Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00272
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    25   0.86 
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    25   0.86 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.86 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.86 
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    25   0.86 
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    24   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 253 GCSPNQVITNVGFFGKGST 197
           GCSP ++I  + F+G+  T
Sbjct: 256 GCSPKKLIVGIPFYGRTFT 274


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +3

Query: 90  LQNYLRIRSVHPNVDYNECINFLKNEAEKIGLQVQVVEPLPKKPTLVMTWLGEQP 254
           L+N L +R  +  V YN+  + +    EK   Q+   E  P    LV  WL   P
Sbjct: 81  LENKLGVRQEN-RVKYNQNYSKVFGNDEKALEQIAKSEKEPSLTDLVQRWLERTP 134


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +3

Query: 90  LQNYLRIRSVHPNVDYNECINFLKNEAEKIGLQVQVVEPLPKKPTLVMTWLGEQP 254
           L+N L +R  +  V YN+  + +    EK   Q+   E  P    LV  WL   P
Sbjct: 141 LENKLGVRQEN-RVKYNQNYSKVFGNDEKALEQIAKSEKEPSLTDLVQRWLERTP 194


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +3

Query: 90  LQNYLRIRSVHPNVDYNECINFLKNEAEKIGLQVQVVEPLPKKPTLVMTWLGEQP 254
           L+N L +R  +  V YN+  + +    EK   Q+   E  P    LV  WL   P
Sbjct: 141 LENKLGVRQEN-RVKYNQNYSKVFGNDEKALEQIAKSEKEPSLTDLVQRWLERTP 194


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +1

Query: 484 DWWRYWNGEFVQTDVFKNMNVGFALDEGVAS 576
           DWW     ++  T ++KN        EG+ S
Sbjct: 97  DWWNELEAKYDPTGIYKNKYADELKAEGIVS 127


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
 Frame = +1

Query: 430 NRC-QAQKDCASVICT----RRGDWWRYWNGEFVQTDVFKNMNVGFALDEGV 570
           ++C Q QKD +  I       + DWW     ++  T ++KN        EG+
Sbjct: 74  SKCSQRQKDGSRTIIRYLIKNKRDWWNELEAKYDPTGIYKNKYADELKAEGI 125


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 657 RFPSAPRQLRRKVAVHNRQVHG 722
           R+PS P    R  A  NR+++G
Sbjct: 36  RYPSGPELSDRSAAYTNRELYG 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,064
Number of Sequences: 336
Number of extensions: 3998
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)