Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00270
(662 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 140 2e-32
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 140 2e-32
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 129 7e-29
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 122 6e-27
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 113 5e-24
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 111 2e-23
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 96 6e-19
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 95 1e-18
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 93 7e-18
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 89 7e-17
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 74 3e-12
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 70 6e-11
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 66 5e-10
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 65 1e-09
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 63 7e-09
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 62 2e-08
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 55 1e-06
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 52 9e-06
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 51 2e-05
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 51 3e-05
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 47 4e-04
UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2; Thermoprote... 42 0.010
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 42 0.010
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 42 0.018
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc... 41 0.031
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu... 39 0.093
UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1; Methano... 38 0.22
UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5; Methano... 37 0.50
UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.66
UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 36 0.66
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;... 36 1.1
UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: ... 33 6.1
UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina ... 33 6.1
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 8.1
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.1
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 140 bits (340), Expect = 2e-32
Identities = 63/74 (85%), Positives = 67/74 (90%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 212
GKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 213 TRIIDVVYNASNNE 254
TRIIDVVYNASNNE
Sbjct: 76 TRIIDVVYNASNNE 89
Score = 103 bits (247), Expect = 4e-21
Identities = 45/60 (75%), Positives = 53/60 (88%)
Frame = +2
Query: 254 MVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 433
+VRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 90 LVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 140 bits (340), Expect = 2e-32
Identities = 63/74 (85%), Positives = 67/74 (90%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 212
GKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 213 TRIIDVVYNASNNE 254
TRIIDVVYNASNNE
Sbjct: 76 TRIIDVVYNASNNE 89
Score = 129 bits (311), Expect = 7e-29
Identities = 58/85 (68%), Positives = 70/85 (82%)
Frame = +2
Query: 254 MVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 433
+VRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 90 LVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Query: 434 LARQRLAKVEGALEEQFHTGRLLAC 508
R++ AK+ LEEQF G+LLAC
Sbjct: 150 DERKKNAKISSLLEEQFQQGKLLAC 174
Score = 69.3 bits (162), Expect = 8e-11
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 609
G +ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 129 bits (311), Expect = 7e-29
Identities = 58/85 (68%), Positives = 70/85 (82%)
Frame = +2
Query: 254 MVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 433
+VRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 70 LVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 129
Query: 434 LARQRLAKVEGALEEQFHTGRLLAC 508
R++ AK+ LEEQF G+LLAC
Sbjct: 130 DERKKNAKISSLLEEQFQQGKLLAC 154
Score = 80.6 bits (190), Expect = 3e-14
Identities = 46/74 (62%), Positives = 50/74 (67%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 212
