Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00270
         (662 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...   118   2e-28
AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical prote...    23   8.6  
AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosens...    23   8.6  
AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosens...    23   8.6  

>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score =  118 bits (284), Expect = 2e-28
 Identities = 52/85 (61%), Positives = 71/85 (83%)
 Frame = +2

Query: 254 MVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 433
           ++RTKTLVKNAI+V+DA+PFRQWYESHY LPLG+K+  +L   EE +++KKR++   RKY
Sbjct: 19  LIRTKTLVKNAIIVIDASPFRQWYESHYLLPLGKKR--ELKAGEEDVLSKKRTKSNLRKY 76

Query: 434 LARQRLAKVEGALEEQFHTGRLLAC 508
           + RQ+ AK++ A+EEQF+ GRLLAC
Sbjct: 77  VKRQKNAKIDPAVEEQFNAGRLLAC 101



 Score = 64.9 bits (151), Expect = 2e-12
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = +1

Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 609
           G     ++SRPGQ GRADGYILEGKELEFYL+KIK+K++K
Sbjct: 96  GRLLACISSRPGQVGRADGYILEGKELEFYLKKIKNKKSK 135



 Score = 34.3 bits (75), Expect = 0.003
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +3

Query: 207 RKTRIIDVVYNASNNE 254
           RK RIIDVVYNASNNE
Sbjct: 3   RKARIIDVVYNASNNE 18


>AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 295 YNNCILDKGLCT 260
           Y  C+LDKG CT
Sbjct: 44  YLKCLLDKGPCT 55


>AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosensory
           protein CSP2 protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 295 YNNCILDKGLCT 260
           Y  C+LDKG CT
Sbjct: 44  YLKCLLDKGPCT 55


>AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosensory
           protein CSP1 protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 295 YNNCILDKGLCT 260
           Y  C+LDKG CT
Sbjct: 44  YLKCLLDKGPCT 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,810
Number of Sequences: 2352
Number of extensions: 12881
Number of successful extensions: 38
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)