Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00270
(662 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 140 3e-33
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 140 3e-33
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 140 3e-33
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 140 3e-33
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 129 1e-29
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 69 1e-11
AJ250854-1|CAC03757.1| 215|Homo sapiens cAMP-specific phosphodi... 29 2.4
BC013902-1|AAH13902.1| 486|Homo sapiens FAD-dependent oxidoredu... 31 3.7
AF103801-1|AAF02421.1| 486|Homo sapiens unknown protein. 31 3.7
BT007398-1|AAP36062.1| 219|Homo sapiens phosphodiesterase 4D, c... 29 4.0
BC008390-1|AAH08390.1| 219|Homo sapiens PDE4D protein protein. 29 4.0
CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein. 31 4.9
BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying pro... 31 4.9
AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein. 31 4.9
AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens ... 31 4.9
AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptas... 30 6.4
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 140 bits (340), Expect = 3e-33
Identities = 63/74 (85%), Positives = 67/74 (90%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 212
GKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 213 TRIIDVVYNASNNE 254
TRIIDVVYNASNNE
Sbjct: 76 TRIIDVVYNASNNE 89
Score = 129 bits (311), Expect = 1e-29
Identities = 58/85 (68%), Positives = 70/85 (82%)
Frame = +2
Query: 254 MVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 433
+VRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 90 LVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Query: 434 LARQRLAKVEGALEEQFHTGRLLAC 508
R++ AK+ LEEQF G+LLAC
Sbjct: 150 DERKKNAKISSLLEEQFQQGKLLAC 174
Score = 69.3 bits (162), Expect = 1e-11
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 609
G +ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 140 bits (340), Expect = 3e-33
Identities = 63/74 (85%), Positives = 67/74 (90%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 212
GKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 213 TRIIDVVYNASNNE 254
TRIIDVVYNASNNE
Sbjct: 76 TRIIDVVYNASNNE 89
Score = 129 bits (311), Expect = 1e-29
Identities = 58/85 (68%), Positives = 70/85 (82%)
Frame = +2
Query: 254 MVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 433
+VRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 90 LVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Query: 434 LARQRLAKVEGALEEQFHTGRLLAC 508
R++ AK+ LEEQF G+LLAC
Sbjct: 150 DERKKNAKISSLLEEQFQQGKLLAC 174
Score = 69.3 bits (162), Expect = 1e-11
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 609
G +ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 140 bits (340), Expect = 3e-33
Identities = 63/74 (85%), Positives = 67/74 (90%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 212
GKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 213 TRIIDVVYNASNNE 254
TRIIDVVYNASNNE
Sbjct: 76 TRIIDVVYNASNNE 89
Score = 129 bits (311), Expect = 1e-29
Identities = 58/85 (68%), Positives = 70/85 (82%)
Frame = +2
Query: 254 MVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 433
+VRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 90 LVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Query: 434 LARQRLAKVEGALEEQFHTGRLLAC 508
R++ AK+ LEEQF G+LLAC
Sbjct: 150 DERKKNAKISSLLEEQFQQGKLLAC 174
Score = 69.3 bits (162), Expect = 1e-11
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 609
G +ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 140 bits (340), Expect = 3e-33
Identities = 63/74 (85%), Positives = 67/74 (90%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 212
GKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 213 TRIIDVVYNASNNE 254
TRIIDVVYNASNNE
Sbjct: 76 TRIIDVVYNASNNE 89
Score = 129 bits (311), Expect = 1e-29
Identities = 58/85 (68%), Positives = 70/85 (82%)
Frame = +2
Query: 254 MVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 433
+VRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 90 LVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Query: 434 LARQRLAKVEGALEEQFHTGRLLAC 508
R++ AK+ LEEQF G+LLAC
Sbjct: 150 DERKKNAKISSLLEEQFQQGKLLAC 174
Score = 69.3 bits (162), Expect = 1e-11
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 609
G +ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 129 bits (311), Expect = 1e-29
Identities = 58/85 (68%), Positives = 70/85 (82%)
Frame = +2
Query: 254 MVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 433
+VRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 70 LVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 129
Query: 434 LARQRLAKVEGALEEQFHTGRLLAC 508
R++ AK+ LEEQF G+LLAC
Sbjct: 130 DERKKNAKISSLLEEQFQQGKLLAC 154
Score = 80.6 bits (190), Expect = 5e-15
Identities = 46/74 (62%), Positives = 50/74 (67%)
Frame = +3
Query: 33 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 212
GKR P KKRKYELGRPAANT++GP+RIH+VR RGG C TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG-------------------C-TRK 55
Query: 213 TRIIDVVYNASNNE 254
TRIIDVVYNASNNE
Sbjct: 56 TRIIDVVYNASNNE 69
Score = 69.3 bits (162), Expect = 1e-11
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 609
G +ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 149 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 69.3 bits (162), Expect = 1e-11
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +1
Query: 490 GAFAGLLASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 609
G +ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 41 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 80
Score = 56.0 bits (129), Expect = 1e-07
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = +2
Query: 371 LTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLAC 508
LT EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLAC 46
>AJ250854-1|CAC03757.1| 215|Homo sapiens cAMP-specific
phosphodiesterase 4D protein.
