BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00272
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68214-5|CAA92446.2| 397|Caenorhabditis elegans Hypothetical pr... 94 8e-20
Z68214-3|CAA92445.1| 399|Caenorhabditis elegans Hypothetical pr... 94 8e-20
U41012-2|AAV28364.1| 411|Caenorhabditis elegans Hypothetical pr... 93 2e-19
U41012-1|AAA82294.3| 397|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z68214-4|CAA92447.1| 397|Caenorhabditis elegans Hypothetical pr... 89 4e-18
Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical pr... 38 0.006
AC024859-4|AAK29983.4| 472|Caenorhabditis elegans Hypothetical ... 36 0.023
U39647-1|AAA80375.2| 351|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z81513-5|CAB04175.1| 332|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical p... 29 3.5
AF068719-7|AAO21425.1| 399|Caenorhabditis elegans Uncoordinated... 29 3.5
AF068719-6|AAV58864.1| 457|Caenorhabditis elegans Uncoordinated... 29 3.5
AF068719-5|AAC17781.1| 458|Caenorhabditis elegans Uncoordinated... 29 3.5
AC084154-6|AAO91684.1| 319|Caenorhabditis elegans Serpentine re... 29 4.7
Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z70781-3|CAA94833.2| 352|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81593-11|CAI94505.2| 360|Caenorhabditis elegans Hypothetical p... 28 8.2
Z81497-8|CAC70080.1| 707|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z75953-7|CAB00101.2| 707|Caenorhabditis elegans Hypothetical pr... 28 8.2
U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical pr... 28 8.2
U00181-1|AAA18259.1| 707|Caenorhabditis elegans protein kinase ... 28 8.2
>Z68214-5|CAA92446.2| 397|Caenorhabditis elegans Hypothetical
protein C10C5.5 protein.
Length = 397
Score = 94.3 bits (224), Expect = 8e-20
Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 LPSILLNSHMDVVPVFENSWKHPPFAA-EIEDNVIYARGVQDMKSVGIQYIEAVRRLKET 433
LPSI+L SH DVVP F W H P++A + ED I+ARG QDMK VG+Q +EA+R L
Sbjct: 67 LPSIMLYSHTDVVPTFREHWTHDPYSAFKDEDGNIFARGAQDMKCVGVQQMEALRNLFAQ 126
Query: 434 GVK-LKRTVHLSFVPDEEIGGDTGMGSSFRRT 526
G++ KRT+HL + PDEEI G GM F +T
Sbjct: 127 GIRQWKRTIHLVWGPDEEIFGINGM-KGFAKT 157
Score = 75.4 bits (177), Expect = 4e-14
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +1
Query: 511 FVQTDVFKNMNVGFALDEGVASPNDDYLVFNGERIIWHVKITCPGKSGHGSLLLPDNCGE 690
F +TD FK +N+GF+LDEG+ S +D Y VF ER+ W VK+T PG GHGS + + E
Sbjct: 154 FAKTDEFKKLNLGFSLDEGMPSDDDVYKVFYAERVAWWVKVTFPGNPGHGSQFMENTAME 213
Query: 691 KLRYIIDKFMDLRQE 735
KL + R E
Sbjct: 214 KLERFLASARKFRNE 228
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +3
Query: 78 SVSTLQNYLRIRSVHPNVDYNECINFLKNEAEKIGLQVQVVEPLPKKPTLVMTWLGEQP 254
+V+ + YLR+ + PN +Y C +FL A+++G+ + +E P ++MT G QP
Sbjct: 7 AVTRFREYLRVNTEQPNPNYAACRDFLFKYADELGIARRSIETAPGVFLVIMTIPGSQP 65
>Z68214-3|CAA92445.1| 399|Caenorhabditis elegans Hypothetical
protein C10C5.3 protein.
