BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00271
(758 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77244-1|CAA54460.1| 572|Homo sapiens malate dehydrogenase (oxa... 133 8e-31
U43944-1|AAC50613.1| 565|Homo sapiens cytosolic NADP(+)-depende... 133 8e-31
L34035-1|AAB01380.1| 572|Homo sapiens NADP-dependent malic enzy... 133 8e-31
BC025246-1|AAH25246.1| 572|Homo sapiens malic enzyme 1, NADP(+)... 133 8e-31
AL391416-2|CAH73129.1| 572|Homo sapiens malic enzyme 1, NADP(+)... 133 8e-31
AL136970-1|CAC19505.2| 572|Homo sapiens malic enzyme 1, NADP(+)... 133 8e-31
AL049699-1|CAI22634.1| 572|Homo sapiens malic enzyme 1, NADP(+)... 133 8e-31
AK223417-1|BAD97137.1| 572|Homo sapiens cytosolic malic enzyme ... 133 8e-31
X79440-1|CAA55956.1| 604|Homo sapiens malate dehydrogenase (oxa... 132 1e-30
BC022472-1|AAH22472.1| 604|Homo sapiens malic enzyme 3, NADP(+)... 132 1e-30
AY424278-1|AAR04784.1| 259|Homo sapiens mitochondrial NADP(+)-d... 132 1e-30
AK092181-1|BAC03822.1| 252|Homo sapiens protein ( Homo sapiens ... 132 1e-30
M55905-1|AAA36197.1| 584|Homo sapiens mitochondrial NAD(P)+ -de... 126 9e-29
BC000147-1|AAH00147.1| 479|Homo sapiens ME2 protein protein. 126 9e-29
BC017403-1|AAH17403.1| 233|Homo sapiens Unknown (protein for IM... 36 0.16
Y10931-1|CAA71861.1| 1142|Homo sapiens symplekin protein. 33 1.1
U49240-1|AAC50667.1| 1142|Homo sapiens symplekin protein. 33 1.1
BC006567-1|AAH06567.1| 1142|Homo sapiens SYMPK protein protein. 33 1.1
BC006536-1|AAH06536.1| 1142|Homo sapiens SYMPK protein protein. 33 1.1
AF057699-1|AAQ13438.1| 520|Homo sapiens EIF-2B-delta-like prote... 32 2.0
BC091502-1|AAH91502.1| 523|Homo sapiens eukaryotic translation ... 31 3.4
BC001870-1|AAH01870.1| 523|Homo sapiens eukaryotic translation ... 31 3.4
AJ011307-2|CAB57305.1| 542|Homo sapiens guanine nucleotide exch... 31 3.4
AJ011307-1|CAB57304.1| 522|Homo sapiens guanine nucleotide exch... 31 3.4
AJ011306-1|CAB57261.1| 543|Homo sapiens guanine nucleotide exch... 31 3.4
AJ011305-1|CAB57260.1| 522|Homo sapiens guanine nucleotide exch... 31 3.4
AF218009-1|AAG17251.1| 229|Homo sapiens unknown protein. 31 3.4
AF112207-1|AAF17195.1| 523|Homo sapiens translation initiation ... 31 3.4
AC074117-8|AAY14843.1| 522|Homo sapiens unknown protein. 31 3.4
>X77244-1|CAA54460.1| 572|Homo sapiens malate dehydrogenase
(oxaloacetate decarboxylating) (NADP+) protein.
Length = 572
Score = 133 bits (321), Expect = 8e-31
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +3
Query: 3 HVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPI 182
H+ VL WPE ++AIVVTDGERILGLGDLG GMGIPVGKLALYTA GG+ P +CLP+
Sbjct: 132 HIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPV 191
Query: 183 TIDVGTNTQSMLDDPLYIGLRQRR 254
+DVGT + +L DPLYIGLRQRR
Sbjct: 192 ILDVGTENEELLKDPLYIGLRQRR 215
Score = 114 bits (275), Expect = 3e-25
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = +2
Query: 254 LRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQXXXX 433
+RG +YD+ LDEFM AV +YG NCL+QFEDF N NAFRLL KYRN+YCTFNDDIQ
Sbjct: 216 VRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYCTFNDDIQGTAS 275
Query: 434 XXXXXXXXSLRLTQKRLSDNVIVFQ 508
+LR+T+ +LSD I+FQ
Sbjct: 276 VAVAGLLAALRITKNKLSDQTILFQ 300
Score = 44.0 bits (99), Expect = 6e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +1
Query: 547 VMAMKGEGTPEQEARCRIWMVDSKGLIVKNR 639
VMA++ EG P+++A +IW+VDSKGLIVK R
Sbjct: 314 VMALEKEGLPKEKAIKKIWLVDSKGLIVKGR 344
Score = 35.9 bits (79), Expect = 0.16
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 651 LNVHKERFAQDHAPVRTLAEVVEVARPSVLIGAAAI 758
L KE+FA +H ++ L +V+ +P+ LIG AAI
Sbjct: 347 LTQEKEKFAHEHEEMKNLEAIVQEIKPTALIGVAAI 382
>U43944-1|AAC50613.1| 565|Homo sapiens cytosolic NADP(+)-dependent
malic enzyme protein.
