Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00276
(751 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 56 7e-08
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 54 2e-07
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 54 2e-07
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 54 2e-07
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 54 2e-07
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 53 4e-07
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 51 1e-06
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 51 1e-06
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 51 1e-06
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 51 1e-06
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 51 1e-06
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 51 1e-06
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 51 1e-06
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 50 3e-06
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 50 3e-06
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 50 3e-06
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 46 6e-05
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 44 3e-04
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 42 7e-04
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 42 0.001
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 39 0.006
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 37 0.034
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 33 0.31
AY047571-1|AAK77303.1| 592|Drosophila melanogaster GH08349p pro... 30 2.9
AE014296-201|AAF47460.1| 592|Drosophila melanogaster CG9128-PA ... 30 2.9
AE014134-1117|AAF52406.1| 315|Drosophila melanogaster CG13766-P... 30 3.9
BT024326-1|ABC86388.1| 304|Drosophila melanogaster IP10767p pro... 29 5.1
X55542-1|CAA39148.1| 530|Drosophila melanogaster cyclin B protein. 29 8.9
M33192-1|AAA28436.1| 530|Drosophila melanogaster protein ( D.me... 29 8.9
AY102682-1|AAM27511.1| 530|Drosophila melanogaster LD23613p pro... 29 8.9
AJ006773-3|CAA07240.1| 500|Drosophila melanogaster cyclin B, ty... 29 8.9
AJ006773-2|CAA07239.1| 524|Drosophila melanogaster cyclin B, ty... 29 8.9
AJ006773-1|CAA07238.1| 530|Drosophila melanogaster cyclin B, ty... 29 8.9
AE013599-3472|AAM71124.1| 500|Drosophila melanogaster CG3510-PC... 29 8.9
AE013599-3471|AAG22197.1| 524|Drosophila melanogaster CG3510-PB... 29 8.9
AE013599-3470|AAM71123.1| 530|Drosophila melanogaster CG3510-PD... 29 8.9
AE013599-3469|AAF46904.1| 530|Drosophila melanogaster CG3510-PA... 29 8.9
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 55.6 bits (128), Expect = 7e-08
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKHSCKEVHCLTEHI*I 308
YRPISLL L + + P L + K I R H + +
Sbjct: 561 YRPISLLSGLSKLLERILPKR-LYDIDSFAKA--IPSHQFGFRKDHGAEHQLARVTQFIL 617
Query: 309 ELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVE 488
+ K + + T F DI +AFD+VWH+GL+YKL + + L ++ ++LSNR+F R++
Sbjct: 618 KAFDEKDVCSAT-FLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRID 675
Query: 489 G-TRSR 503
G T SR
Sbjct: 676 GETTSR 681
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 54.4 bits (125), Expect = 2e-07
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKHSCKEVHCLTEHI*I 308
YRPISLL L + ++ + L + K I R H + +
Sbjct: 114 YRPISLLSGLSKL-LERILLKRLYDIDSFAKA--IPSHQFGFRKDHGAEHQLARVTQFIL 170
Query: 309 ELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVE 488
+ K + + T F DI +AFD+VWH+GL+YKL + + L ++ ++LSNR+F R++
Sbjct: 171 KAFDEKDVCSAT-FLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRID 228
Query: 489 G-TRSR 503
G T SR
Sbjct: 229 GETTSR 234
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 54.4 bits (125), Expect = 2e-07
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKHSCKEVHCLTEHI*I 308
YRPISLL L + ++ + L + K I R H + +
Sbjct: 561 YRPISLLSGLSKL-LERILLKRLYDIDSFAKA--IPSHQFGFRKDHGAEHQLARVTQFIL 617