Length = 399
Score = 94.3 bits (224), Expect = 8e-20
Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 LPSILLNSHMDVVPVFENSWKHPPFAA-EIEDNVIYARGVQDMKSVGIQYIEAVRRLKET 433
LPSI+L SH DVVP F W H P++A + ED I+ARG QDMK VG+Q +EA+R L
Sbjct: 67 LPSIMLYSHTDVVPTFREHWTHDPYSAFKDEDGNIFARGAQDMKCVGVQQMEALRNLFAQ 126
Query: 434 GVK-LKRTVHLSFVPDEEIGGDTGMGSSFRRT 526
G++ KRT+HL + PDEEI G GM F +T
Sbjct: 127 GIRQWKRTIHLVWGPDEEIFGINGM-KGFAKT 157
Score = 75.8 bits (178), Expect = 3e-14
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Frame = +1
Query: 511 FVQTDVFKNMNVGFALDEGVASPNDDYLVFNGERIIWHVKITCPGKSGHGSLLLPDNCGE 690
F +TD FK +N+GF+LDEG+ S +D Y VF ER+ W VK+T PG GHGS + + E
Sbjct: 154 FAKTDEFKKLNLGFSLDEGMPSDDDVYKVFYAERVAWWVKVTFPGNPGHGSQFMENTAME 213
Query: 691 KL-RYIID--KFMD 723
KL RY+ KF D
Sbjct: 214 KLERYLASARKFRD 227
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +3
Query: 78 SVSTLQNYLRIRSVHPNVDYNECINFLKNEAEKIGLQVQVVEPLPKKPTLVMTWLGEQP 254
+V+ + YLR+ + PN DY C +FL A+++G+ + E +P ++MT G QP
Sbjct: 7 AVTRFREYLRVNTEQPNPDYAACRDFLFKYADELGIARRSFETVPGAIFVIMTIPGSQP 65
>U41012-2|AAV28364.1| 411|Caenorhabditis elegans Hypothetical
protein C06A6.4b protein.
Length = 411
Score = 93.1 bits (221), Expect = 2e-19
Identities = 47/85 (55%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = +2
Query: 257 LPSILLNSHMDVVPVFENSWKHPPFAA-EIEDNVIYARGVQDMKSVGIQYIEAVRRLKET 433
LPSI+L SH DVVP F W H P++A + ED I+ARG QDMK VG+QY+EA+R
Sbjct: 66 LPSIMLYSHTDVVPTFREYWTHDPYSAFKDEDGNIFARGAQDMKCVGVQYMEALRNWFAK 125
Query: 434 GVK-LKRTVHLSFVPDEEIGGDTGM 505
GVK RT+H+ + PDEEIG GM
Sbjct: 126 GVKQWTRTIHIVWGPDEEIGHINGM 150
Score = 75.4 bits (177), Expect = 4e-14
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +1
Query: 511 FVQTDVFKNMNVGFALDEGVASPNDDYLVFNGERIIWHVKITCPGKSGHGSLLLPDNCGE 690
F T+ FK +N+ FALDEG+A+ +D Y +F ERI W VK+T PG GHGS + E
Sbjct: 153 FAVTEEFKKLNIDFALDEGIATEDDVYKIFYAERIPWWVKVTLPGHPGHGSKFIEKTAIE 212
Query: 691 KLRYIIDKFMDLRQESVKKLA 753
KL +I + R E LA
Sbjct: 213 KLHKLIASVDEFRNEQKSLLA 233
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +3
Query: 72 DPSVSTLQNYLRIRSVHPNVDYNECINFLKNEAEKIGLQVQVVEPLPKKPTLVMTWLGEQ 251
D V+ + YLR+ + P DY C +FL A+++G++ + VE P ++MT G +
Sbjct: 4 DIGVTRFREYLRVNTEQPKPDYEACRDFLFKYADELGIERRSVETAPGTYFVIMTIPGSK 63
Query: 252 P 254
P
Sbjct: 64 P 64
>U41012-1|AAA82294.3| 397|Caenorhabditis elegans Hypothetical
protein C06A6.4a protein.