Length = 565
Score = 133 bits (321), Expect = 8e-31
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +3
Query: 3 HVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPI 182
H+ VL WPE ++AIVVTDGERILGLGDLG GMGIPVGKLALYTA GG+ P +CLP+
Sbjct: 125 HIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPV 184
Query: 183 TIDVGTNTQSMLDDPLYIGLRQRR 254
+DVGT + +L DPLYIGLRQRR
Sbjct: 185 ILDVGTENEELLKDPLYIGLRQRR 208
Score = 114 bits (275), Expect = 3e-25
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = +2
Query: 254 LRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQXXXX 433
+RG +YD+ LDEFM AV +YG NCL+QFEDF N NAFRLL KYRN+YCTFNDDIQ
Sbjct: 209 VRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYCTFNDDIQGTAS 268
Query: 434 XXXXXXXXSLRLTQKRLSDNVIVFQ 508
+LR+T+ +LSD I+FQ
Sbjct: 269 VAVAGLLAALRITKNKLSDQTILFQ 293
Score = 44.0 bits (99), Expect = 6e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +1
Query: 547 VMAMKGEGTPEQEARCRIWMVDSKGLIVKNR 639
VMA++ EG P+++A +IW+VDSKGLIVK R
Sbjct: 307 VMALEKEGLPKEKAIKKIWLVDSKGLIVKGR 337
Score = 35.9 bits (79), Expect = 0.16
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 651 LNVHKERFAQDHAPVRTLAEVVEVARPSVLIGAAAI 758
L KE+FA +H ++ L +V+ +P+ LIG AAI
Sbjct: 340 LTQEKEKFAHEHEEMKNLEAIVQEIKPTALIGVAAI 375
>L34035-1|AAB01380.1| 572|Homo sapiens NADP-dependent malic enzyme
protein.
Length = 572
Score = 133 bits (321), Expect = 8e-31
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +3
Query: 3 HVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPI 182
H+ VL WPE ++AIVVTDGERILGLGDLG GMGIPVGKLALYTA GG+ P +CLP+
Sbjct: 132 HIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPV 191
Query: 183 TIDVGTNTQSMLDDPLYIGLRQRR 254
+DVGT + +L DPLYIGLRQRR
Sbjct: 192 ILDVGTENEELLKDPLYIGLRQRR 215
Score = 114 bits (275), Expect = 3e-25
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = +2
Query: 254 LRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQXXXX 433
+RG +YD+ LDEFM AV +YG NCL+QFEDF N NAFRLL KYRN+YCTFNDDIQ
Sbjct: 216 VRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYCTFNDDIQGTAS 275
Query: 434 XXXXXXXXSLRLTQKRLSDNVIVFQ 508
+LR+T+ +LSD I+FQ
Sbjct: 276 VAVAGLLAALRITKNKLSDQTILFQ 300
Score = 44.0 bits (99), Expect = 6e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +1
Query: 547 VMAMKGEGTPEQEARCRIWMVDSKGLIVKNR 639
VMA++ EG P+++A +IW+VDSKGLIVK R
Sbjct: 314 VMALEKEGLPKEKAIKKIWLVDSKGLIVKGR 344
Score = 35.9 bits (79), Expect = 0.16
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 651 LNVHKERFAQDHAPVRTLAEVVEVARPSVLIGAAAI 758
L KE+FA +H ++ L +V+ +P+ LIG AAI
Sbjct: 347 LTQEKEKFAHEHEEMKNLEAIVQEIKPTALIGVAAI 382
>BC025246-1|AAH25246.1| 572|Homo sapiens malic enzyme 1,
NADP(+)-dependent, cytosolic protein.