Length = 215
Score = 29.5 bits (63), Expect(2) = 2.4
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 112 VSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNGAY 264
+ TPF V+ L TVR + +T+L DR P+ I T+ G Y
Sbjct: 158 IVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINKATITGLY 208
Score = 21.0 bits (42), Expect(2) = 2.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 82 PLQTPGSVLSVSTPFVH 132
P+ +PGS L + FVH
Sbjct: 104 PMTSPGSGLILQANFVH 120
>BC013902-1|AAH13902.1| 486|Homo sapiens FAD-dependent
oxidoreductase domain containing 1 protein.
Length = 486
Score = 31.1 bits (67), Expect = 3.7
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 472 RRAIPHGAFAGLLASRPGQCGRADGYIL--EGKELEFYLRKIKS 597
RR +PHG GLL RPG R G+ L +GK E +KIKS
Sbjct: 3 RRVLPHGMGRGLLTRRPGT--RRGGFSLDWDGKVSEI-KKKIKS 43
>AF103801-1|AAF02421.1| 486|Homo sapiens unknown protein.
Length = 486
Score = 31.1 bits (67), Expect = 3.7
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 472 RRAIPHGAFAGLLASRPGQCGRADGYIL--EGKELEFYLRKIKS 597
RR +PHG GLL RPG R G+ L +GK E +KIKS
Sbjct: 3 RRVLPHGMGRGLLTRRPGT--RRGGFSLDWDGKVSEI-KKKIKS 43
>BT007398-1|AAP36062.1| 219|Homo sapiens phosphodiesterase 4D,
cAMP-specific (phosphodiesterase E3 dunce homolog,
Drosop protein.
Length = 219
Score = 28.7 bits (61), Expect(2) = 4.0
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 112 VSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNGAYKD 270
+ TPF V+ L TVR + +T+L DR P+ I T+ G++ +
Sbjct: 158 IVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINKATITGSWME 210
Score = 21.0 bits (42), Expect(2) = 4.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 82 PLQTPGSVLSVSTPFVH 132
P+ +PGS L + FVH
Sbjct: 104 PMTSPGSGLILQANFVH 120
>BC008390-1|AAH08390.1| 219|Homo sapiens PDE4D protein protein.
Length = 219
Score = 28.7 bits (61), Expect(2) = 4.0
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 112 VSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNGAYKD 270
+ TPF V+ L TVR + +T+L DR P+ I T+ G++ +
Sbjct: 158 IVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINKATITGSWME 210
Score = 21.0 bits (42), Expect(2) = 4.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 82 PLQTPGSVLSVSTPFVH 132
P+ +PGS L + FVH
Sbjct: 104 PMTSPGSGLILQANFVH 120
>CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein.
Length = 201
Score = 30.7 bits (66), Expect = 4.9
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 350 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 496
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying
protein 6 protein.
Length = 201
Score = 30.7 bits (66), Expect = 4.9
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 350 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 496
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein.
Length = 201
Score = 30.7 bits (66), Expect = 4.9
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 350 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 496
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ11749 fis, clone HEMBA1005558, weakly similar to
NUCLEAR PROTEIN SNF7. ).
Length = 201
Score = 30.7 bits (66), Expect = 4.9
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 350 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 496
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptase
protein.
Length = 523
Score = 30.3 bits (65), Expect = 6.4
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = -2
Query: 217 RVLRVEHSDPQEKLPVSRRSARYLVFPPRERTE----WIR*GPSLVFAAGRPNSYFLFLR 50
R R E PQ+ + V RS R L PPR RT+ W S AG + LR
Sbjct: 411 RTARCELRSPQQPVSVPGRSPRALWRPPRRRTQTPVAWCSCSASTAPLAG------VRLR 464
Query: 49 MGARFPSGGP 20
G P+G P
Sbjct: 465 AGLPAPAGAP 474
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,486,124
Number of Sequences: 237096
Number of extensions: 1909301
Number of successful extensions: 4609
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4609
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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