GKR P KKRKYELGRPAANT++GP+RIH+VR RGG C TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG-------------------C-TRK 55
Query: 213 TRIIDVVYNASNNE 254
TRIIDVVYNASNNE
Sbjct: 56 TRIIDVVYNASNNE 69
Score = 69.3 bits (162), Expect = 8e-11
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 609
G +ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 149 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 122 bits (295), Expect = 6e-27
Identities = 56/74 (75%), Positives = 63/74 (85%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 212
GKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+TGNF+W SE RK
Sbjct: 16 GKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARK 75
Query: 213 TRIIDVVYNASNNE 254
TRI DVVYNASNNE
Sbjct: 76 TRIADVVYNASNNE 89
Score = 121 bits (291), Expect = 2e-26
Identities = 55/87 (63%), Positives = 70/87 (80%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 MVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTAR 427
+VRTKTLVKN+IVV+DATPFRQWYE+HY LPLGRK+ K + E+ ++ KKRS+K +
Sbjct: 90 LVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMK 149
Query: 428 KYLARQRLAKVEGALEEQFHTGRLLAC 508
KYL RQ+ KVE ALE+QF +GR+LAC
Sbjct: 150 KYLERQKYGKVEQALEDQFTSGRILAC 176
Score = 66.5 bits (155), Expect = 5e-10
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSKR 603
G ++SRPGQCGR+DGYILEGKELEFYL+KIKSK+
Sbjct: 171 GRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 113 bits (271), Expect = 5e-24
Identities = 51/75 (68%), Positives = 64/75 (85%), Gaps = 1/75 (1%)
Frame = +3
Query: 33 GKRAPI-RKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 209
G R P+ +KKRKYELGRP++NT+LG + + VR RGGN K+RALRLD+GNFSWGS+ TR
Sbjct: 15 GGRYPVHKKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTR 74
Query: 210 KTRIIDVVYNASNNE 254
KTR++DVVYNAS+NE
Sbjct: 75 KTRVMDVVYNASSNE 89
Score = 58.4 bits (135), Expect = 1e-07
Identities = 40/85 (47%), Positives = 50/85 (58%)
Frame = +2
Query: 254 MVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 433
+VRTKTLVKNAIV VD TPF+ W+++HY L LG K +E +A S+K A
Sbjct: 90 LVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELG-----KSSEDPQA------SEKVA--- 135
Query: 434 LARQRLAKVEGALEEQFHTGRLLAC 508
A V L +QF +GRLLAC
Sbjct: 136 ------ALVPRTLLDQFSSGRLLAC 154
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSKR 603
G ++SRPGQCGR DGY+LEG+EL FY R++ K+
Sbjct: 149 GRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDKKK 186
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 111 bits (266), Expect = 2e-23
Identities = 53/75 (70%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 209
GK+ RKKRKYELGR ANT+L + + VR RGGN K+RALRLDTGN+SWGSE TR
Sbjct: 16 GKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTR 75
Query: 210 KTRIIDVVYNASNNE 254
KTRI+DVVYNASNNE
Sbjct: 76 KTRILDVVYNASNNE 90
Score = 77.8 bits (183), Expect = 2e-13
Identities = 43/93 (46%), Positives = 57/93 (61%), Gaps = 8/93 (8%)
Frame = +2
Query: 254 MVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKK--------GAKLTEAEEAIINKKR 409
+VRT+TLVK+AIV VDA PF+QWY +HY + +GRKK A+ E E A K+
Sbjct: 91 LVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAAEETKK 150
Query: 410 SQKTARKYLARQRLAKVEGALEEQFHTGRLLAC 508
S RK R+ ++ +EEQF +GRLLAC
Sbjct: 151 SNHVTRKLEKRKEGRTLDPHIEEQFGSGRLLAC 183
Score = 64.5 bits (150), Expect = 2e-09
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 609
G ++SRPGQCGRADGYILEGKELEFY++K++ K+ K
Sbjct: 178 GRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 96.3 bits (229), Expect = 6e-19
Identities = 45/74 (60%), Positives = 55/74 (74%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 212
GK RK+ K ELGR ANTRLG +R+ VR+RGGN K RALRLDTGNF+W SE +
Sbjct: 16 GKTKIHRKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRLDTGNFAWASEAIAHR 75
Query: 213 TRIIDVVYNASNNE 254
R++DVVYNA++NE
Sbjct: 76 VRLLDVVYNATSNE 89
Score = 65.7 bits (153), Expect = 9e-10
Identities = 42/97 (43%), Positives = 54/97 (55%), Gaps = 13/97 (13%)
Frame = +2
Query: 254 MVRTKTLVKNAIVVVDATPFRQWYESHYTLPL-GRKKGAKLTEAEE--------AIINK- 403
+VRTKTLVKN IV VDA PF++WY HY + L KK K A E A +K
Sbjct: 90 LVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAADKY 149
Query: 404 ---KRSQKTARKYLARQRLAKVEGALEEQFHTGRLLA 505
K S K R++ R+R +VE A+ +Q GR+LA
Sbjct: 150 DVNKASPKLQREWTRRRRNHRVEKAIADQLREGRVLA 186
Score = 49.6 bits (113), Expect = 7e-05
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSKR 603