Length = 572
Score = 133 bits (321), Expect = 8e-31
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +3
Query: 3 HVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPI 182
H+ VL WPE ++AIVVTDGERILGLGDLG GMGIPVGKLALYTA GG+ P +CLP+
Sbjct: 132 HIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPV 191
Query: 183 TIDVGTNTQSMLDDPLYIGLRQRR 254
+DVGT + +L DPLYIGLRQRR
Sbjct: 192 ILDVGTENEELLKDPLYIGLRQRR 215
Score = 114 bits (275), Expect = 3e-25
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = +2
Query: 254 LRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQXXXX 433
+RG +YD+ LDEFM AV +YG NCL+QFEDF N NAFRLL KYRN+YCTFNDDIQ
Sbjct: 216 VRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYCTFNDDIQGTAS 275
Query: 434 XXXXXXXXSLRLTQKRLSDNVIVFQ 508
+LR+T+ +LSD I+FQ
Sbjct: 276 VAVAGLLAALRITKNKLSDQTILFQ 300
Score = 44.0 bits (99), Expect = 6e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +1
Query: 547 VMAMKGEGTPEQEARCRIWMVDSKGLIVKNR 639
VMA++ EG P+++A +IW+VDSKGLIVK R
Sbjct: 314 VMALEKEGLPKEKAIKKIWLVDSKGLIVKGR 344
Score = 35.9 bits (79), Expect = 0.16
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 651 LNVHKERFAQDHAPVRTLAEVVEVARPSVLIGAAAI 758
L KE+FA +H ++ L +V+ +P+ LIG AAI
Sbjct: 347 LTQEKEKFAHEHEEMKNLEAIVQEIKPTALIGVAAI 382
>AL391416-2|CAH73129.1| 572|Homo sapiens malic enzyme 1,
NADP(+)-dependent, cytosolic protein.
Length = 572
Score = 133 bits (321), Expect = 8e-31
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +3
Query: 3 HVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPI 182
H+ VL WPE ++AIVVTDGERILGLGDLG GMGIPVGKLALYTA GG+ P +CLP+
Sbjct: 132 HIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPV 191
Query: 183 TIDVGTNTQSMLDDPLYIGLRQRR 254
+DVGT + +L DPLYIGLRQRR
Sbjct: 192 ILDVGTENEELLKDPLYIGLRQRR 215
Score = 114 bits (275), Expect = 3e-25
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = +2
Query: 254 LRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQXXXX 433
+RG +YD+ LDEFM AV +YG NCL+QFEDF N NAFRLL KYRN+YCTFNDDIQ
Sbjct: 216 VRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYCTFNDDIQGTAS 275
Query: 434 XXXXXXXXSLRLTQKRLSDNVIVFQ 508
+LR+T+ +LSD I+FQ
Sbjct: 276 VAVAGLLAALRITKNKLSDQTILFQ 300
Score = 44.0 bits (99), Expect = 6e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +1
Query: 547 VMAMKGEGTPEQEARCRIWMVDSKGLIVKNR 639
VMA++ EG P+++A +IW+VDSKGLIVK R
Sbjct: 314 VMALEKEGLPKEKAIKKIWLVDSKGLIVKGR 344
Score = 35.9 bits (79), Expect = 0.16
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 651 LNVHKERFAQDHAPVRTLAEVVEVARPSVLIGAAAI 758
L KE+FA +H ++ L +V+ +P+ LIG AAI
Sbjct: 347 LTQEKEKFAHEHEEMKNLEAIVQEIKPTALIGVAAI 382
>AL136970-1|CAC19505.2| 572|Homo sapiens malic enzyme 1,
NADP(+)-dependent, cytosolic protein.
Length = 572
Score = 133 bits (321), Expect = 8e-31
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +3
Query: 3 HVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPI 182
H+ VL WPE ++AIVVTDGERILGLGDLG GMGIPVGKLALYTA GG+ P +CLP+
Sbjct: 132 HIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPV 191
Query: 183 TIDVGTNTQSMLDDPLYIGLRQRR 254
+DVGT + +L DPLYIGLRQRR
Sbjct: 192 ILDVGTENEELLKDPLYIGLRQRR 215
Score = 114 bits (275), Expect = 3e-25
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = +2
Query: 254 LRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQXXXX 433
+RG +YD+ LDEFM AV +YG NCL+QFEDF N NAFRLL KYRN+YCTFNDDIQ
Sbjct: 216 VRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYCTFNDDIQGTAS 275
Query: 434 XXXXXXXXSLRLTQKRLSDNVIVFQ 508
+LR+T+ +LSD I+FQ
Sbjct: 276 VAVAGLLAALRITKNKLSDQTILFQ 300
Score = 44.0 bits (99), Expect = 6e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +1
Query: 547 VMAMKGEGTPEQEARCRIWMVDSKGLIVKNR 639
VMA++ EG P+++A +IW+VDSKGLIVK R
Sbjct: 314 VMALEKEGLPKEKAIKKIWLVDSKGLIVKGR 344
Score = 35.9 bits (79), Expect = 0.16
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 651 LNVHKERFAQDHAPVRTLAEVVEVARPSVLIGAAAI 758
L KE+FA +H ++ L +V+ +P+ LIG AAI
Sbjct: 347 LTQEKEKFAHEHEEMKNLEAIVQEIKPTALIGVAAI 382
>AL049699-1|CAI22634.1| 572|Homo sapiens malic enzyme 1,
NADP(+)-dependent, cytosolic protein.