Query: 309 ELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVE 488
+ K + + T F DI +AFD+VWH+GL+YKL + + L ++ ++LSNR+F R++
Sbjct: 618 KAFDEKDVCSAT-FLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRID 675
Query: 489 G-TRSR 503
G T SR
Sbjct: 676 GETTSR 681
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 54.4 bits (125), Expect = 2e-07
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKHSCKEVHCLTEHI*I 308
YRPISLL L + ++ + L + K I R H + +
Sbjct: 561 YRPISLLSGLSKL-LERILLKRLYDIDSFAKA--IPSHQFGFRKDHGAEHQLARVTQFIL 617
Query: 309 ELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVE 488
+ K + + T F DI +AFD+VWH+GL+YKL + + L ++ ++LSNR+F R++
Sbjct: 618 KAFDEKDVCSAT-FLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRID 675
Query: 489 G-TRSR 503
G T SR
Sbjct: 676 GETTSR 681
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 54.0 bits (124), Expect = 2e-07
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
Frame = +3
Query: 129 YRPISLLLSLDR--QNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKHSCKEVHCLTEHI 302
YRPISLL SL + + + ++ + D R + + ++VH LT+HI
Sbjct: 514 YRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFR----QGHSTVEQVHRLTKHI 569
Query: 303 *IELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYR 482
+ ++ +F D+ +AFD+VWH+GLI K+ + + +++ +L +R F R
Sbjct: 570 LQAFDDKEYC--NAVFIDMQQAFDRVWHDGLISKVKKLFPAP-YYGVLKSYLEDRRFMVR 626
Query: 483 VEGTRSRPRI*R 518
V + S PR+ R
Sbjct: 627 VRNSYSIPRVMR 638
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 53.2 bits (122), Expect = 4e-07
Identities = 42/124 (33%), Positives = 60/124 (48%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKHSCKEVHCLTEHI*I 308
YRPISLL SL + ++ LL V K I + R +H E + +
Sbjct: 317 YRPISLLPSLGKI-MERLILNRLLTCKDVTKA--IPKFQFGFRLQHGTPEQLHRVVNFAL 373
Query: 309 ELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVE 488
E + K G F DI +AFD+VWH GL+YK + L L+++ FL R+F V+
Sbjct: 374 EAMENKEYAVGA-FLDIQQAFDRVWHPGLLYKAKRLFPPQ-LYLVVKSFLEERTFHVSVD 431
Query: 489 GTRS 500
G +S
Sbjct: 432 GYKS 435
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 51.2 bits (117), Expect = 1e-06
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKHSCKEVHCLTEHI*I 308
YRPISLL L + + + L + L +K + Q R +H ++ +
Sbjct: 442 YRPISLLSGLSKM-FERLLLKRLFRVDLFKKAIPLHQFGF--RKEHGTEQQIARVTQFIL 498
Query: 309 ELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVE 488
E +RK +F DI++AFD+VWH GL+ KL + + L +I+ +L+NR+F + +
Sbjct: 499 EAFERKEY-CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQ 556
Query: 489 -GTRSR 503
G SR
Sbjct: 557 AGETSR 562
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 51.2 bits (117), Expect = 1e-06
Identities = 41/124 (33%), Positives = 59/124 (47%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKHSCKEVHCLTEHI*I 308
YRP SLL SL + ++ LL V K I + R +H E + +
Sbjct: 515 YRPTSLLPSLGKI-MERLILNRLLTCKDVTKA--IPKFQFGFRLQHGTPEQLHRVVNFAL 571
Query: 309 ELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVE 488
E + K G F DI +AFD+VWH GL+YK + L L+++ FL R+F V+
Sbjct: 572 EAMENKEYAVGA-FLDIQQAFDRVWHPGLLYKAKRLFPPQ-LYLVVKSFLEERTFHVSVD 629
Query: 489 GTRS 500
G +S
Sbjct: 630 GYKS 633
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 51.2 bits (117), Expect = 1e-06
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKHSCKEVHCLTEHI*I 308
YRPISLL L + + + L + L +K + Q R +H ++ +
Sbjct: 570 YRPISLLSGLSKM-FERLLLKRLFRVDLFKKAIPLHQFGF--RKEHGTEQQIARVTQFIL 626
Query: 309 ELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVE 488
E +RK +F DI++AFD+VWH GL+ KL + + L +I+ +L+NR+F + +
Sbjct: 627 EAFERKEY-CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQ 684
Query: 489 -GTRSR 503
G SR
Sbjct: 685 AGETSR 690
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 51.2 bits (117), Expect = 1e-06
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKHSCKEVHCLTEHI*I 308
YRPISLL L + + + L + L +K + Q R +H ++ +
Sbjct: 558 YRPISLLSGLSKM-FERLLLKRLFRVDLFKKAIPLHQFGF--RKEHGTEQQIARVTQFIL 614
Query: 309 ELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVE 488
