Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00273
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   1.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   1.1  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    24   1.1  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   8.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.1  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
 Frame = +1

Query: 46  YVFIVIFLSIVLRGNSSTTL*RLFFIH--VISDPLDPLMVLLSTPSISHRFSRTVDEELG 219
           Y FI  F      GN   T  + F+IH  +I   L     L +T   S + +R V     
Sbjct: 240 YFFISTFFYFFTTGNIIATYDKQFYIHNALIVRALFLFFQLWATVYTSSQVTREVQSRSN 299

Query: 220 E*INPQTQPTEFS 258
                + QP  FS
Sbjct: 300 RMTPLKLQPQNFS 312


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
 Frame = +1

Query: 46  YVFIVIFLSIVLRGNSSTTL*RLFFIH--VISDPLDPLMVLLSTPSISHRFSRTVDEELG 219
           Y FI  F      GN   T  + F+IH  +I   L     L +T   S + +R V     
Sbjct: 236 YFFISTFFYFFTTGNIIATYDKQFYIHNALIVRALFLFFQLWATVYTSSQVTREVQSRSN 295

Query: 220 E*INPQTQPTEFS 258
                + QP  FS
Sbjct: 296 RMTPLKLQPQNFS 308


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -1

Query: 588 SGLVDTLSVNYVQRLRPSDAG 526
           S ++D+ SV+Y +R+RP+  G
Sbjct: 42  SAILDSFSVSYDKRVRPNYGG 62


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 414 SLPKHHKTIDKNYQMQRNTIKFIK*PF 494
           S+P+H K      ++ R T K    PF
Sbjct: 113 SIPRHEKLTAAEIKLTRETAKNTSHPF 139


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +3

Query: 66  FEYCLTRKFQYYIVKIVLY 122
           F+Y + R F YY+    ++
Sbjct: 144 FQYYIGRSFTYYVCNTTIF 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,852
Number of Sequences: 336
Number of extensions: 3457
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)