Length = 572
Score = 133 bits (321), Expect = 8e-31
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +3
Query: 3 HVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPI 182
H+ VL WPE ++AIVVTDGERILGLGDLG GMGIPVGKLALYTA GG+ P +CLP+
Sbjct: 132 HIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPV 191
Query: 183 TIDVGTNTQSMLDDPLYIGLRQRR 254
+DVGT + +L DPLYIGLRQRR
Sbjct: 192 ILDVGTENEELLKDPLYIGLRQRR 215
Score = 114 bits (275), Expect = 3e-25
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = +2
Query: 254 LRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQXXXX 433
+RG +YD+ LDEFM AV +YG NCL+QFEDF N NAFRLL KYRN+YCTFNDDIQ
Sbjct: 216 VRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYCTFNDDIQGTAS 275
Query: 434 XXXXXXXXSLRLTQKRLSDNVIVFQ 508
+LR+T+ +LSD I+FQ
Sbjct: 276 VAVAGLLAALRITKNKLSDQTILFQ 300
Score = 44.0 bits (99), Expect = 6e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +1
Query: 547 VMAMKGEGTPEQEARCRIWMVDSKGLIVKNR 639
VMA++ EG P+++A +IW+VDSKGLIVK R
Sbjct: 314 VMALEKEGLPKEKAIKKIWLVDSKGLIVKGR 344
Score = 35.9 bits (79), Expect = 0.16
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 651 LNVHKERFAQDHAPVRTLAEVVEVARPSVLIGAAAI 758
L KE+FA +H ++ L +V+ +P+ LIG AAI
Sbjct: 347 LTQEKEKFAHEHEEMKNLEAIVQEIKPTALIGVAAI 382
>AK223417-1|BAD97137.1| 572|Homo sapiens cytosolic malic enzyme 1
variant protein.
Length = 572
Score = 133 bits (321), Expect = 8e-31
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +3
Query: 3 HVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPI 182
H+ VL WPE ++AIVVTDGERILGLGDLG GMGIPVGKLALYTA GG+ P +CLP+
Sbjct: 132 HIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPV 191
Query: 183 TIDVGTNTQSMLDDPLYIGLRQRR 254
+DVGT + +L DPLYIGLRQRR
Sbjct: 192 ILDVGTENEELLKDPLYIGLRQRR 215
Score = 111 bits (267), Expect = 3e-24
Identities = 49/85 (57%), Positives = 60/85 (70%)
Frame = +2
Query: 254 LRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQXXXX 433
+RG +YD+ LDEFM AV +YG NCL+QFEDF N NAFRLL KYRN+YCT NDDIQ
Sbjct: 216 VRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYCTSNDDIQGTAS 275
Query: 434 XXXXXXXXSLRLTQKRLSDNVIVFQ 508
+LR+T+ +LSD I+FQ
Sbjct: 276 VAVAGLLAALRITKNKLSDQTILFQ 300
Score = 44.0 bits (99), Expect = 6e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +1
Query: 547 VMAMKGEGTPEQEARCRIWMVDSKGLIVKNR 639
VMA++ EG P+++A +IW+VDSKGLIVK R
Sbjct: 314 VMALEKEGLPKEKAIKKIWLVDSKGLIVKGR 344
Score = 35.9 bits (79), Expect = 0.16
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 651 LNVHKERFAQDHAPVRTLAEVVEVARPSVLIGAAAI 758
L KE+FA +H ++ L +V+ +P+ LIG AAI
Sbjct: 347 LTQEKEKFAHEHEEMKNLEAIVQEIKPTALIGVAAI 382
>X79440-1|CAA55956.1| 604|Homo sapiens malate dehydrogenase
(oxaloacetate decarboxylating) (NADP+) protein.