E +RK +F DI++AFD+VWH GL+ KL + + L +I+ +L+NR+F + +
Sbjct: 615 EAFERKEY-CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQ 672
Query: 489 -GTRSR 503
G SR
Sbjct: 673 AGETSR 678
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 51.2 bits (117), Expect = 1e-06
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKHSCKEVHCLTEHI*I 308
YRPISLL L + + + L + L +K + Q R +H ++ +
Sbjct: 558 YRPISLLSGLSKM-FERLLLKRLFRVDLFKKAIPLHQFGF--RKEHGTEQQIARVTQFIL 614
Query: 309 ELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVE 488
E +RK +F DI++AFD+VWH GL+ KL + + L +I+ +L+NR+F + +
Sbjct: 615 EAFERKEY-CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQ 672
Query: 489 -GTRSR 503
G SR
Sbjct: 673 AGETSR 678
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 51.2 bits (117), Expect = 1e-06
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKHSCKEVHCLTEHI*I 308
YRPISLL L + + + L + L +K + Q R +H ++ +
Sbjct: 520 YRPISLLSGLSKM-FERLLLKRLFRVDLFKKAIPLHQFGF--RKEHGTEQQIARVTQFIL 576
Query: 309 ELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVE 488
E +RK +F DI++AFD+VWH GL+ KL + + L +I+ +L+NR+F + +
Sbjct: 577 EAFERKEY-CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQ 634
Query: 489 -GTRSR 503
G SR
Sbjct: 635 AGETSR 640
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 51.2 bits (117), Expect = 1e-06
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKHSCKEVHCLTEHI*I 308
YRPISLL L + + + L + L +K + Q R +H ++ +
Sbjct: 558 YRPISLLSGLSKM-FERLLLKRLFRVDLFKKAIPLHQFGF--RKEHGTEQQIARVTQFIL 614
Query: 309 ELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVE 488
E +RK +F DI++AFD+VWH GL+ KL + + L +I+ +L+NR+F + +
Sbjct: 615 EAFERKEY-CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQ 672
Query: 489 -GTRSR 503
G SR
Sbjct: 673 AGETSR 678
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 50.4 bits (115), Expect = 3e-06
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +3
Query: 339 GTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVEGTRSRPRI 512
G + DI AFD VWH+GL++KL +G L+ I+++FL++R F + ++S RI
Sbjct: 604 GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRI 661
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 50.4 bits (115), Expect = 3e-06
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +3
Query: 339 GTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVEGTRSRPRI 512
G + DI AFD VWH+GL++KL +G L+ I+++FL++R F + ++S RI
Sbjct: 552 GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRI 609
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 50.0 bits (114), Expect = 3e-06
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKHSCKEVHCLTEHI*I 308
YRPISLL L + + + L + L +K + Q R +H ++ +
Sbjct: 558 YRPISLLSGLSKI-FERLLLKRLFKVDLFKKAIPLHQFGF--RKEHGSEQQIARVTQFIL 614
Query: 309 ELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVE 488
E +RK +F DI++AFD+VWH GL+ KL + + L +I+ +L+NR+F + +
Sbjct: 615 EAFERKEY-CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQ 672
Query: 489 -GTRSR 503
G SR
Sbjct: 673 AGETSR 678
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 46.0 bits (104), Expect = 6e-05
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKH-SCKEVHCLTEHI* 305
YRPISLL L + + + HL + ++ + R KH + ++V+ +T I
Sbjct: 509 YRPISLLTCLSK--LFEKMLLLRISPHL-RINNTLPTHQFGFREKHGTIEQVNRITSEIR 565
Query: 306 IELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRV 485
R+ +F D+A+AFD+VW +GL++K+ + + +++ +L NR F R
Sbjct: 566 TAFEHREYCTA--IFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRC 622
Query: 486 EGTRSR 503
+ + SR
Sbjct: 623 DTSTSR 628
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 43.6 bits (98), Expect = 3e-04
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKH-SCKEVHCLTEHI* 305
YRPISLL L + + + HL + ++ + R KH + ++V+ +T I
Sbjct: 509 YRPISLLTCLSK--LFEKMLLLRISPHL-RINNTLPTHQFGFREKHGTIEQVNRITSEIR 565
Query: 306 IELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRV 485
R+ +F D+A+AFD+VW +GL++K+ + + +++ +L N F R