Length = 397
Score = 93.1 bits (221), Expect = 2e-19
Identities = 47/85 (55%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = +2
Query: 257 LPSILLNSHMDVVPVFENSWKHPPFAA-EIEDNVIYARGVQDMKSVGIQYIEAVRRLKET 433
LPSI+L SH DVVP F W H P++A + ED I+ARG QDMK VG+QY+EA+R
Sbjct: 66 LPSIMLYSHTDVVPTFREYWTHDPYSAFKDEDGNIFARGAQDMKCVGVQYMEALRNWFAK 125
Query: 434 GVK-LKRTVHLSFVPDEEIGGDTGM 505
GVK RT+H+ + PDEEIG GM
Sbjct: 126 GVKQWTRTIHIVWGPDEEIGHINGM 150
Score = 75.4 bits (177), Expect = 4e-14
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +1
Query: 511 FVQTDVFKNMNVGFALDEGVASPNDDYLVFNGERIIWHVKITCPGKSGHGSLLLPDNCGE 690
F T+ FK +N+ FALDEG+A+ +D Y +F ERI W VK+T PG GHGS + E
Sbjct: 153 FAVTEEFKKLNIDFALDEGIATEDDVYKIFYAERIPWWVKVTLPGHPGHGSKFIEKTAIE 212
Query: 691 KLRYIIDKFMDLRQESVKKLA 753
KL +I + R E LA
Sbjct: 213 KLHKLIASVDEFRNEQKSLLA 233
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +3
Query: 72 DPSVSTLQNYLRIRSVHPNVDYNECINFLKNEAEKIGLQVQVVEPLPKKPTLVMTWLGEQ 251
D V+ + YLR+ + P DY C +FL A+++G++ + VE P ++MT G +
Sbjct: 4 DIGVTRFREYLRVNTEQPKPDYEACRDFLFKYADELGIERRSVETAPGTYFVIMTIPGSK 63
Query: 252 P 254
P
Sbjct: 64 P 64
>Z68214-4|CAA92447.1| 397|Caenorhabditis elegans Hypothetical
protein C10C5.4 protein.
Length = 397
Score = 88.6 bits (210), Expect = 4e-18
Identities = 44/85 (51%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Frame = +2
Query: 257 LPSILLNSHMDVVPVFENSWKHPPFAA-EIEDNVIYARGVQDMKSVGIQYIEAVRRLKET 433
LPSI+L SH DVVP F W H P++A + ED I+ARG QD K +G+Q++EA R L
Sbjct: 67 LPSIMLYSHTDVVPTFREHWTHDPYSAFKDEDGNIFARGAQDTKCLGVQHVEAFRNLFAK 126
Query: 434 GVK-LKRTVHLSFVPDEEIGGDTGM 505
G K KRT+H+ + PDEE G GM
Sbjct: 127 GAKQWKRTIHVVWGPDEETGHINGM 151
Score = 75.4 bits (177), Expect = 4e-14
Identities = 34/80 (42%), Positives = 47/80 (58%)
Frame = +1
Query: 511 FVQTDVFKNMNVGFALDEGVASPNDDYLVFNGERIIWHVKITCPGKSGHGSLLLPDNCGE 690
FV+T+ FK +N+GF+LDEG AS N YL F ER+ W +K+T PG GHGS + + E
Sbjct: 154 FVETNEFKKLNIGFSLDEGHASENGVYLTFYAERVTWWLKVTAPGNPGHGSQFMENTAME 213
Query: 691 KLRYIIDKFMDLRQESVKKL 750
K+ + R E + L
Sbjct: 214 KIERFLASARAFRNEQKELL 233
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = +3
Query: 78 SVSTLQNYLRIRSVHPNVDYNECINFLKNEAEKIGLQVQVVEPLPKKPTLVMTWLGEQP 254
+V+ + YLR+ + PN DY C +FL A+++G++ + VE P ++MT G QP
Sbjct: 7 AVTRFREYLRVNTEQPNPDYVACRDFLFKYADEVGIERKAVETAPGVYFVIMTIPGSQP 65
>Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical
protein R11H6.1 protein.
