ ATIY++E Y+ AL+IL+N + +E + +Q L ++R DLA+K
Sbjct: 102 ISDGVVKFNYHLQVIIATIYFNEQLYDEALQILNNCDHIEGLSMLIQIFLKIDRLDLAQK 161
Query: 467 QLKLLQDIED 496
++ I D
Sbjct: 162 AYDTMKKIID 171
>UniRef50_Q9Y0Y5 Cluster: CG9543-PA; n=3; Sophophora|Rep: CG9543-PA
- Drosophila melanogaster (Fruit fly)
Length = 306
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = +2
Query: 296 GTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLK 475
G E I+ + A +Y H+ +E ALKILH + +LE A ++QCLL + R DLA++ +
Sbjct: 102 GEEDETNIWHLATAIVYCHDGQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVA 161
Query: 476 LLQDIEDDGTL 508
+Q+I DD TL
Sbjct: 162 KMQEISDDATL 172
Score = 39.1 bits (87), Expect = 0.11
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +3
Query: 3 HQQDVDE-LFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQ 179
+++D + LFD +N +Y+GN+ +IN V P + +++Y SY+A + RIV
Sbjct: 6 NEEDTNSVLFDARNEYYIGNFMGSIN---FVLPEQGTAGPELLSYMYLSYLAIDSGRIVA 62
Query: 180 QELKTADPMLQPLKSL 227
++K + PL++L
Sbjct: 63 SDIKEGNS--TPLQAL 76
>UniRef50_O64748 Cluster: Coatomer subunit epsilon-2; n=12;
Magnoliophyta|Rep: Coatomer subunit epsilon-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 293
Score = 64.5 bits (150), Expect = 3e-09
Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Frame = +3
Query: 18 DELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQEL-KT 194
D LF+++N FY+G YQ AIN ++ ++ +P A++RD ++RSYIA G+Y++V E+ ++
Sbjct: 9 DHLFNLRNNFYLGAYQTAINNSE-IANLSPENAVERDCLVFRSYIALGSYQLVISEIDES 67
Query: 195 ADPMLQPLKSLVDYLLPDANNLPLSLILMLEWL 293
A LQ +K L Y L N ++ + EWL
Sbjct: 68 AATPLQAVKLLAMY-LSTPQNKESTISSLKEWL 99
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/99 (28%), Positives = 55/99 (55%)
Frame = +2
Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391
A++ L+T + ++ + +A T +N+ ++A I+ HE++Y LK H
Sbjct: 74 AVKLLAMYLSTPQNKESTISSLKEWLADSTIGNNDTLRLIAGIIFMHEEDYNETLKHTHA 133
Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508
+++L A +Q + M+R + A KQL+++Q I++D TL
Sbjct: 134 GGTMDLYALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTL 172
>UniRef50_Q5DEQ9 Cluster: SJCHGC01641 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01641 protein - Schistosoma
japonicum (Blood fluke)
Length = 296
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/76 (36%), Positives = 46/76 (60%)
Frame = +2
Query: 272 DIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRP 451
+++ + +E S + +I+A TIY + D EAA ++LH + A T+QCLL MNR
Sbjct: 90 ELELMFKQSSEFSQDA-VIIAVTIYLNMDMDEAAWRLLHGSNDTYCNALTVQCLLHMNRC 148
Query: 452 DLARKQLKLLQDIEDD 499
DLA K ++ +Q ++D
Sbjct: 149 DLAGKIVRRMQTADED 164
Score = 37.1 bits (82), Expect = 0.46
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 24 LFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQEL--KTA 197
L D +AF +G++Q A+ Q + + ++ LY+ YIAQ Y +V E+ T
Sbjct: 7 LLDAHSAFILGHHQLALKTLQKLKLDSSDTKIR--VLLYKLYIAQKKYGVVLDEIPEDTI 64
Query: 198 DPMLQPLKSLVDYL 239
P + L+ LV YL
Sbjct: 65 IPEFRLLRLLVKYL 78
>UniRef50_O62246 Cluster: Probable coatomer subunit epsilon; n=2;
Caenorhabditis|Rep: Probable coatomer subunit epsilon -
Caenorhabditis elegans
Length = 292
Score = 54.0 bits (124), Expect = 4e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +3
