Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00271
(758 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 139 2e-33
05_01_0585 - 5237547-5237930,5237995-5238072,5238163-5238405,523... 138 3e-33
01_06_0670 + 31069976-31070073,31070461-31070581,31070669-310707... 135 4e-32
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 105 3e-23
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351... 105 4e-23
01_06_0551 + 30159789-30159946,30160509-30160629,30160714-301607... 94 9e-20
02_05_0228 - 27010982-27011272,27011401-27011506,27011616-270117... 90 2e-18
03_06_0690 - 35571816-35572586 29 4.0
03_01_0633 - 4649267-4649383,4649480-4649641,4649735-4649895,465... 29 5.3
03_01_0026 + 246682-246866,247791-247915,248452-248625,249377-24... 29 5.3
09_04_0389 + 17239182-17239316,17240246-17240878 28 7.0
06_03_0501 + 21476715-21476785,21477045-21477786,21478097-214782... 28 7.0
04_04_0946 - 29579779-29580004,29580098-29580210 28 9.3
04_04_0406 + 24978845-24978970,24979073-24979142,24979541-249795... 28 9.3
04_04_0207 + 23602065-23604315,23604611-23605116 28 9.3
01_01_0538 - 3938389-3939727,3939828-3940203,3940299-3940516,394... 28 9.3
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 139 bits (337), Expect = 2e-33
Identities = 62/83 (74%), Positives = 72/83 (86%)
Frame = +3
Query: 6 VYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPIT 185
V DVL+NWPE +++ IVVTDGERILGLGDLG GMGIPVGKL+LYTALGG++P CLPIT
Sbjct: 218 VLDVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPIT 277
Query: 186 IDVGTNTQSMLDDPLYIGLRQRR 254
IDVGTN + +L+D YIGLRQRR
Sbjct: 278 IDVGTNNEQLLNDEFYIGLRQRR 300
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/82 (42%), Positives = 48/82 (58%)
Frame = +2
Query: 260 GPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQXXXXXX 439
G +Y EL++EFM AV + YG+ L+QFEDF N NAF LL KY + FNDDIQ
Sbjct: 303 GKEYHELMEEFMSAVKQIYGEKVLIQFEDFANHNAFDLLAKYSKSHLVFNDDIQGTASVV 362
Query: 440 XXXXXXSLRLTQKRLSDNVIVF 505
SL++ L+++ +F
Sbjct: 363 LAGLLSSLKVVGGTLAEHTYLF 384
Score = 34.7 bits (76), Expect = 0.081
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 574 PEQEARCRIWMVDSKGLIVKNRPEEDLTFTR 666
P +E R ++W++DSKGLIV +R E F +
Sbjct: 409 PIEECRKKVWLLDSKGLIVNSRKESLQAFKK 439
Score = 34.7 bits (76), Expect = 0.081
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 651 LNVHKERFAQDHAPVRTLAEVVEVARPSVLIGAAAI 758
L K+ +A +H PV TL + V+ +P+VLIG + +
Sbjct: 434 LQAFKKPWAHEHEPVTTLLDAVQSIKPTVLIGTSGV 469
>05_01_0585 -
5237547-5237930,5237995-5238072,5238163-5238405,
5238515-5238661,5238780-5238863,5238969-5239040,
5239153-5239248,5239345-5239410,5239537-5239642,
5239749-5239900,5240238-5240433,5240791-5240879
Length = 570
Score = 138 bits (335), Expect = 3e-33
Identities = 61/83 (73%), Positives = 72/83 (86%)
Frame = +3
Query: 6 VYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPIT 185
+ +VLKNWPE ++ IVVTDGERILGLGDLG GMGIPVGKL+LYTALGG++P CLPIT
Sbjct: 149 ILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPIT 208
Query: 186 IDVGTNTQSMLDDPLYIGLRQRR 254
IDVGTN +S+L+D YIGL+QRR
Sbjct: 209 IDVGTNNESLLNDEFYIGLKQRR 231
