Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00269
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    26   0.27 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          26   0.27 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    25   0.83 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    24   1.1  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    24   1.1  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    24   1.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   3.3  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   3.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.7  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   7.7  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = -1

Query: 299 RTVSNRAAFSPPL*TSHHTCGPLAHSSVLVAQTTNLYNK--GSLETVDKQQTCLSSLRM* 126
           +T  N A+ SP   +S+++  P A           LYN+  GS + V K +TC       
Sbjct: 152 KTSPNEASMSPQSTSSNNSASPKACQF--------LYNQFPGSSQVVVKDETCQYDTESS 203

Query: 125 FKFNTP 108
           ++FN P
Sbjct: 204 YQFNDP 209


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = -1

Query: 299 RTVSNRAAFSPPL*TSHHTCGPLAHSSVLVAQTTNLYNK--GSLETVDKQQTCLSSLRM* 126
           +T  N A+ SP   +S+++  P A           LYN+  GS + V K +TC       
Sbjct: 172 KTSPNEASMSPQSTSSNNSASPKACQF--------LYNQFPGSSQVVVKDETCQYDTESS 223

Query: 125 FKFNTP 108
           ++FN P
Sbjct: 224 YQFNDP 229


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = +3

Query: 312 EKQKPDVSDNEISSKFV 362
           +K+KP++SD+EI +K V
Sbjct: 168 KKEKPEMSDSEIVAKLV 184


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 633 CLTGTLVLFLFNEIILSNFMLLHMPTILHIVS 538
           CL   +V  L    +L  F L H    LHI++
Sbjct: 136 CLILAVVFLLTLSALLEGFTLYHTTAYLHIIT 167


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 633 CLTGTLVLFLFNEIILSNFMLLHMPTILHIVS 538
           CL   +V  L    +L  F L H    LHI++
Sbjct: 136 CLILAVVFLLTLSALLEGFTLYHTTAYLHIIT 167


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 633 CLTGTLVLFLFNEIILSNFMLLHMPTILHIVS 538
           CL   +V  L    +L  F L H    LHI++
Sbjct: 136 CLILAVVFLLTLSALLEGFTLYHTTAYLHIIT 167


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 283 RLDTVRRLCGRNKSRMFLTMKYH 351
           R +  + L  R KSR  LTMK+H
Sbjct: 547 RTEIYKGLIDRIKSREKLTMKFH 569


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 702 VLKLLHQYEGPQVQRDFPR 646
           V K+   YE P V +DFP+
Sbjct: 617 VFKIGEDYEMPPVPKDFPQ 635



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 369 FRGLKDVKDLINEEYLAASIESACHDIQYPA 461
           FRGL D  +     Y  A +E       YP+
Sbjct: 346 FRGLMDCDERFTRAYQVAVLEYKGTQTNYPS 376


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +3

Query: 462 IAKICKDNTAHFENYI 509
           I ++CK N  H++N++
Sbjct: 202 IKQVCKLNNGHYKNFL 217


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +3

Query: 462 IAKICKDNTAHFENYI 509
           I ++CK N  H++N++
Sbjct: 27  IKQVCKLNNGHYKNFL 42


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +2

Query: 158 VCLLSLTILC 187
           VCLLSL ILC
Sbjct: 265 VCLLSLIILC 274



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +3

Query: 411 YLAASIESACHDIQYPAIAKICKDNTAHFENYIITF 518
           Y    I S C   +      +C+    +F+NYI  F
Sbjct: 127 YGVVIIYSICVQTEKSVFDFLCRHTVEYFQNYIHFF 162


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 204  LRDKYRRMC*GTTSMVRSLKRG 269
            L D   R C G+  ++RSL RG
Sbjct: 969  LDDFSNRCCGGSFPLLRSLNRG 990


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 577 EIGQYYFVEQEKHQRAC 627
           +I Q Y  E EK+++AC
Sbjct: 153 QIRQIYHQELEKYEQAC 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,194
Number of Sequences: 336
Number of extensions: 3897
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)