Query: 18 DELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTA 197
D+LF ++N F++G+YQ I EA S ++D +LYRSYIAQG I +E+ A
Sbjct: 3 DKLFSIRNYFFLGSYQSCIGEALKFSSKNEEEKQEKDVYLYRSYIAQGQAFIPLKEIPAA 62
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/82 (32%), Positives = 45/82 (54%)
Frame = +2
Query: 263 IVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAM 442
I+A++ VA + +EI ++AATI D + A + + E LE RA + L+ M
Sbjct: 87 ILAEVQEEVAS-RNIKSEIAAVLAATILNEADLSQDAFRAVSRFEGLEARASKVFILIKM 145
Query: 443 NRPDLARKQLKLLQDIEDDGTL 508
N+ LA ++K + I++D TL
Sbjct: 146 NKRKLAIGEVKKMNQIDEDATL 167
>UniRef50_Q01CY6 Cluster: Coatomer epsilon subunit; n=2;
Ostreococcus|Rep: Coatomer epsilon subunit -
Ostreococcus tauri
Length = 302
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +2
Query: 335 ATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508
AT+ E Y AL++ H + LE+ A + L AM+RP+LA K + +Q ++DD T+
Sbjct: 123 ATVLAREGRYAEALRLCHGSSDLEVMAVAVSVLCAMDRPELAEKHARAMQQVDDDSTV 180
Score = 41.9 bits (94), Expect = 0.016
Identities = 25/77 (32%), Positives = 36/77 (46%)
Frame = +1
Query: 508 AQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLT 687
AQLA AW +L GG IQDA Y EL + +++AE+ LT
Sbjct: 181 AQLASAWASLASGGKKIQDASYIYQELGD-KYAWTPKLYNASAVCSMMMGSYDDAERDLT 239
Query: 688 DAASRAPQHADLLLGLA 738
+A + P++ + L LA
Sbjct: 240 EAVAMDPKNPETLANLA 256
>UniRef50_Q6QP55 Cluster: Epsilon-COP; n=1; Zea mays|Rep:
Epsilon-COP - Zea mays (Maize)
Length = 135
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +3
Query: 18 DELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK-- 191
D LF+++N FY+G YQ AIN + A +RDA ++RSYIA G+Y++
Sbjct: 5 DLLFNLRNLFYLGAYQAAINNIDILGLDA-AAAAERDAIVFRSYIALGSYQVRTHLASGA 63
Query: 192 TADPMLQPLKSLVDYLLPD 248
+A LQ +K L YL D
Sbjct: 64 SAATSLQAVKLLALYLTGD 82
>UniRef50_A5B6P3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 173
Score = 50.4 bits (115), Expect = 5e-05
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +3
Query: 18 DELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQEL-KT 194
D LF ++N F++G +Q AIN + + +P +++RD ++RSYIA G+Y++V E+ +
Sbjct: 5 DLLFGLRNNFFLGAFQAAINNSD-IPNLSPEDSIERDCLVHRSYIALGSYQLVINEIDSS 63
Query: 195 ADPMLQPLKSL 227
A LQ +K L
Sbjct: 64 AATPLQAVKLL 74
>UniRef50_A2EB98 Cluster: Coatomer epsilon subunit family protein;
n=1; Trichomonas vaginalis G3|Rep: Coatomer epsilon
subunit family protein - Trichomonas vaginalis G3
Length = 273
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +2
Query: 299 TELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKL 478
T +N + I A +Y DN AL L+ + E A + CLL +NRPDLA+K+L+
Sbjct: 88 TVATNPYYAISKAMLYIMSDNIPDALLTLNGNTNSEAIAERIHCLLLLNRPDLAQKELEN 147
Query: 479 LQD 487
+ +
Sbjct: 148 ISE 150
>UniRef50_UPI000023D00F Cluster: hypothetical protein FG01539.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01539.1 - Gibberella zeae PH-1
Length = 1020
Score = 35.1 bits (77), Expect = 1.8
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = -2
Query: 255 YWHQVVSNLPNSSMAVA*DLQSLVLVALSCSYPGQCRNDIG--MHRVGV 115
YWH+ V +LPN S AV D+QSL + + G+ + +G +R GV
Sbjct: 493 YWHRDVLSLPNGSSAVQGDIQSLEIRPARLTQDGKPSSGLGADYYRAGV 541