G + SRPGQ GRADG +LEG EL+FYL++++ K+
Sbjct: 182 GRVLARITSRPGQSGRADGILLEGAELQFYLKRLEKKK 219
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 95.5 bits (227), Expect = 1e-18
Identities = 45/75 (60%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 209
G P+++++ YELGR ANT+L + + VR RGGNTK+RALR DT N+SWGSE TR
Sbjct: 113 GPFCPLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTR 172
Query: 210 KTRIIDVVYNASNNE 254
KTRI+DVVY A+NNE
Sbjct: 173 KTRILDVVYIATNNE 187
Score = 58.4 bits (135), Expect = 1e-07
Identities = 24/45 (53%), Positives = 35/45 (77%)
Frame = +2
Query: 254 MVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 388
+VRT+TLVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 188 LVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 92.7 bits (220), Expect = 7e-18
Identities = 42/65 (64%), Positives = 51/65 (78%)
Frame = +3
Query: 36 KRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKT 215
KR+ RKKR +E GR ANTR+GP+RIH VR+RGGN K+R LRL++GNFSWGSE RK
Sbjct: 17 KRSHYRKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRLESGNFSWGSEGIARKV 76
Query: 216 RIIDV 230
R+I V
Sbjct: 77 RVIVV 81
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIK 594
G +++SRPGQ GR DGYILEG+EL FY R I+
Sbjct: 106 GRLYAVVSSRPGQSGRVDGYILEGEELAFYQRAIR 140
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 89.4 bits (212), Expect = 7e-17
Identities = 41/75 (54%), Positives = 56/75 (74%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 212
GK+ ++KK+K +GR ANTRLG R+H VR R G K RALRL+ GNFSW S+ T+
Sbjct: 16 GKKNSMQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRLENGNFSWASQSITKG 75
Query: 213 TRIIDVVYNASNNEW 257
T+I++VVYNAS+N++
Sbjct: 76 TKILNVVYNASDNDF 90
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSKR 603
G ++SRPGQ G +GYILEGKEL+FY +KI K+
Sbjct: 199 GRVLACISSRPGQTGSVEGYILEGKELDFYSKKISDKK 236
Score = 38.7 bits (86), Expect = 0.12
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +2
Query: 257 VRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKK----RSQKTA 424
VRT TLVK AI+ +D PFR W+ Y + K E+ KK + ++
Sbjct: 91 VRTNTLVKGAIIEIDPAPFRLWFLKFYGKDIASTDYYKSLESATFKTEKKVVVPKEEENK 150
Query: 425 RKYLARQRLAKVEGAL 472
K +A Q++A+ + AL
Sbjct: 151 EKTIA-QQIAETQVAL 165
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 9/76 (11%)
Frame = +3
Query: 54 KKRKYELGRPAANTRL---------GPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECST 206
KKRKY LGR ANT+L Q+I ++R RGGN K RALRL G+F+WGS +
Sbjct: 23 KKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGGNIKRRALRLSHGSFAWGSADIS 82
Query: 207 RKTRIIDVVYNASNNE 254
K RI+ VVYN+++NE
Sbjct: 83 HKARILQVVYNSTSNE 98
Score = 46.0 bits (104), Expect = 8e-04
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +1
Query: 508 LASRPGQCGRADGYILEGKELEFYLRKIKSK 600
++SRPGQ G ADGYILEG EL FY +K+ K
Sbjct: 144 ISSRPGQVGTADGYILEGPELLFYQKKLAPK 174
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 69.7 bits (163), Expect = 6e-11
Identities = 30/34 (88%), Positives = 33/34 (97%)
Frame = +1
Query: 508 LASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 609
+ASRPGQCGRADGYILEGKELEFYLRKIK+K+ K
Sbjct: 116 IASRPGQCGRADGYILEGKELEFYLRKIKAKKGK 149
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 66.5 bits (155), Expect = 5e-10
Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Frame = +2
Query: 278 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 436
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 437 ARQRL--AKVEGALEEQFHTGRLLAC 508
RQ L A VE +L+E+F TGRLLAC
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLAC 86
Score = 57.6 bits (133), Expect = 2e-07
Identities = 23/40 (57%), Positives = 32/40 (80%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 609
G ++S+PGQ GRADGY+ EGKELEF+ +K+K+K+AK
Sbjct: 81 GRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKAK 120
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 33 GKRAPI-RKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 209
G +A I RKKR G ++T++G +++ VR RGGN KY+ALRLD G+F + + R
Sbjct: 15 GAKAVISRKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRLDMGHFKFITTGKFR 74
Query: 210 KTRIIDVVYNASNNE 254
+++ VVY+ S+NE
Sbjct: 75 MAKLLQVVYHPSSNE 89
Score = 41.5 bits (93), Expect = 0.018
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSK 600
G ++ SRPGQ G A G++L+G EL+FY K K
Sbjct: 131 GHLYAIITSRPGQVGMAQGHVLQGDELKFYADKFNKK 167
