Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00278
(649 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U77665-1|AAC51143.1| 268|Homo sapiens RNaseP protein P30 protein. 75 3e-13
BC006991-1|AAH06991.1| 268|Homo sapiens ribonuclease P/MRP 30kD... 75 3e-13
AL590622-2|CAC70100.1| 268|Homo sapiens ribonuclease P (30kD) (... 75 3e-13
AL590622-1|CAH72456.1| 254|Homo sapiens ribonuclease P (30kD) (... 75 3e-13
AL590622-3|CAH72457.1| 212|Homo sapiens ribonuclease P (30kD) (... 52 1e-06
AB037715-1|BAA92532.1| 1051|Homo sapiens KIAA1294 protein protein. 30 8.2
>U77665-1|AAC51143.1| 268|Homo sapiens RNaseP protein P30 protein.
Length = 268
Score = 74.5 bits (175), Expect = 3e-13
Identities = 36/86 (41%), Positives = 54/86 (62%)
Frame = +2
Query: 263 RIPFKVHRKLYKQAVDRGIFFEIMYSPIIRDSTARKNIISNAHVYHTVGKSKNIILTSGA 442
++PF R A+DRG+ FE++YSP I+DST R+ IS+A + K KN+I++S A
Sbjct: 132 KLPFYFKRPPINVAIDRGLAFELVYSPAIKDSTMRRYTISSALNLMQICKGKNVIISSAA 191
Query: 443 DNHMHIRSVNDIINLGFLLGLNTTRA 520
+ + IR D+ NLG L GL+ + A
Sbjct: 192 ERPLEIRGPYDVANLGLLFGLSESDA 217
Score = 49.2 bits (112), Expect = 1e-05
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 84 LNILQRITIEFSDSGIVHKLNR-SENIKKYDIIAVIPKTLQAFQYACSSMDIDIISFELK 260
+ IL R+TI SD + L S + YD++AV PKT + F AC+ +D+D++ +
Sbjct: 71 IKILTRLTIIVSDPSHCNVLRATSSRARLYDVVAVFPKTEKLFHIACTHLDVDLVCITVT 130
Query: 261 EEYPLKY 281
E+ P +
Sbjct: 131 EKLPFYF 137
>BC006991-1|AAH06991.1| 268|Homo sapiens ribonuclease P/MRP 30kDa
subunit protein.
Length = 268
Score = 74.5 bits (175), Expect = 3e-13
Identities = 36/86 (41%), Positives = 54/86 (62%)
Frame = +2
Query: 263 RIPFKVHRKLYKQAVDRGIFFEIMYSPIIRDSTARKNIISNAHVYHTVGKSKNIILTSGA 442
++PF R A+DRG+ FE++YSP I+DST R+ IS+A + K KN+I++S A
Sbjct: 132 KLPFYFKRPPINVAIDRGLAFELVYSPAIKDSTMRRYTISSALNLMQICKGKNVIISSAA 191
Query: 443 DNHMHIRSVNDIINLGFLLGLNTTRA 520
+ + IR D+ NLG L GL+ + A
Sbjct: 192 ERPLEIRGPYDVANLGLLFGLSESDA 217
Score = 49.2 bits (112), Expect = 1e-05
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 84 LNILQRITIEFSDSGIVHKLNR-SENIKKYDIIAVIPKTLQAFQYACSSMDIDIISFELK 260
+ IL R+TI SD + L S + YD++AV PKT + F AC+ +D+D++ +
Sbjct: 71 IKILTRLTIIVSDPSHCNVLRATSSRARLYDVVAVFPKTEKLFHIACTHLDVDLVCITVT 130
Query: 261 EEYPLKY 281
E+ P +
Sbjct: 131 EKLPFYF 137
>AL590622-2|CAC70100.1| 268|Homo sapiens ribonuclease P (30kD)
(RPP30) protein.