>UniRef50_Q4Q5A7 Cluster: Coatomer epsilon subunit, putative; n=3;
Leishmania|Rep: Coatomer epsilon subunit, putative -
Leishmania major
Length = 323
Score = 35.1 bits (77), Expect = 1.8
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Frame = +3
Query: 18 DELFDVKNAFYVGNYQQAI---NEAQSVSPSTPLVA---LQRDAFLYRSYIAQGNYRIVQ 179
D LFDV+NA VGNY QAI + A+++S VA +++ A + I G V
Sbjct: 3 DVLFDVRNALVVGNYHQAIADGSTARALSSRPADVAAFNVEKSAVVALGQIGLGQVDAVI 62
Query: 180 QELKT-ADPMLQPLKSLVDYL 239
+L++ ++P+L +++ + +
Sbjct: 63 SQLRSESNPLLVTIRTWAELI 83
>UniRef50_Q5KID6 Cluster: Expressed protein; n=1; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 306
Score = 34.7 bits (76), Expect = 2.4
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSV--SPSTPLVALQRDAFLYRSYIA 155
+ D L+ VK FY +YQ I+EA +PS +L R ++ RS++A
Sbjct: 2 EADPLYHVKQLFYQASYQACISEASEYPHTPSDDPSSLHRALYIARSHLA 51
>UniRef50_A5DA23 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1205
Score = 33.5 bits (73), Expect = 5.6
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 287 VAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNA 394
V G E + ++ I A + YH+ NYEAA+ I+HN+
Sbjct: 466 VVCGREKTIDMLSIDLAFLNYHKGNYEAAIDIIHNS 501
>UniRef50_A4H504 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 820
Score = 33.1 bits (72), Expect = 7.4
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 705 GAGRCVCQLLFSLFPHTSGSCSPSTEG 625
GAGR + ++ +LFPHT G S S +G
Sbjct: 730 GAGRGISEMYMTLFPHTKGGISSSGDG 756
>UniRef50_Q4KKC5 Cluster: Heamin storage system, HmsH protein; n=2;
Pseudomonas fluorescens|Rep: Heamin storage system, HmsH
protein - Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477)
Length = 828
Score = 32.7 bits (71), Expect = 9.8
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +1
Query: 661 WEEAEQQLTDAASRAPQHADLLLGLALT 744
W+ A Q A R PQ+ADL LGLALT
Sbjct: 116 WDNATQVYRLALQRDPQNADLQLGLALT 143
>UniRef50_A5VFL2 Cluster: Peptidoglycan-binding LysM precursor; n=1;
Sphingomonas wittichii RW1|Rep: Peptidoglycan-binding
LysM precursor - Sphingomonas wittichii RW1
Length = 394
Score = 32.7 bits (71), Expect = 9.8
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +3
Query: 87 SVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLVDYLLPD 248
+V P+ L AL RD ++ G+YR VQ+ K ADP P+ S++ L+PD
Sbjct: 36 TVRPNDTLSALARD------FLVGGDYREVQRLNKVADPYRMPIGSIL--LIPD 81
>UniRef50_A4BRM1 Cluster: Putative uncharacterized protein; n=1;
Nitrococcus mobilis Nb-231|Rep: Putative uncharacterized
protein - Nitrococcus mobilis Nb-231
Length = 291
Score = 32.7 bits (71), Expect = 9.8
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -1
Query: 673 QPLPTYLWQLQPQHRGRPDQVPMNRDVQIAPSRCSVHLGY 554
+P P +L Q PQ GR ++ +NR P+R S+ LGY
Sbjct: 248 RPRPFFLSQYGPQRAGRRLRILLNRIDPSLPARSSLRLGY 287
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,885,240
Number of Sequences: 1657284
Number of extensions: 14008338
Number of successful extensions: 38549
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 36887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38536
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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