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 62.9 bits (146), Expect = 7e-09
Identities = 34/82 (41%), Positives = 47/82 (57%)
Frame = +3
Query: 24 PPDGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECS 203
P GK P KR+YELGR TRLG + + +RS GGN+K+ LR D N + +
Sbjct: 12 PSGGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKDKT 71
Query: 204 TRKTRIIDVVYNASNNEWCVQR 269
TRK +I V N+++ + VQR
Sbjct: 72 TRKVKINTVKENSADPHY-VQR 92
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/74 (43%), Positives = 46/74 (62%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 212
G ++ RKKR + GR +NT++G + + +R RGG K RAL L GNFS+ S T K
Sbjct: 16 GLKSCWRKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFLSYGNFSFVSIQRTFK 75
Query: 213 TRIIDVVYNASNNE 254
+I+ V +N S+NE
Sbjct: 76 AKILSVAFNESSNE 89
Score = 53.2 bits (122), Expect = 5e-06
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSK 600
G + SRPGQ GRADGYILEG+EL+++L+KI+ K
Sbjct: 142 GKILARICSRPGQSGRADGYILEGQELDYFLKKIQKK 178
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 55.2 bits (127), Expect = 1e-06
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 209
GK+ I KK+ + G NT L I R RGGN K++A+ L G+F W + ++
Sbjct: 9 GKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQWKTMQLSK 68
Query: 210 KTRIIDVVYNASNNEWCVQRPLSR 281
++I+ V+YN +N + +R LS+
Sbjct: 69 NSKILSVLYNQANLKLVQKRNLSK 92
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 52.4 bits (120), Expect = 9e-06
Identities = 29/86 (33%), Positives = 49/86 (56%)
Frame = +3
Query: 24 PPDGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECS 203
P G+ + K++ E+GR A T +G +R VR+ GGN K RALRL+ S +
Sbjct: 11 PSGGRYHTSQGKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPATGE 70
Query: 204 TRKTRIIDVVYNASNNEWCVQRPLSR 281
T+KT+I V N+++ + ++ L++
Sbjct: 71 TKKTKIEAVEANSADPNYVRRKLLTK 96
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +3
Query: 51 RKKRKYELGRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIID 227
RKKR++ELGR T+LG + V R+ GGNTK +T N SE +K +II
Sbjct: 21 RKKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDASEKKIKKAKIIT 80
Query: 228 VVYNASNNEWCVQR 269
V N +N+ + VQR
Sbjct: 81 VKANPANSHY-VQR 93
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 50.8 bits (116), Expect = 3e-05
Identities = 34/84 (40%), Positives = 48/84 (57%)
Frame = +2
Query: 254 MVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 433
+VRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 32 LVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRKL 79
Query: 434 LARQRLAKVEGALEEQFHTGRLLA 505
RQ+ K++ +EEQF +GRLLA
Sbjct: 80 EKRQQDHKLDPHIEEQFGSGRLLA 103
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 47.2 bits (107), Expect = 4e-04
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 24 PPDGKRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGSEC 200
P G+ RKKRK ELGR +NTR+ Q + +R+ GGN K R N +
Sbjct: 12 PSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANV-FDKSG 70
Query: 201 STRKTRIIDVVYNASNNEW 257
RK RII V+ N +N ++
Sbjct: 71 KGRKVRIIRVLENPANRQF 89
>UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2;
Thermoprotei|Rep: Ribosomal protein S8E - Cenarchaeum
symbiosum
Length = 129
Score = 42.3 bits (95), Expect = 0.010
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 212
G+R P+R +RKYE+ R G Q + + RG TK +D N + +K
Sbjct: 16 GRRHPLRTRRKYEIDRYPNEALSGAQETVTRKVRGKRTKTALKTIDFVNLA-VQGAKVKK 74
Query: 213 TRIIDVVYNASNNEW 257
++I+ V+ N +NN++
Sbjct: 75 SKIVKVLENPTNNDY 89
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 42.3 bits (95), Expect = 0.010
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +3
Query: 24 PPDGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDT-GNFSWGSE 197
P G+ P RKKRK+E+G P T +G +R + R GGN K + L+ T N +
Sbjct: 12 PTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVK-KGLKFATHANVADPET 70
Query: 198 CSTRKTRIIDVVYNASN 248
+ RI +VV N ++
Sbjct: 71 GEVKCVRIEEVVKNPAS 87
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 41.5 bits (93), Expect = 0.018
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQRIH-SVRSRGGNTKYRALRLDTGNFSWGSECSTR 209
G + R KRKYE+G P T L + I R+ GGN K R T N + + +
Sbjct: 15 GLKGKHRDKRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTANVLDPATNTAK 74
Query: 210 KTRIIDVVYNASNNE 254
K +I++++ +N E
Sbjct: 75 KVKILEILETPANKE 89
>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Uncultured methanogenic archaeon RC-I
