Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00270
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    26   0.32 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    25   0.55 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    25   0.73 
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    24   0.97 
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    24   0.97 
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    24   1.3  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    24   1.3  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   2.2  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   3.0  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   3.9  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   5.2  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   5.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   5.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.2  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   6.8  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   6.8  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   9.0  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   9.0  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   9.0  

>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 295 YNNCILDKGLCT 260
           Y NC+LDKG CT
Sbjct: 41  YVNCLLDKGRCT 52


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 295 YNNCILDKGLCT 260
           Y NCI+D+G CT
Sbjct: 41  YFNCIMDRGACT 52


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +1

Query: 25  HRMGNVRPYARRGSMS*GVPLQTPG 99
           H      PY   G    G+PLQ PG
Sbjct: 171 HHYARYHPYPNFGVPPAGIPLQNPG 195


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 295 YNNCILDKGLCT 260
           Y +C+LDKG CT
Sbjct: 41  YLDCVLDKGKCT 52


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 295 YNNCILDKGLCT 260
           Y NC+L+KG CT
Sbjct: 46  YVNCLLEKGKCT 57


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 6/29 (20%)
 Frame = -2

Query: 295 YNNCILDKGLCT------HHSLLDALYTT 227
           Y NC+LD+G C+       ++L DAL T+
Sbjct: 44  YVNCLLDRGKCSPDGQELKNNLADALQTS 72


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 6/29 (20%)
 Frame = -2

Query: 295 YNNCILDKGLCT------HHSLLDALYTT 227
           Y NC+LD+G C+       ++L DAL T+
Sbjct: 44  YVNCLLDRGKCSPDGQELKNNLADALQTS 72


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 295 YNNCILDKGLCT 260
           Y +CIL+KG CT
Sbjct: 42  YLDCILEKGKCT 53


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +3

Query: 45  PIRKKRKYELGRPAANTRLGPQRIH 119
           P+R   ++    PA N   GP   H
Sbjct: 36  PLRTSYQHHFNSPAGNAHTGPTGTH 60


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 295 YNNCILDKGLCT 260
           Y NC+L+KG C+
Sbjct: 56  YINCLLEKGPCS 67


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 295 YNNCILDKGLCT 260
           Y +CIL KG CT
Sbjct: 43  YIDCILGKGKCT 54


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
 Frame = -2

Query: 352 PKRQRIMRLIPLPEWS--CIYYNNCILDKGLCTHHSLLDALYTTSM 221
           P    I+  + +  W   C +YN  + D    T   LL A+Y+  +
Sbjct: 227 PSPATIISNVTVISWQAVCTFYNILLCDSVAHTAGELLGAVYSLDL 272


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
 Frame = -2

Query: 352 PKRQRIMRLIPLPEWS--CIYYNNCILDKGLCTHHSLLDALYTTSM 221
           P    I+  + +  W   C +YN  + D    T   LL A+Y+  +
Sbjct: 227 PSPATIISNVTVISWQAVCTFYNILLCDSVAHTAGELLGAVYSLDL 272


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
 Frame = -2

Query: 352 PKRQRIMRLIPLPEWS--CIYYNNCILDKGLCTHHSLLDALYTTSM 221
           P    I+  + +  W   C +YN  + D    T   LL A+Y+  +
Sbjct: 547 PSPATIISNVTVISWQAVCTFYNILLCDSVAHTAGELLGAVYSLDL 592


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 295 YNNCILDKGLCT 260
           Y +C+L KG CT
Sbjct: 43  YLDCVLGKGKCT 54


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 295 YNNCILDKGLCT 260
           Y +C+L KG CT
Sbjct: 43  YLDCVLGKGKCT 54


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -2

Query: 295 YNNCILDKGLCT 260
           Y NC++++G C+
Sbjct: 46  YFNCLMERGTCS 57


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 298 YYNNCILDKGLC 263
           YY  C+L KG C
Sbjct: 42  YYAACLLSKGPC 53


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 295 YNNCILDKGLCTHHSL 248
           Y +C+L+KG C+   L
Sbjct: 48  YVDCLLEKGRCSPDGL 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,482
Number of Sequences: 336
Number of extensions: 3009
Number of successful extensions: 21
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)