Length = 604
Score = 132 bits (320), Expect = 1e-30
Identities = 56/84 (66%), Positives = 70/84 (83%)
Frame = +3
Query: 3 HVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPI 182
H+ +L +WPE +++A+VVTDGERILGLGDLG GMGIPVGKLALYTA GG+ P QCLP+
Sbjct: 167 HLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPV 226
Query: 183 TIDVGTNTQSMLDDPLYIGLRQRR 254
+DVGTN + +L DPLYIGL+ +R
Sbjct: 227 LLDVGTNNEELLRDPLYIGLKHQR 250
Score = 110 bits (265), Expect = 5e-24
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = +2
Query: 254 LRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQXXXX 433
+ G YD+LLDEFM+AV ++G NCL+QFEDF NANAFRLL KYRNKYC FNDDIQ
Sbjct: 251 VHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTAS 310
Query: 434 XXXXXXXXSLRLTQKRLSDNVIVFQ 508
+LR+T +LS++V VFQ
Sbjct: 311 VAVAGILAALRITNNKLSNHVFVFQ 335
Score = 46.8 bits (106), Expect = 8e-05
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1
Query: 547 VMAMKGEGTPEQEARCRIWMVDSKGLIVKNR 639
VMA++ EG P+ EA +IWMVDSKGLIVK R
Sbjct: 349 VMALEKEGVPKAEATRKIWMVDSKGLIVKGR 379
Score = 44.0 bits (99), Expect = 6e-04
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3
Query: 651 LNVHKERFAQDHAPVRTLAEVVEVARPSVLIGAAAI 758
LN KE FAQDH V +L EVV + +P+ +IG AAI
Sbjct: 382 LNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAI 417
>BC022472-1|AAH22472.1| 604|Homo sapiens malic enzyme 3,
NADP(+)-dependent, mitochondrial protein.
Length = 604
Score = 132 bits (320), Expect = 1e-30
Identities = 56/84 (66%), Positives = 70/84 (83%)
Frame = +3
Query: 3 HVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPI 182
H+ +L +WPE +++A+VVTDGERILGLGDLG GMGIPVGKLALYTA GG+ P QCLP+
Sbjct: 167 HLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPV 226
Query: 183 TIDVGTNTQSMLDDPLYIGLRQRR 254
+DVGTN + +L DPLYIGL+ +R
Sbjct: 227 LLDVGTNNEELLRDPLYIGLKHQR 250
Score = 110 bits (265), Expect = 5e-24
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = +2
Query: 254 LRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQXXXX 433
+ G YD+LLDEFM+AV ++G NCL+QFEDF NANAFRLL KYRNKYC FNDDIQ
Sbjct: 251 VHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTAS 310
Query: 434 XXXXXXXXSLRLTQKRLSDNVIVFQ 508
+LR+T +LS++V VFQ
Sbjct: 311 VAVAGILAALRITNNKLSNHVFVFQ 335
Score = 46.8 bits (106), Expect = 8e-05
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1
Query: 547 VMAMKGEGTPEQEARCRIWMVDSKGLIVKNR 639
VMA++ EG P+ EA +IWMVDSKGLIVK R
Sbjct: 349 VMALEKEGVPKAEATRKIWMVDSKGLIVKGR 379
Score = 44.0 bits (99), Expect = 6e-04
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3
Query: 651 LNVHKERFAQDHAPVRTLAEVVEVARPSVLIGAAAI 758
LN KE FAQDH V +L EVV + +P+ +IG AAI
Sbjct: 382 LNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAI 417
>AY424278-1|AAR04784.1| 259|Homo sapiens mitochondrial
NADP(+)-dependent malic enzyme 3 protein.
Length = 259
Score = 132 bits (320), Expect = 1e-30
Identities = 56/84 (66%), Positives = 70/84 (83%)
Frame = +3
Query: 3 HVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPI 182
H+ +L +WPE +++A+VVTDGERILGLGDLG GMGIPVGKLALYTA GG+ P QCLP+
Sbjct: 105 HLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPV 164
Query: 183 TIDVGTNTQSMLDDPLYIGLRQRR 254
+DVGTN + +L DPLYIGL+ +R
Sbjct: 165 LLDVGTNNEELLRDPLYIGLKHQR 188
Score = 96.3 bits (229), Expect = 1e-19
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +2
Query: 254 LRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQ 421
+ G YD+LLDEFM+AV ++G NCL+QFEDF NANAFRLL KYRNKYC FNDDIQ
Sbjct: 189 VHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQ 244
>AK092181-1|BAC03822.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ34862 fis, clone NT2NE2013547, highly similar to
NADP-DEPENDENT MALIC ENZYME, MITOCHONDRIAL PRECURSOR (EC
1.1.1.40). ).
Length = 252
Score = 132 bits (320), Expect = 1e-30
Identities = 56/84 (66%), Positives = 70/84 (83%)
Frame = +3
Query: 3 HVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPI 182
H+ +L +WPE +++A+VVTDGERILGLGDLG GMGIPVGKLALYTA GG+ P QCLP+
Sbjct: 105 HLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPV 164
Query: 183 TIDVGTNTQSMLDDPLYIGLRQRR 254
+DVGTN + +L DPLYIGL+ +R
Sbjct: 165 LLDVGTNNEELLRDPLYIGLKHQR 188
Score = 96.3 bits (229), Expect = 1e-19
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +2
Query: 254 LRGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQ 421
+ G YD+LLDEFM+AV ++G NCL+QFEDF NANAFRLL KYRNKYC FNDDIQ
Sbjct: 189 VHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQ 244
>M55905-1|AAA36197.1| 584|Homo sapiens mitochondrial NAD(P)+
-dependent malic enzyme protein.