Length = 473
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +2
Query: 263 SILLNSHMDVVPVFENS-WKHPPFAAEIEDNVIYARGVQDMKSVGIQYIEAVRRLKETGV 439
++L+ H+DV P ++ W PF +D ++ RG D K + + A+R ++ G+
Sbjct: 93 TLLVYGHLDVQPAAKSDGWDTEPFELVEKDGKLFGRGSSDDKGPVLCWFHAIRAAQKNGI 152
Query: 440 KLKRTVHLSFVPDEEIGGDTGMGSSFRRTSSK 535
L + EE G G+ R +
Sbjct: 153 DLPVNIKFCLEGMEE-SGSVGLPELLEREKDR 183
>AC024859-4|AAK29983.4| 472|Caenorhabditis elegans Hypothetical
protein Y71H2AM.11 protein.
Length = 472
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 263 SILLNSHMDVVPVF-ENSWKHPPFAAEIEDNVIYARGVQDMKSVGIQYIEAVRRLKETGV 439
++L+ H+DV P E+ W PF D ++ RG D K I +I ++ L+ G+
Sbjct: 93 TLLIYGHLDVQPAEKEDGWNTNPFELTEIDGKLFGRGSTDDKGPVIAWIAVLKVLQTLGI 152
Query: 440 KLKRTVHLSFV 472
L +++ FV
Sbjct: 153 DL--PINIKFV 161
>U39647-1|AAA80375.2| 351|Caenorhabditis elegans Hypothetical
protein C44E12.1 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +2
Query: 266 ILLNSHMDVVPVFENSWKHPPFAAEIEDNVIYARGVQDMKSVGIQYIEAVRRLKETGVKL 445
+LLN+H+D VP + PP + E N IY G D K + A + +T +
Sbjct: 71 VLLNTHLDTVPPY-----FPP--TQDEQN-IYGNGSNDAKGQLAAMVTAATIISKTDEDV 122
Query: 446 KRTVHLSFVPDEE 484
R + L FV EE
Sbjct: 123 ARALGLLFVVGEE 135
>Z81513-5|CAB04175.1| 332|Caenorhabditis elegans Hypothetical
protein F26D2.4 protein.
Length = 332
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -1
Query: 361 VNYIVFYFSSKGRMLPAVLEDRHHVHMRVE*YARQ-LGCSPNQVITNVGFFGKGSTT 194
+NY++ + + LPA LED R YARQ L C P Q+I + FF G+ T
Sbjct: 144 INYLLAFLA----FLPAALEDPDIARARE--YARQKLPCFPPQIIDSSRFFILGTDT 194
>U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical
protein C33H5.17 protein.
Length = 432
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -2
Query: 633 DFHMPNYSFAIEDQVVIVRGCDALIE 556
D+ +P+YSF +E+ +V+V+G + E
Sbjct: 153 DYQVPDYSFIVEEGLVLVKGMSDIWE 178
>AF068719-7|AAO21425.1| 399|Caenorhabditis elegans Uncoordinated
protein 23, isoform b protein.
Length = 399
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 569 TPSSRANPTFIFLKTSV*TNSPFQYRHQSPRRVQ--MTDAQSF*A*HRFPSASSRPQ 405
TP+S +PT + S +P QY Q P++ Q T S A R PS + P+
Sbjct: 80 TPTSTQSPTSTLRRNSQQNQAPPQYSQQQPQQAQQRQTTPPSTKASSRPPSRTREPK 136
>AF068719-6|AAV58864.1| 457|Caenorhabditis elegans Uncoordinated
protein 23, isoform c protein.
Length = 457
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 569 TPSSRANPTFIFLKTSV*TNSPFQYRHQSPRRVQ--MTDAQSF*A*HRFPSASSRPQ 405
TP+S +PT + S +P QY Q P++ Q T S A R PS + P+
Sbjct: 138 TPTSTQSPTSTLRRNSQQNQAPPQYSQQQPQQAQQRQTTPPSTKASSRPPSRTREPK 194
>AF068719-5|AAC17781.1| 458|Caenorhabditis elegans Uncoordinated
protein 23, isoform a protein.