Score = 76.2 bits (179), Expect = 3e-14
Identities = 37/82 (45%), Positives = 48/82 (58%)
Frame = +2
Query: 260 GPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQXXXXXX 439
G +Y ELL+EFM AV + YG+ LVQFEDF N NAF LL KY + FNDDIQ
Sbjct: 234 GEEYHELLEEFMTAVKQNYGEKVLVQFEDFANHNAFDLLAKYSKSHLVFNDDIQGTASVV 293
Query: 440 XXXXXXSLRLTQKRLSDNVIVF 505
+L++ L+D+ +F
Sbjct: 294 LAGLIAALKVVGGTLADHTYLF 315
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 663 KERFAQDHAPVRTLAEVVEVARPSVLIGAAAI 758
K+ FA +H PV+TL E V+ +P+VLIG + +
Sbjct: 369 KQPFAHEHEPVKTLLEAVQSIKPTVLIGTSGV 400
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 574 PEQEARCRIWMVDSKGLIVKNRPE 645
P + R ++W+VDS+GLIV++R E
Sbjct: 340 PINDCRKKVWLVDSRGLIVESRKE 363
>01_06_0670 +
31069976-31070073,31070461-31070581,31070669-31070743,
31070863-31071014,31071171-31071276,31071409-31071474,
31071562-31071657,31071764-31071835,31071925-31072008,
31072147-31072245,31072721-31072768,31072857-31072910,
31072991-31073089,31073182-31073271,31073371-31073448,
31073584-31073658,31073806-31073896,31074014-31074142,
31074235-31074323
Length = 573
Score = 135 bits (326), Expect = 4e-32
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = +3
Query: 6 VYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPIT 185
+ ++L+NWPE ++ IVVTDGERILGLGDLG GMGIPVGKLALYTALGG++P CLPIT
Sbjct: 152 ILELLRNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPIT 211
Query: 186 IDVGTNTQSMLDDPLYIGLRQRR 254
IDVGTN + +L D YIGLRQ+R
Sbjct: 212 IDVGTNNEDLLKDEFYIGLRQKR 234
Score = 79.0 bits (186), Expect = 4e-15
Identities = 38/82 (46%), Positives = 47/82 (57%)
Frame = +2
Query: 260 GPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQXXXXXX 439
G +Y +LLDEFM A+ + YGQ LVQFEDF N NAF LLEKYR FNDDIQ
Sbjct: 237 GQEYSDLLDEFMAAIKQNYGQKVLVQFEDFANYNAFTLLEKYRANNLVFNDDIQGTAAVV 296
Query: 440 XXXXXXSLRLTQKRLSDNVIVF 505
+ + L+D+ +F
Sbjct: 297 LAGLIAAQKFVSGTLADHTFLF 318
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +3
Query: 651 LNVHKERFAQDHAPVRTLAEVVEVARPSVLIGAAAI 758
L K+R+A +H PV+ L + V+V +P+ LIG+A +
Sbjct: 368 LQPFKKRYAHEHEPVKDLLDAVKVIKPTALIGSAGV 403
Score = 36.3 bits (80), Expect = 0.026
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 574 PEQEARCRIWMVDSKGLIVKNRPEEDLTFTRR 669
P ++AR +IW++DSKGLIV +R + F +R
Sbjct: 343 PVEDARKKIWLLDSKGLIVSSRKDSLQPFKKR 374
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 105 bits (253), Expect = 3e-23
Identities = 48/80 (60%), Positives = 58/80 (72%)
Frame = +3
Query: 15 VLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITIDV 194
++ NWP V IVVTDG RILGLGDLG G+GIP+GKL +Y A GI P + LPI +DV
Sbjct: 177 MIYNWPAEKVDMIVVTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQKVLPIMLDV 236
Query: 195 GTNTQSMLDDPLYIGLRQRR 254
GTN +L+D LY+GLRQ R
Sbjct: 237 GTNNTKLLEDKLYLGLRQPR 256
>07_03_0474 +
18534071-18534238,18534349-18534445,18534992-18535122,
18535191-18535286,18535459-18535464,18535521-18535688,
18535892-18536020,18536613-18536673,18536928-18537031,
18537137-18537220,18538433-18538461,18538506-18538617,