Sbjct: 566 TAFEHREYCTA--IFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRC 622
Query: 486 EGTRSR 503
+ + SR
Sbjct: 623 DTSTSR 628
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 42.3 bits (95), Expect = 7e-04
Identities = 33/128 (25%), Positives = 58/128 (45%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKHSCKEVHCLTEHI*I 308
YRPISLL L + ++ ++ L +++ + I V ++ HS + +H
Sbjct: 513 YRPISLLSCLGK-TLEKIIAQRLTWF--IKRHNLISHNQVAFKSNHSTMDALLRIQHFAS 569
Query: 309 ELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVE 488
K L D +AFD+V + ++ +L G+ L +I+ F++NRSF R+
Sbjct: 570 NALSTKN-HVSILATDFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRIN 628
Query: 489 GTRSRPRI 512
S I
Sbjct: 629 NVTSNSHI 636
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 41.5 bits (93), Expect = 0.001
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLVQKDDDIDQRAVWVRAKHSC-KEVHCLTEHI* 305
YRPISLL L + + + HL + + + AKH ++V+ +T I
Sbjct: 50 YRPISLLTCLSK--LFEKGLLLRISPHL-KTHNTLPSYQFDFPAKHGAIEQVNRITTEIR 106
Query: 306 IELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRV 485
R+ LF D+A+AFD+VW +GL++K+ + + + +++ +L R F R
Sbjct: 107 TAFEHREYCTA--LFLDVAQAFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRC 163
Query: 486 EGTRS 500
+ S
Sbjct: 164 SSSTS 168
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 39.1 bits (87), Expect = 0.006
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Frame = +3
Query: 129 YRPISLLLSLDRQNIQTTPSETLLGLHLV---QKDDDIDQRAVWVRAKH-SCKEVHCLTE 296
YRPISLL S+ + E L+ + +V + + RA H + +++H + E
Sbjct: 513 YRPISLLPSISKV------FERLIAVRIVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVE 566
Query: 297 HI*IELNKRKLIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFP 476
I + ++ +LF DI +AFD+VWH GL K+ + +++ +L R F
Sbjct: 567 QILTAYDSKEYC--NSLFLDIREAFDRVWHIGLQLKI-KQTLPAPYFGLLKSYLEGRRFA 623
Query: 477 YR 482
R
Sbjct: 624 VR 625
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 36.7 bits (81), Expect = 0.034
Identities = 15/46 (32%), Positives = 31/46 (67%)
Frame = +3
Query: 345 LFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYR 482
+F D+++AFDKVW +GL++K+ + + + +++ +L +R F R
Sbjct: 579 VFLDVSQAFDKVWLDGLMFKI-KISLPESTHKLLKSYLYDRKFAVR 623
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 33.5 bits (73), Expect = 0.31
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 336 TGTLFFDIAKAFDKVWHNGLIYKLYNMGVSD*LVLIIRDFLSNRSFPYRVEGTRSRP 506
T + D ++AFD+V + +I +L ++ I++F+SNR RV S P
Sbjct: 570 TSLVTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSP 626
>AY047571-1|AAK77303.1| 592|Drosophila melanogaster GH08349p
protein.
Length = 592
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = -1
Query: 220 FWTRCSPRSVSEGVVCIFCLSSDKRRLIGRYRKIVIVVLYRNQRTFYFSAIGTTPW 53
FW+ + RSV +FC SD++ + + + +V + Q T + G+ P+
Sbjct: 206 FWSIITRRSVQRAGTRLFCRGSDEQGHVANFVETEQIVEFNGQLTGFVQTRGSMPF 261
>AE014296-201|AAF47460.1| 592|Drosophila melanogaster CG9128-PA
protein.
Length = 592
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = -1
Query: 220 FWTRCSPRSVSEGVVCIFCLSSDKRRLIGRYRKIVIVVLYRNQRTFYFSAIGTTPW 53
FW+ + RSV +FC SD++ + + + +V + Q T + G+ P+
Sbjct: 206 FWSIITRRSVQRAGTRLFCRGSDEQGHVANFVETEQIVEFNGQLTGFVQTRGSMPF 261
>AE014134-1117|AAF52406.1| 315|Drosophila melanogaster CG13766-PA
protein.
Length = 315
Score = 29.9 bits (64), Expect = 3.9
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -2
Query: 315 LALFKYVP*GSALLCTNVWREPKPLVDQYRRLFGRDVVPEAFPKESFVYF 166
+ + + P LLC VWR+P+ YR++ D + + KE ++YF
Sbjct: 22 IKMARLAPRFKELLCLIVWRKPR-----YRKVSVSDSMLKPLSKEDYIYF 66
>BT024326-1|ABC86388.1| 304|Drosophila melanogaster IP10767p
protein.
Length = 304
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -2
Query: 315 LALFKYVP*GSALLCTNVWREPKPLVDQYRRLFGRDVVPEAFPKESFVYF 166
+ + + P LLC VWR+P+ YR++ D + + KE ++YF
Sbjct: 43 IKMARLAPRFKELLCLIVWRKPR-----YRKVSISDSMLKPLSKEDYIYF 87
>X55542-1|CAA39148.1| 530|Drosophila melanogaster cyclin B protein.