Length = 125
Score = 40.7 bits (91), Expect = 0.031
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +3
Query: 51 RKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 230
R KRK+ELGR +G Q++ + G +K R L+ D N + T+K ++ V
Sbjct: 20 RSKRKFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSDVVNVTDPKTGKTQKVKMTTV 79
Query: 231 VYNASNNEW 257
N +N +
Sbjct: 80 TENPANKNY 88
>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
Desulfurococcales|Rep: 30S ribosomal protein S8e -
Aeropyrum pernix
Length = 136
Score = 39.1 bits (87), Expect = 0.093
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +3
Query: 24 PPDGKRAPIRK-KRKYELGRPAANTRLG---PQRIHSVRSRGGNTKYRALRLDTGNFSWG 191
P GKR K KRKY GRP T L + VR+RGG+ K +A ++ S
Sbjct: 12 PSGGKRRYYYKVKRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKIKAKKVAFAVVSNP 71
Query: 192 SECSTRKTRIIDVVYNASNNEW 257
RK RI+ +V ++ E+
Sbjct: 72 KTGEARKARILRIVETPAHREY 93
>UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 30S ribosomal
protein S8e - Methanosphaera stadtmanae (strain DSM
3091)
Length = 126
Score = 37.9 bits (84), Expect = 0.22
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 9 GISEGPPDGKRAPIRK-KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFS 185
G S P G R+ K KR E GR A TR+G + + +RG TK RA N
Sbjct: 6 GSSLRKPSGARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRATVAKRINVI 65
Query: 186 WGSECSTRKTRIIDVVYNASNNEW 257
+ S++ ++ V+ N +N+ +
Sbjct: 66 DPKDNSSKNVEMLTVLENGANSHF 89
>UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5;
Methanococcus|Rep: 30S ribosomal protein S8e -
Methanococcus maripaludis
Length = 128
Score = 36.7 bits (81), Expect = 0.50
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 54 KKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 230
KK K E+GRPAA T++ + + VR RG N K + + + N + +K + +V
Sbjct: 22 KKHKREMGRPAAETQVSDKIKRKIVRCRGANLKVKLEKTNYANVFDQANKVCKKVVVTNV 81
Query: 231 VYNASNNEW 257
+ N +N +
Sbjct: 82 IDNKANKHY 90
>UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 622
Score = 36.3 bits (80), Expect = 0.66
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -2
Query: 277 DKGLCTHHSLLDALYTTSMIRVLRVEHSDPQEKLPVS 167
D GL ++ L D +Y T I +R EH DP++ LP S
Sbjct: 302 DLGLADYNLLFDTIYATPPIARVRSEHEDPRDNLPDS 338
>UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrobaculum
aerophilum
Length = 131
Score = 36.3 bits (80), Expect = 0.66
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +3
Query: 24 PPDGKRAPIRKKRKYEL-GRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWGSE 197
P GK+ +RK +K L G P +LG V R RGGN K R N E
Sbjct: 15 PSGGKKRKVRKTKKKALGGGPPQIPKLGENDTRIVERVRGGNLKVRLREAKFANVYIPKE 74
Query: 198 CSTRKTRIIDVVYNASNNEW 257
+ K +II ++ +N ++
Sbjct: 75 RKSVKAKIISIISTPANPDF 94
>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 374 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACW 511
T EE I+NKK S+K +KY ++ AK+ L E F L W
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHFCQASSLPTW 150
>UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: TPR
repeat - Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264)
Length = 556
Score = 33.1 bits (72), Expect = 6.1
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 36 KRAPIRKKRKYELGRPAANTRLGPQRIHSVRSR 134
+RAP K YE R AA TRL P + ++R R
Sbjct: 272 ERAPANLKANYEKERDAAGTRLSPAELEALRGR 304
>UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 90
Score = 33.1 bits (72), Expect = 6.1
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 323 YESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA-RKYLARQRLAKVEGALEE 478
Y + +TL R + A EA E ++ K +K A K LA+ L K+EG LEE
Sbjct: 31 YRNIWTLNGSRNRSATSKEACEKLLAKNCLRKIACEKLLAKNCLRKIEGLLEE 83
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 8.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 287 IVVVDATPFRQWYESHYTLPLGRKK 361
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 8.1
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 302 ATPFRQWYESHYTLPLGRKKGAKLTEAE 385
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,505,501
Number of Sequences: 1657284
Number of extensions: 12076325
Number of successful extensions: 34844
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 33593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34821
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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