18539200-18539313,18539767-18539832,18540237-18540309,
18540396-18540482,18540710-18540764,18540869-18540940,
18541039-18541101,18541177-18541294,18541377-18541451
Length = 635
Score = 105 bits (252), Expect = 4e-23
Identities = 47/77 (61%), Positives = 56/77 (72%)
Frame = +3
Query: 24 NWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITIDVGTN 203
NWP V IVVTDG RILGLGDLG G+GI +GKL LY A GI P + LP+ IDVGTN
Sbjct: 217 NWPADQVDMIVVTDGSRILGLGDLGVHGIGIAIGKLDLYVAAAGINPQRVLPVMIDVGTN 276
Query: 204 TQSMLDDPLYIGLRQRR 254
+ +L DPLY+GL++ R
Sbjct: 277 NEKLLKDPLYLGLQEHR 293
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +2
Query: 254 LRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQ 421
L G +Y ++DEFM AV R+ N +VQFEDF + AFRLL++YR Y FNDD+Q
Sbjct: 294 LEGEEYVAIIDEFMEAVFARW-PNVIVQFEDFQSKWAFRLLQRYRKTYRMFNDDVQ 348
>01_06_0551 +
30159789-30159946,30160509-30160629,30160714-30160788,
30160877-30161028,30161103-30161208,30161298-30161363,
30161623-30161694,30161849-30161932,30162108-30162206,
30162841-30162888,30162986-30163039,30163137-30163235,
30163321-30163410,30163503-30163580,30163699-30163773,
30163866-30163956,30164282-30164410,30164501-30164589
Length = 561
Score = 94.3 bits (224), Expect = 9e-20
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +3
Query: 6 VYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKP 164
+ +VLKNWPE ++ IVVTDGERILGLGDLG GMGIPVGKLALYTALGG++P
Sbjct: 172 ILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRP 224
Score = 72.9 bits (171), Expect = 2e-13
Identities = 37/99 (37%), Positives = 52/99 (52%)
Frame = +2
Query: 209 VDAGRPAVHRAPAAALRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYR 388
+ G+ A++ A +Y + L EFM AV + YG+ L+QFEDF N NAF LL KY
Sbjct: 208 IPVGKLALYTALGGVRPSAEYADFLHEFMTAVKQNYGEKVLIQFEDFANHNAFELLAKYG 267
Query: 389 NKYCTFNDDIQXXXXXXXXXXXXSLRLTQKRLSDNVIVF 505
+ FNDDIQ +L+L LS++ +F
Sbjct: 268 TTHLVFNDDIQGTASVVLSGLVAALKLVGGSLSEHSYLF 306
Score = 35.9 bits (79), Expect = 0.035
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 574 PEQEARCRIWMVDSKGLIVKNRPE 645
P +E R +IW+VDSKGLIV +R E
Sbjct: 331 PIEECRKKIWLVDSKGLIVSSRKE 354
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 663 KERFAQDHAPVRTLAEVVEVARPSVLIGAA 752
K+ +A +H PV L + V+ +P+VLIG +
Sbjct: 360 KKPWAHEHEPVGNLLDAVKTIKPTVLIGTS 389
>02_05_0228 -
27010982-27011272,27011401-27011506,27011616-27011767,
27011919-27011930
Length = 186
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/52 (73%), Positives = 46/52 (88%)
Frame = +3
Query: 6 VYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIK 161
+ +VLKNWPE ++ IV+TDGERILGLGDLG GMGIPVGKL+LYTALGG++
Sbjct: 58 ILEVLKNWPERSIQVIVITDGERILGLGDLGCQGMGIPVGKLSLYTALGGVR 109
>03_06_0690 - 35571816-35572586
Length = 256
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 149 RRHQASSVSTHHYRRGYEHPVDAGRPAVHRAPAAALRG 262
RRH +S S+H HP DA P H + AA RG
Sbjct: 76 RRHHKTSSSSHPRPPRRAHPEDALDPLNHSSAAAHRRG 113
>03_01_0633 -
4649267-4649383,4649480-4649641,4649735-4649895,
4650056-4650080,4650155-4650237,4650332-4650704
Length = 306
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 123 GKLALYTALGGIKPHQCLPITIDVGTNTQSMLD 221