Length = 584
Score = 126 bits (304), Expect = 9e-29
Identities = 55/84 (65%), Positives = 67/84 (79%)
Frame = +3
Query: 3 HVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPI 182
HV ++ NWPE V+A+VVTDGERILGLGDLG GMGIPVGKL LYTA GI+P +CLP+
Sbjct: 142 HVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPDRCLPV 201
Query: 183 TIDVGTNTQSMLDDPLYIGLRQRR 254
IDVGT+ ++L DP Y+GL Q+R
Sbjct: 202 CIDVGTDNIALLKDPFYMGLYQKR 225
Score = 97.5 bits (232), Expect = 5e-20
Identities = 43/83 (51%), Positives = 56/83 (67%)
Frame = +2
Query: 257 RGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQXXXXX 436
R YD+L+DEFM+A+ RYG+N L+QFEDFGN NAFR L KYR KYCTFNDDIQ
Sbjct: 227 RTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAV 286
Query: 437 XXXXXXXSLRLTQKRLSDNVIVF 505
+ ++ K +S++ I+F
Sbjct: 287 ALAGLLAAQKVISKPISEHKILF 309
Score = 37.5 bits (83), Expect = 0.052
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 547 VMAMKGEGTPEQEARCRIWMVDSKGLIVKNR 639
VM+M G EQEA+ +IWM D GL+VK R
Sbjct: 324 VMSMVENGLSEQEAQKKIWMFDKYGLLVKGR 354
>BC000147-1|AAH00147.1| 479|Homo sapiens ME2 protein protein.
Length = 479
Score = 126 bits (304), Expect = 9e-29
Identities = 55/84 (65%), Positives = 67/84 (79%)
Frame = +3
Query: 3 HVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPI 182
HV ++ NWPE V+A+VVTDGERILGLGDLG GMGIPVGKL LYTA GI+P +CLP+
Sbjct: 142 HVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPDRCLPV 201
Query: 183 TIDVGTNTQSMLDDPLYIGLRQRR 254
IDVGT+ ++L DP Y+GL Q+R
Sbjct: 202 CIDVGTDNIALLKDPFYMGLYQKR 225
Score = 97.5 bits (232), Expect = 5e-20
Identities = 43/83 (51%), Positives = 56/83 (67%)
Frame = +2
Query: 257 RGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGNANAFRLLEKYRNKYCTFNDDIQXXXXX 436
R YD+L+DEFM+A+ RYG+N L+QFEDFGN NAFR L KYR KYCTFNDDIQ
Sbjct: 227 RTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAV 286
Query: 437 XXXXXXXSLRLTQKRLSDNVIVF 505
+ ++ K +S++ I+F
Sbjct: 287 ALAGLLAAQKVISKPISEHKILF 309
Score = 37.5 bits (83), Expect = 0.052
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 547 VMAMKGEGTPEQEARCRIWMVDSKGLIVKNR 639
VM+M G EQEA+ +IWM D GL+VK R
Sbjct: 324 VMSMVENGLSEQEAQKKIWMFDKYGLLVKGR 354
>BC017403-1|AAH17403.1| 233|Homo sapiens Unknown (protein for
IMAGE:4290619) protein.
Length = 233
Score = 35.9 bits (79), Expect = 0.16
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 651 LNVHKERFAQDHAPVRTLAEVVEVARPSVLIGAAAI 758
L KE+FA +H ++ L +V+ +P+ LIG AAI
Sbjct: 8 LTQEKEKFAHEHEEMKNLEAIVQEIKPTALIGVAAI 43
>Y10931-1|CAA71861.1| 1142|Homo sapiens symplekin protein.
Length = 1142
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 600 LDGGLEGPHRQEQTGGGLNVHKERFAQDHAPV 695
LD LEGP +E GGL + +ER Q APV
Sbjct: 1087 LDSSLEGPLPKETAAGGLTLKEERSPQTLAPV 1118
>U49240-1|AAC50667.1| 1142|Homo sapiens symplekin protein.
Length = 1142
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 600 LDGGLEGPHRQEQTGGGLNVHKERFAQDHAPV 695
LD LEGP +E GGL + +ER Q APV
Sbjct: 1087 LDSSLEGPLPKETAAGGLTLKEERSPQTLAPV 1118
>BC006567-1|AAH06567.1| 1142|Homo sapiens SYMPK protein protein.