Length = 530
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 461 EPFVSISSRGNSLSPPHLTAGGIPAVDSANTALARASVSNVVRLEPRELT 610
+P S + GN PP + GG+ A +N+ R V EP ++T
Sbjct: 85 QPLGSTNGNGNGAVPPKVNEGGVSAFLRSNSVRNRVPTKTTV--EPTKVT 132
>M33192-1|AAA28436.1| 530|Drosophila melanogaster protein (
D.melanogaster cyclinB mRNA, complete cds. ).
Length = 530
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 461 EPFVSISSRGNSLSPPHLTAGGIPAVDSANTALARASVSNVVRLEPRELT 610
+P S + GN PP + GG+ A +N+ R V EP ++T
Sbjct: 85 QPLGSTNGNGNGAVPPKVNEGGVSAFLRSNSVRNRVPTKTTV--EPTKVT 132
>AY102682-1|AAM27511.1| 530|Drosophila melanogaster LD23613p
protein.
Length = 530
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 461 EPFVSISSRGNSLSPPHLTAGGIPAVDSANTALARASVSNVVRLEPRELT 610
+P S + GN PP + GG+ A +N+ R V EP ++T
Sbjct: 85 QPLGSTNGNGNGAVPPKVNEGGVSAFLRSNSVRNRVPTKTTV--EPTKVT 132
>AJ006773-3|CAA07240.1| 500|Drosophila melanogaster cyclin B, type
III protein.
Length = 500
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 461 EPFVSISSRGNSLSPPHLTAGGIPAVDSANTALARASVSNVVRLEPRELT 610
+P S + GN PP + GG+ A +N+ R V EP ++T
Sbjct: 55 QPLGSTNGNGNGAVPPKVNEGGVSAFLRSNSVRNRVPTKTTV--EPTKVT 102
>AJ006773-2|CAA07239.1| 524|Drosophila melanogaster cyclin B, type
II protein.
Length = 524
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 461 EPFVSISSRGNSLSPPHLTAGGIPAVDSANTALARASVSNVVRLEPRELT 610
+P S + GN PP + GG+ A +N+ R V EP ++T
Sbjct: 79 QPLGSTNGNGNGAVPPKVNEGGVSAFLRSNSVRNRVPTKTTV--EPTKVT 126
>AJ006773-1|CAA07238.1| 530|Drosophila melanogaster cyclin B, type
I protein.
Length = 530
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 461 EPFVSISSRGNSLSPPHLTAGGIPAVDSANTALARASVSNVVRLEPRELT 610
+P S + GN PP + GG+ A +N+ R V EP ++T
Sbjct: 85 QPLGSTNGNGNGAVPPKVNEGGVSAFLRSNSVRNRVPTKTTV--EPTKVT 132
>AE013599-3472|AAM71124.1| 500|Drosophila melanogaster CG3510-PC,
isoform C protein.
Length = 500
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 461 EPFVSISSRGNSLSPPHLTAGGIPAVDSANTALARASVSNVVRLEPRELT 610
+P S + GN PP + GG+ A +N+ R V EP ++T
Sbjct: 55 QPLGSTNGNGNGAVPPKVNEGGVSAFLRSNSVRNRVPTKTTV--EPTKVT 102
>AE013599-3471|AAG22197.1| 524|Drosophila melanogaster CG3510-PB,
isoform B protein.
Length = 524
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 461 EPFVSISSRGNSLSPPHLTAGGIPAVDSANTALARASVSNVVRLEPRELT 610
+P S + GN PP + GG+ A +N+ R V EP ++T
Sbjct: 79 QPLGSTNGNGNGAVPPKVNEGGVSAFLRSNSVRNRVPTKTTV--EPTKVT 126
>AE013599-3470|AAM71123.1| 530|Drosophila melanogaster CG3510-PD,
isoform D protein.
Length = 530
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 461 EPFVSISSRGNSLSPPHLTAGGIPAVDSANTALARASVSNVVRLEPRELT 610
+P S + GN PP + GG+ A +N+ R V EP ++T
Sbjct: 85 QPLGSTNGNGNGAVPPKVNEGGVSAFLRSNSVRNRVPTKTTV--EPTKVT 132
>AE013599-3469|AAF46904.1| 530|Drosophila melanogaster CG3510-PA,
isoform A protein.
Length = 530
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 461 EPFVSISSRGNSLSPPHLTAGGIPAVDSANTALARASVSNVVRLEPRELT 610
+P S + GN PP + GG+ A +N+ R V EP ++T
Sbjct: 85 QPLGSTNGNGNGAVPPKVNEGGVSAFLRSNSVRNRVPTKTTV--EPTKVT 132
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,022,602
Number of Sequences: 53049
Number of extensions: 673131
Number of successful extensions: 2508
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 2419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2495
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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