GK + + GG+KP Q +PI D N + LD
Sbjct: 241 GKCVMGSLFGGVKPKQDIPILADKYLNKELELD 273
>03_01_0026 +
246682-246866,247791-247915,248452-248625,249377-249467,
249516-250554
Length = 537
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 631 KNRPEEDLTFTRRDSLRTTRPSGPWLKLWKWPDRRCL 741
+NR E+ R+ S R+ +LW +P+RRCL
Sbjct: 46 RNRKEDSSRGVRKTSDRSRTEGFSLQRLWFFPERRCL 82
>09_04_0389 + 17239182-17239316,17240246-17240878
Length = 255
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -2
Query: 481 PLLCESETGE*SGHRHGRRPLDVVVESAVLVPILLEEPKSVSVPEVLELHETVLPV 314
P LC ++ + H P+++V L +LL ++ + EVLE +T +PV
Sbjct: 127 PWLCAADAAPQAALNHASPPMELVDRLQALGRVLLGRRQTRHLVEVLESAKTRVPV 182
>06_03_0501 +
21476715-21476785,21477045-21477786,21478097-21478246,
21478350-21478589,21479968-21480048,21480144-21480185,
21480953-21481033,21481271-21481368,21482574-21482667,
21482733-21482861,21483881-21483931,21484023-21484049,
21484280-21484387,21484956-21485201
Length = 719
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 755 GGRSNKHRRSGHFHNFSQGPDGR-VVLSESLLVNVKSSS 642
GG N GH H +GP R VV+S+ L + + S S
Sbjct: 243 GGAVNDAHAHGHGHGHEEGPSARHVVVSQILELGIVSHS 281
>04_04_0946 - 29579779-29580004,29580098-29580210
Length = 112
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 7/52 (13%)
Frame = +2
Query: 131 RALHRARRHQAS-SVST------HHYRRGYEHPVDAGRPAVHRAPAAALRGP 265
RA HR ++ A+ +VS HH+ + H RPA+ P RGP
Sbjct: 57 RAKHRRKKRAAAHAVSVRKEHRNHHHHHRHHHQQPQPRPAIDANPWGTARGP 108
>04_04_0406 +
24978845-24978970,24979073-24979142,24979541-24979556,
24979813-24979930,24980015-24980137,24980249-24980408,
24980470-24980546,24980635-24980687,24981263-24981317,
24981664-24981858
Length = 330
Score = 27.9 bits (59), Expect = 9.3
Identities = 25/72 (34%), Positives = 31/72 (43%)
Frame = +2
Query: 92 FGRVRDGHPCGQTRALHRARRHQASSVSTHHYRRGYEHPVDAGRPAVHRAPAAALRGPDY 271
FG V DGH + R+QA+S Y G E+ AGR + AP + GP Y
Sbjct: 58 FG-VYDGHGGSAVARMDEMLRNQAASKELTEYGSGNEYWRTAGRSWLRCAP--CVLGPVY 114
Query: 272 DELLDEFMRAVV 307
L E A V
Sbjct: 115 CGPLAEGCTACV 126
>04_04_0207 + 23602065-23604315,23604611-23605116
Length = 918
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +1
Query: 157 SSLISVYPSLSTWVRTPSRC-WT-TRCTSGSGSG 252
SSL +LSTW R+ C W+ CT+G G G
Sbjct: 49 SSLNDPSGALSTWSRSTPYCNWSHVTCTAGGGGG 82
>01_01_0538 -
3938389-3939727,3939828-3940203,3940299-3940516,
3940607-3940769,3940866-3941100,3941186-3941353
Length = 832
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 547 VMAMKGEGTPEQEARCRIWMVDSKGLIVKNRPEE-DLTFTRRDSLRTTR--PSGPWLKLW 717
++ + G+G EQ+ RCR +K R EE + F R DS R R PS P L
Sbjct: 730 IVEVGGDGATEQQDRCR------NSFEIKERGEEKKIWFPRSDSSRGFRSLPSSPSKILG 783
Query: 718 KWPDRRCLLERP 753
C+ +P
Sbjct: 784 MRRGVECMSRKP 795
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,055,544
Number of Sequences: 37544
Number of extensions: 422683
Number of successful extensions: 1532
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1531
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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