Length = 1142
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 600 LDGGLEGPHRQEQTGGGLNVHKERFAQDHAPV 695
LD LEGP +E GGL + +ER Q APV
Sbjct: 1087 LDSSLEGPLPKETAAGGLTLKEERSPQTLAPV 1118
>BC006536-1|AAH06536.1| 1142|Homo sapiens SYMPK protein protein.
Length = 1142
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 600 LDGGLEGPHRQEQTGGGLNVHKERFAQDHAPV 695
LD LEGP +E GGL + +ER Q APV
Sbjct: 1087 LDSSLEGPLPKETAAGGLTLKEERSPQTLAPV 1118
>AF057699-1|AAQ13438.1| 520|Homo sapiens EIF-2B-delta-like protein
protein.
Length = 520
Score = 32.3 bits (70), Expect = 2.0
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +2
Query: 89 RFGRVRDGHPCGQTRALHRARRH--QASSVSTHHYRRGYEH--PVDAGRPAVHRAPAAAL 256
+ G R+ P G+++A RA R Q + + R+G + P A P+
Sbjct: 80 QLGTPREKVPAGRSKAELRAERRAKQEAERALKQARKGEQGGPPPKASPSTAEETPSGVK 139
Query: 257 RGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGN-ANAFRLLEKY 385
R P+Y ++ D +R +V++ + + +D+G+ + F L +Y
Sbjct: 140 RLPEYPQVDDLLLRRLVKKPERQQVPTRKDYGSKVSLFSHLPQY 183
>BC091502-1|AAH91502.1| 523|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 4 delta, 67kDa protein.
Length = 523
Score = 31.5 bits (68), Expect = 3.4
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +2
Query: 89 RFGRVRDGHPCGQTRALHRARRH--QASSVSTHHYRRGYEH--PVDAGRPAVHRAPAAAL 256
+ G R+ P G+++A RA R Q + + R+G + P A P+
Sbjct: 83 QLGTPREKVPAGRSKAELRAERRAKQEAERALKQARKGEQGGPPPKASPSTAGETPSGVK 142
Query: 257 RGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGN-ANAFRLLEKY 385
R P+Y ++ D +R +V++ + + +D+G+ + F L +Y
Sbjct: 143 RLPEYPQVDDLLLRRLVKKPERQQVPTRKDYGSKVSLFSHLPQY 186
>BC001870-1|AAH01870.1| 523|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 4 delta, 67kDa protein.
Length = 523
Score = 31.5 bits (68), Expect = 3.4
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +2
Query: 89 RFGRVRDGHPCGQTRALHRARRH--QASSVSTHHYRRGYEH--PVDAGRPAVHRAPAAAL 256
+ G R+ P G+++A RA R Q + + R+G + P A P+
Sbjct: 83 QLGTPREKVPAGRSKAELRAERRAKQEAERALKQARKGEQGGPPPKASPSTAGETPSGVK 142
Query: 257 RGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGN-ANAFRLLEKY 385
R P+Y ++ D +R +V++ + + +D+G+ + F L +Y
Sbjct: 143 RLPEYPQVDDLLLRRLVKKPERQQVPTRKDYGSKVSLFSHLPQY 186
>AJ011307-2|CAB57305.1| 542|Homo sapiens guanine nucleotide
exchange factor protein.
Length = 542
Score = 31.5 bits (68), Expect = 3.4
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +2
Query: 89 RFGRVRDGHPCGQTRALHRARRH--QASSVSTHHYRRGYEH--PVDAGRPAVHRAPAAAL 256
+ G R+ P G+++A RA R Q + + R+G + P A P+
Sbjct: 102 QLGTPREKVPAGRSKAELRAERRAKQEAERALKQARKGEQGGPPPKASPSTAGETPSGVK 161
Query: 257 RGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGN-ANAFRLLEKY 385
R P+Y ++ D +R +V++ + + +D+G+ + F L +Y
Sbjct: 162 RLPEYPQVDDLLLRRLVKKPERQQVPTRKDYGSKVSLFSHLPQY 205
>AJ011307-1|CAB57304.1| 522|Homo sapiens guanine nucleotide
exchange factor protein.
Length = 522
Score = 31.5 bits (68), Expect = 3.4
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +2
Query: 89 RFGRVRDGHPCGQTRALHRARRH--QASSVSTHHYRRGYEH--PVDAGRPAVHRAPAAAL 256
+ G R+ P G+++A RA R Q + + R+G + P A P+
Sbjct: 82 QLGTPREKVPAGRSKAELRAERRAKQEAERALKQARKGEQGGPPPKASPSTAGETPSGVK 141
Query: 257 RGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGN-ANAFRLLEKY 385
R P+Y ++ D +R +V++ + + +D+G+ + F L +Y
Sbjct: 142 RLPEYPQVDDLLLRRLVKKPERQQVPTRKDYGSKVSLFSHLPQY 185
>AJ011306-1|CAB57261.1| 543|Homo sapiens guanine nucleotide
exchange factor (long isoform) protein.
