Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00280
(745 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein. 90 7e-18
BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein comple... 90 7e-18
BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein comple... 90 7e-18
BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein comple... 90 7e-18
AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of coat... 90 7e-18
AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein pro... 90 7e-18
AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein. 90 7e-18
AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein. 90 7e-18
AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein. 89 1e-17
AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein. 89 1e-17
BC042683-1|AAH42683.1| 502|Homo sapiens TTC13 protein protein. 31 5.8
AL844165-2|CAI15331.1| 806|Homo sapiens tetratricopeptide repea... 31 5.8
AL844165-1|CAI15330.1| 860|Homo sapiens tetratricopeptide repea... 31 5.8
AL591292-2|CAI17216.1| 806|Homo sapiens tetratricopeptide repea... 31 5.8
AL591292-1|CAI17217.1| 860|Homo sapiens tetratricopeptide repea... 31 5.8
AK075561-1|BAC11700.1| 806|Homo sapiens protein ( Homo sapiens ... 31 5.8
AK075386-1|BAC11586.1| 860|Homo sapiens protein ( Homo sapiens ... 31 5.8
AK026237-1|BAB15407.1| 308|Homo sapiens protein ( Homo sapiens ... 31 5.8
>CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein.
Length = 308
Score = 90.2 bits (214), Expect = 7e-18
Identities = 42/99 (42%), Positives = 68/99 (68%)
Frame = +2
Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391
A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181
Score = 89.4 bits (212), Expect = 1e-17
Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +3
Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 192 -TADPMLQPLKSLVDYL 239
++ P LQ ++ DYL
Sbjct: 75 PSSAPELQAVRMFADYL 91
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +1
Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690
QLA AW++L GG +QDA+Y E+++ WE AE L +
Sbjct: 183 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 241
Query: 691 AASRAPQHADLLLGL 735
A + + + L+ L
Sbjct: 242 ALDKDSGYPETLVNL 256
>BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 90.2 bits (214), Expect = 7e-18
Identities = 42/99 (42%), Positives = 68/99 (68%)
Frame = +2
Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391
A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181
Score = 89.4 bits (212), Expect = 1e-17
Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +3
Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 192 -TADPMLQPLKSLVDYL 239
++ P LQ ++ DYL
Sbjct: 75 PSSAPELQAVRMFADYL 91
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +1
Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690
QLA AW++L GG +QDA+Y E+++ WE AE L +
Sbjct: 183 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 241
Query: 691 AASRAPQHADLLLGL 735
A + + + L+ L
Sbjct: 242 ALDKDSGYPETLVNL 256
>BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 90.2 bits (214), Expect = 7e-18
Identities = 42/99 (42%), Positives = 68/99 (68%)
Frame = +2
Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391
A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181
Score = 89.4 bits (212), Expect = 1e-17
Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +3
Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 192 -TADPMLQPLKSLVDYL 239
++ P LQ ++ DYL
Sbjct: 75 PSSAPELQAVRMFADYL 91
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +1
Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690
QLA AW++L GG +QDA+Y E+++ WE AE L +
Sbjct: 183 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 241
Query: 691 AASRAPQHADLLLGL 735
A + + + L+ L
Sbjct: 242 ALDKDSGYPETLVNL 256
>BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 90.2 bits (214), Expect = 7e-18
Identities = 42/99 (42%), Positives = 68/99 (68%)
Frame = +2
Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391
A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181
Score = 89.4 bits (212), Expect = 1e-17
Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +3
Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 192 -TADPMLQPLKSLVDYL 239
++ P LQ ++ DYL
Sbjct: 75 PSSAPELQAVRMFADYL 91
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +1
Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690
QLA AW++L GG +QDA+Y E+++ WE AE L +
Sbjct: 183 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 241
Query: 691 AASRAPQHADLLLGL 735
A + + + L+ L
Sbjct: 242 ALDKDSGYPETLVNL 256
>AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of
coatomer protein complex isoform a variant protein.
Length = 308
Score = 90.2 bits (214), Expect = 7e-18
Identities = 42/99 (42%), Positives = 68/99 (68%)
Frame = +2
Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391
A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181
Score = 89.4 bits (212), Expect = 1e-17
Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +3
Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 192 -TADPMLQPLKSLVDYL 239
++ P LQ ++ DYL
Sbjct: 75 PSSAPELQAVRMFADYL 91
Score = 34.7 bits (76), Expect = 0.35
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +1
Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690
QLA AW++L GG +QDA+Y E+++ WE AE L +
Sbjct: 183 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 241
Query: 691 AASRAPQHADLLLGL 735
A + + + L+ L
Sbjct: 242 ALDKDSCYPETLVNL 256
>AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein
protein.
Length = 308
Score = 90.2 bits (214), Expect = 7e-18
Identities = 42/99 (42%), Positives = 68/99 (68%)
Frame = +2
Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391
A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181
Score = 89.4 bits (212), Expect = 1e-17
Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +3
Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 192 -TADPMLQPLKSLVDYL 239
++ P LQ ++ DYL
Sbjct: 75 PSSAPELQAVRMFADYL 91
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +1
Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690
QLA AW++L GG +QDA+Y E+++ WE AE L +
Sbjct: 183 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 241
Query: 691 AASRAPQHADLLLGL 735
A + + + L+ L
Sbjct: 242 ALDKDSGYPETLVNL 256
>AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein.