Length = 268
Score = 74.5 bits (175), Expect = 3e-13
Identities = 36/86 (41%), Positives = 54/86 (62%)
Frame = +2
Query: 263 RIPFKVHRKLYKQAVDRGIFFEIMYSPIIRDSTARKNIISNAHVYHTVGKSKNIILTSGA 442
++PF R A+DRG+ FE++YSP I+DST R+ IS+A + K KN+I++S A
Sbjct: 132 KLPFYFKRPPINVAIDRGLAFELVYSPAIKDSTMRRYTISSALNLMQICKGKNVIISSAA 191
Query: 443 DNHMHIRSVNDIINLGFLLGLNTTRA 520
+ + IR D+ NLG L GL+ + A
Sbjct: 192 ERPLEIRGPYDVANLGLLFGLSESDA 217
Score = 49.2 bits (112), Expect = 1e-05
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 84 LNILQRITIEFSDSGIVHKLNR-SENIKKYDIIAVIPKTLQAFQYACSSMDIDIISFELK 260
+ IL R+TI SD + L S + YD++AV PKT + F AC+ +D+D++ +
Sbjct: 71 IKILTRLTIIVSDPSHCNVLRATSSRARLYDVVAVFPKTEKLFHIACTHLDVDLVCITVT 130
Query: 261 EEYPLKY 281
E+ P +
Sbjct: 131 EKLPFYF 137
>AL590622-1|CAH72456.1| 254|Homo sapiens ribonuclease P (30kD)
(RPP30) protein.
Length = 254
Score = 74.5 bits (175), Expect = 3e-13
Identities = 36/86 (41%), Positives = 54/86 (62%)
Frame = +2
Query: 263 RIPFKVHRKLYKQAVDRGIFFEIMYSPIIRDSTARKNIISNAHVYHTVGKSKNIILTSGA 442
++PF R A+DRG+ FE++YSP I+DST R+ IS+A + K KN+I++S A
Sbjct: 154 KLPFYFKRPPINVAIDRGLAFELVYSPAIKDSTMRRYTISSALNLMQICKGKNVIISSAA 213
Query: 443 DNHMHIRSVNDIINLGFLLGLNTTRA 520
+ + IR D+ NLG L GL+ + A
Sbjct: 214 ERPLEIRGPYDVANLGLLFGLSESDA 239
Score = 49.2 bits (112), Expect = 1e-05
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 84 LNILQRITIEFSDSGIVHKLNR-SENIKKYDIIAVIPKTLQAFQYACSSMDIDIISFELK 260
+ IL R+TI SD + L S + YD++AV PKT + F AC+ +D+D++ +
Sbjct: 93 IKILTRLTIIVSDPSHCNVLRATSSRARLYDVVAVFPKTEKLFHIACTHLDVDLVCITVT 152
Query: 261 EEYPLKY 281
E+ P +
Sbjct: 153 EKLPFYF 159
>AL590622-3|CAH72457.1| 212|Homo sapiens ribonuclease P (30kD)
(RPP30) protein.
Length = 212
Score = 52.4 bits (120), Expect = 1e-06
Identities = 32/86 (37%), Positives = 46/86 (53%)
Frame = +2
Query: 263 RIPFKVHRKLYKQAVDRGIFFEIMYSPIIRDSTARKNIISNAHVYHTVGKSKNIILTSGA 442
++PF R A+DRG+ FE++YSP I+DST R+ IS+A + K K
Sbjct: 86 KLPFYFKRPPINVAIDRGLAFELVYSPAIKDSTMRRYTISSALNLMQICKGK-------- 137
Query: 443 DNHMHIRSVNDIINLGFLLGLNTTRA 520
+ IR D+ NLG L GL+ + A
Sbjct: 138 --PLEIRGPYDVANLGLLFGLSESDA 161
Score = 49.2 bits (112), Expect = 1e-05
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 84 LNILQRITIEFSDSGIVHKLNR-SENIKKYDIIAVIPKTLQAFQYACSSMDIDIISFELK 260
+ IL R+TI SD + L S + YD++AV PKT + F AC+ +D+D++ +
Sbjct: 25 IKILTRLTIIVSDPSHCNVLRATSSRARLYDVVAVFPKTEKLFHIACTHLDVDLVCITVT 84
Query: 261 EEYPLKY 281
E+ P +
Sbjct: 85 EKLPFYF 91
>AB037715-1|BAA92532.1| 1051|Homo sapiens KIAA1294 protein protein.
Length = 1051
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 490 ISAWPQYNESLEVVRNNTRRLILKTEGRKCGKHYMSFSPIE 612
I AW ++++V ++ L++ TEGR+C H + +E
Sbjct: 5 IRAWESETMAVQLVPDSALGLLMMTEGRRCQVHLLDDRKLE 45
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,866,028
Number of Sequences: 237096
Number of extensions: 1696977
Number of successful extensions: 6437
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6437
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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