Length = 543
Score = 31.5 bits (68), Expect = 3.4
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +2
Query: 89 RFGRVRDGHPCGQTRALHRARRH--QASSVSTHHYRRGYEH--PVDAGRPAVHRAPAAAL 256
+ G R+ P G+++A RA R Q + + R+G + P A P+
Sbjct: 103 QLGTPREKVPAGRSKAELRAERRAKQEAERALKQARKGEQGGPPPKASPSTAGETPSGVK 162
Query: 257 RGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGN-ANAFRLLEKY 385
R P+Y ++ D +R +V++ + + +D+G+ + F L +Y
Sbjct: 163 RLPEYPQVDDLLLRRLVKKPERQQVPTRKDYGSKVSLFSHLPQY 206
>AJ011305-1|CAB57260.1| 522|Homo sapiens guanine nucleotide
exchange factor, delta subunit protein.
Length = 522
Score = 31.5 bits (68), Expect = 3.4
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +2
Query: 89 RFGRVRDGHPCGQTRALHRARRH--QASSVSTHHYRRGYEH--PVDAGRPAVHRAPAAAL 256
+ G R+ P G+++A RA R Q + + R+G + P A P+
Sbjct: 82 QLGTPREKVPAGRSKAELRAERRAKQEAERALKQARKGEQGGPPPKASPSTAGETPSGVK 141
Query: 257 RGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGN-ANAFRLLEKY 385
R P+Y ++ D +R +V++ + + +D+G+ + F L +Y
Sbjct: 142 RLPEYPQVDDLLLRRLVKKPERQQVPTRKDYGSKVSLFSHLPQY 185
>AF218009-1|AAG17251.1| 229|Homo sapiens unknown protein.
Length = 229
Score = 31.5 bits (68), Expect = 3.4
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +2
Query: 89 RFGRVRDGHPCGQTRALHRARRH--QASSVSTHHYRRGYEH--PVDAGRPAVHRAPAAAL 256
+ G R+ P G+++A RA R Q + + R+G + P A P+
Sbjct: 68 QLGTPREKVPAGRSKAELRAERRAKQEAERALKQARKGEQGGPPPKASPSTAGETPSGVK 127
Query: 257 RGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGN-ANAFRLLEKY 385
R P+Y ++ D +R +V++ + + +D+G+ + F L +Y
Sbjct: 128 RLPEYPQVDDLLLRRLVKKPERQQVPTRKDYGSKVSLFSHLPQY 171
>AF112207-1|AAF17195.1| 523|Homo sapiens translation initiation
factor eIF-2b delta subunit protein.
Length = 523
Score = 31.5 bits (68), Expect = 3.4
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +2
Query: 89 RFGRVRDGHPCGQTRALHRARRH--QASSVSTHHYRRGYEH--PVDAGRPAVHRAPAAAL 256
+ G R+ P G+++A RA R Q + + R+G + P A P+
Sbjct: 83 QLGTPREKVPAGRSKAELRAERRAKQEAERALKQARKGEQGGPPPKASPSTAGETPSGVK 142
Query: 257 RGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGN-ANAFRLLEKY 385
R P+Y ++ D +R +V++ + + +D+G+ + F L +Y
Sbjct: 143 RLPEYPQVDDLLLRRLVKKPERQQVPTRKDYGSKVSLFSHLPQY 186
>AC074117-8|AAY14843.1| 522|Homo sapiens unknown protein.
Length = 522
Score = 31.5 bits (68), Expect = 3.4
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +2
Query: 89 RFGRVRDGHPCGQTRALHRARRH--QASSVSTHHYRRGYEH--PVDAGRPAVHRAPAAAL 256
+ G R+ P G+++A RA R Q + + R+G + P A P+
Sbjct: 82 QLGTPREKVPAGRSKAELRAERRAKQEAERALKQARKGEQGGPPPKASPSTAGETPSGVK 141
Query: 257 RGPDYDELLDEFMRAVVRRYGQNCLVQFEDFGN-ANAFRLLEKY 385
R P+Y ++ D +R +V++ + + +D+G+ + F L +Y
Sbjct: 142 RLPEYPQVDDLLLRRLVKKPERQQVPTRKDYGSKVSLFSHLPQY 185
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,182,181
Number of Sequences: 237096
Number of extensions: 2126274
Number of successful extensions: 6152
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6150
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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