Length = 307
Score = 90.2 bits (214), Expect = 7e-18
Identities = 42/99 (42%), Positives = 68/99 (68%)
Frame = +2
Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391
A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 82 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 141
Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 142 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 180
Score = 87.8 bits (208), Expect = 4e-17
Identities = 41/77 (53%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +3
Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191
+VDELFDVKNAFY+G+YQQ INEA V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 14 EVDELFDVKNAFYIGSYQQCINEAHGVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 73
Query: 192 -TADPMLQPLKSLVDYL 239
++ P LQ ++ DYL
Sbjct: 74 PSSAPELQAVRMFADYL 90
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +1
Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690
QLA AW++L GG +QDA+Y E+++ WE AE L +
Sbjct: 182 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHIAQGRWEAAEGLLQE 240
Query: 691 AASRAPQHADLLLGL 735
A + + + L+ L
Sbjct: 241 ALDKDSGYPETLVNL 255
>AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein.
Length = 245
Score = 90.2 bits (214), Expect = 7e-18
Identities = 42/99 (42%), Positives = 68/99 (68%)
Frame = +2
Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391
A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 20 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 79
Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 80 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 118
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +1
Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690
QLA AW++L GG +QDA+Y E+++ WE AE L +
Sbjct: 120 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 178
Query: 691 AASRAPQHADLLLGL 735
A + + + L+ L
Sbjct: 179 ALDKDSGYPETLVNL 193
>AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein.
Length = 308
Score = 89.4 bits (212), Expect = 1e-17
Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +3
Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 192 -TADPMLQPLKSLVDYL 239
++ P LQ ++ DYL
Sbjct: 75 PSSAPELQAVRMFADYL 91
Score = 89.4 bits (212), Expect = 1e-17
Identities = 42/99 (42%), Positives = 68/99 (68%)
Frame = +2
Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391
A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNITFLLMAASIYLHDQNPDAALRALHQ 142
Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +1
Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690
QLA AW++L GG +QDA+Y E+++ WE AE L +
Sbjct: 183 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 241
Query: 691 AASRAPQHADLLLGL 735
A + + + L+ L
Sbjct: 242 ALDKDSGYPETLVNL 256
>AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein.
Length = 147
Score = 89.4 bits (212), Expect = 1e-17
Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +3
Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191
+VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 192 -TADPMLQPLKSLVDYL 239
++ P LQ ++ DYL
Sbjct: 75 PSSAPELQAVRMFADYL 91
Score = 53.6 bits (123), Expect = 7e-07
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +2
Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391
A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 392 AESLE 406
+SLE
Sbjct: 143 GDSLE 147
>BC042683-1|AAH42683.1| 502|Homo sapiens TTC13 protein protein.
Length = 502
Score = 30.7 bits (66), Expect = 5.8
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +3
Query: 51 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 230
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 341 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 398
Query: 231 DYLLPDANNLPLS 269
Y N +PLS
Sbjct: 399 YYFY---NLMPLS 408
>AL844165-2|CAI15331.1| 806|Homo sapiens tetratricopeptide repeat
domain 13 protein.
Length = 806
Score = 30.7 bits (66), Expect = 5.8
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +3
Query: 51 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 230
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 645 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 702
Query: 231 DYLLPDANNLPLS 269
Y N +PLS
Sbjct: 703 YYFY---NLMPLS 712
>AL844165-1|CAI15330.1| 860|Homo sapiens tetratricopeptide repeat
domain 13 protein.
Length = 860
Score = 30.7 bits (66), Expect = 5.8
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +3
Query: 51 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 230
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 699 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 756
Query: 231 DYLLPDANNLPLS 269
Y N +PLS
Sbjct: 757 YYFY---NLMPLS 766
>AL591292-2|CAI17216.1| 806|Homo sapiens tetratricopeptide repeat
domain 13 protein.
Length = 806
Score = 30.7 bits (66), Expect = 5.8
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +3
Query: 51 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 230
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 645 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 702
Query: 231 DYLLPDANNLPLS 269
Y N +PLS
Sbjct: 703 YYFY---NLMPLS 712
>AL591292-1|CAI17217.1| 860|Homo sapiens tetratricopeptide repeat
domain 13 protein.
Length = 860
Score = 30.7 bits (66), Expect = 5.8
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +3
Query: 51 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 230
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 699 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 756
Query: 231 DYLLPDANNLPLS 269
Y N +PLS
Sbjct: 757 YYFY---NLMPLS 766
>AK075561-1|BAC11700.1| 806|Homo sapiens protein ( Homo sapiens
cDNA PSEC0261 fis, clone NT2RP3004063, weakly similar to
MITOCHONDRIAL PRECURSOR PROTEINS IMPORT RECEPTOR. ).
Length = 806
Score = 30.7 bits (66), Expect = 5.8
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +3
Query: 51 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 230
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 645 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 702
Query: 231 DYLLPDANNLPLS 269
Y N +PLS
Sbjct: 703 YYFY---NLMPLS 712
>AK075386-1|BAC11586.1| 860|Homo sapiens protein ( Homo sapiens
cDNA PSEC0076 fis, clone NT2RP2003471, weakly similar to
MITOCHONDRIAL PRECURSOR PROTEINS IMPORT RECEPTOR3. ).
Length = 860
Score = 30.7 bits (66), Expect = 5.8
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +3
Query: 51 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 230
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 699 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 756
Query: 231 DYLLPDANNLPLS 269
Y N +PLS
Sbjct: 757 YYFY---NLMPLS 766
>AK026237-1|BAB15407.1| 308|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22584 fis, clone HSI02661. ).
Length = 308
Score = 30.7 bits (66), Expect = 5.8
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +3
Query: 51 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 230
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 147 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 204
Query: 231 DYLLPDANNLPLS 269
Y N +PLS
Sbjct: 205 YYFY---NLMPLS 214
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,693,060
Number of Sequences: 237096
Number of extensions: 2287751
Number of successful extensions: 9485
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9485
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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