Length = 458
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 569 TPSSRANPTFIFLKTSV*TNSPFQYRHQSPRRVQ--MTDAQSF*A*HRFPSASSRPQ 405
TP+S +PT + S +P QY Q P++ Q T S A R PS + P+
Sbjct: 139 TPTSTQSPTSTLRRNSQQNQAPPQYSQQQPQQAQQRQTTPPSTKASSRPPSRTREPK 195
>AC084154-6|AAO91684.1| 319|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 64 protein.
Length = 319
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 60 SVKIDPSVSTLQNYLRIRSVHPNVDYNECINF-LKNEAEKIGLQVQVVEPL 209
++K PS L + R++HP++DY +NF ++A+K+ L + L
Sbjct: 145 AIKFIPSPDHLAVHNETRTLHPDLDYTPYLNFGGYSQAQKVFLDRSAIVTL 195
>Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical
protein C10C6.6 protein.
Length = 1178
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 589 YLVFNGERIIWHVKITCPGKSGHGSLLLPD-NC 684
+++F G +I+ H T PGK+ G + PD NC
Sbjct: 331 HVIFGGTKIVQH---TAPGKAAEGMVKSPDGNC 360
>Z70781-3|CAA94833.2| 352|Caenorhabditis elegans Hypothetical
protein F57A8.5 protein.
Length = 352
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 160 KMKLKRLDYKCKWSNLC 210
+M +++L Y CKWSN C
Sbjct: 44 RMSVQKLVYNCKWSNNC 60
>Z81593-11|CAI94505.2| 360|Caenorhabditis elegans Hypothetical
protein T20B3.16 protein.
Length = 360
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 48 HTTSSVKIDPSVSTLQNYLRIRSVHPNVDYNECINFLKNEAEKIG 182
+TTSS D T + Y HPNV EC+ + ++G
Sbjct: 166 NTTSSCIWDKFSGTAEGYDNFAPGHPNVTIGECVT-INTRGSRVG 209
>Z81497-8|CAC70080.1| 707|Caenorhabditis elegans Hypothetical
protein F57F5.5 protein.
Length = 707
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 499 WNGEFVQTDVFKNMNVGFALDEGVASPNDDYL 594
WN EF + V + +GF++ P DD++
Sbjct: 63 WNEEFTASGVHQGKAIGFSVFHSCVMPPDDFV 94
>Z75953-7|CAB00101.2| 707|Caenorhabditis elegans Hypothetical
protein F57F5.5 protein.
Length = 707
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 499 WNGEFVQTDVFKNMNVGFALDEGVASPNDDYL 594
WN EF + V + +GF++ P DD++
Sbjct: 63 WNEEFTASGVHQGKAIGFSVFHSCVMPPDDFV 94
>U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical
protein W05H9.2 protein.
Length = 851
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = +3
Query: 3 RDCTPFCLISAMLRIHTTSSVKIDPSVSTLQNYLRIRSVHPNVDYNECINFLKNEAEK 176
++C ++ ++ ++ V +V Q+Y +I + V +++C+ KN AEK
Sbjct: 58 KNCRDSQRLARFMKPNSFEEVPKFETVDEFQDYFKISILERRVTFDQCLFISKNYAEK 115
>U00181-1|AAA18259.1| 707|Caenorhabditis elegans protein kinase C
protein.
Length = 707
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 499 WNGEFVQTDVFKNMNVGFALDEGVASPNDDYL 594
WN EF + V + +GF++ P DD++
Sbjct: 63 WNEEFTASGVHQGKAIGFSVFHSCVMPPDDFV 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,746,800
Number of Sequences: 27780
Number of extensions: 383377
Number of successful extensions: 1250
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1240
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -