Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00269
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23528-2|AAK31387.1| 984|Caenorhabditis elegans Calsyntenin/alc... 31 0.84
AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin p... 31 0.84
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ... 31 1.1
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr... 29 3.4
U39667-5|AAC69008.1| 190|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF101316-1|AAC69231.1| 684|Caenorhabditis elegans Hypothetical ... 29 4.5
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 28 7.8
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 7.8
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 7.8
>U23528-2|AAK31387.1| 984|Caenorhabditis elegans
Calsyntenin/alcadein homolog protein1, isoform a
protein.
Length = 984
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 273 ECGAVGHCTATVWEKQKPDVSDNEISSKFVKLFRGLKDVKDLIN 404
E GA A W P+V DNE S + LF G+ DV +++
Sbjct: 415 EAGATSDFRAAEWRWSMPEVCDNEWHS-YSLLFNGIDDVNVIVD 457
>AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin
protein.
Length = 984
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 273 ECGAVGHCTATVWEKQKPDVSDNEISSKFVKLFRGLKDVKDLIN 404
E GA A W P+V DNE S + LF G+ DV +++
Sbjct: 415 EAGATSDFRAAEWRWSMPEVCDNEWHS-YSLLFNGIDDVNVIVD 457
>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
protein R193.2 protein.
Length = 1853
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2
Query: 679 RRTPSTTGFSKELIFMLDRHVGAFLVQRNNIVQF 578
+RTPST+ F LI+++D+ G +NIVQF
Sbjct: 1289 KRTPSTSNFFGNLIYVVDQS-GNSYADHSNIVQF 1321
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -1
Query: 620 RWCFSCSTK*YCPISCCYTC--RRFCTLSRPMC 528
R C C K C +CC TC R CT RP C
Sbjct: 72 RCCCCCRPK--CCCTCCRTCCCTRCCTCCRPCC 102
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -1
Query: 620 RWCFSCSTK*YCPISCCYTC--RRFCTLSRPMC 528
R C C K C +CC TC R CT RP C
Sbjct: 74 RCCCCCRPK--CCCTCCRTCCCTRCCTCCRPCC 104
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -1
Query: 620 RWCFSCSTK*YCPISCCYTC--RRFCTLSRPMC 528
R C C K C +CC TC R CT RP C
Sbjct: 77 RCCCCCRPK--CCCTCCRTCCCTRCCTCCRPCC 107
>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical protein
C09H6.1a protein.
Length = 1311
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 455 SCDREDMQRQHGPFRKLHHHVLKSNTSAETMCKIVGMCNNMKLDN-IISLNKKSTNVPVK 631
SCD D + F +L+HH++K T ++C+ +L+N +I + + T
Sbjct: 1194 SCDYSDNTKSVVDFHQLNHHIVKDQT-LHSICQSA----KFRLENGVIQIPEFQTEKSKP 1248
Query: 632 HKDQLLGKSR 661
D+ + K+R
Sbjct: 1249 TPDEFVSKTR 1258
>U39667-5|AAC69008.1| 190|Caenorhabditis elegans Hypothetical
protein C18A11.4 protein.
Length = 190
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 655 FSKELIFMLDRHVGAFLVQRNN 590
F KEL++ H+G FL+ RNN
Sbjct: 95 FGKELLYWNGPHIGQFLIIRNN 116
>AF101316-1|AAC69231.1| 684|Caenorhabditis elegans Hypothetical
protein F52F10.3 protein.
Length = 684
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 411 YLAASIESACHDIQYPAIAKICKDNTAHFENYIITFSNRTHRPR 542
Y+ ++ ++Q+P + + CKD H YI F N HR R
Sbjct: 348 YVQGPFAASFSNVQFPQV-EACKDYWWHNLLYINNFDNSQHRER 390
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 587 CPISCCYTCRRFCTLSRPMC 528
C CC CRR CT R C
Sbjct: 88 CRPKCCCCCRRCCTCCRTCC 107
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 587 CPISCCYTCRRFCTLSRPMC 528
C CC CRR CT R C
Sbjct: 89 CRPRCCCCCRRCCTCCRTCC 108
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 620 RWCFSCSTK*YCPISCCYTCRRFCTLSRPMC 528
R C C C +CC C R CT RP C
Sbjct: 92 RCCCCCRRCCTCCRTCC--CTRCCTCCRPCC 120
>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical protein
C09H6.1b protein.
Length = 1309
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 455 SCDREDMQRQHGPFRKLHHHVLKSNTSAETMCKIVGMCNNMKLDN-IISLNKKSTNVPVK 631
SCD D + F +L+HH++K T ++C+ +L+N +I + + + P
Sbjct: 1194 SCDYSDNTKSVVDFHQLNHHIVKDQT-LHSICQSA----KFRLENGVIQIPETEKSKPT- 1247
Query: 632 HKDQLLGKSR 661
D+ + K+R
Sbjct: 1248 -PDEFVSKTR 1256
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 587 CPISCCYTCRRFCTLSRPMC 528
C CC CRR CT R C
Sbjct: 87 CRPRCCCCCRRCCTCCRTCC 106
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 620 RWCFSCSTK*YCPISCCYTCRRFCTLSRPMC 528
R C C C +CC C R CT RP C
Sbjct: 90 RCCCCCRRCCTCCRTCC--CTRCCTCCRPCC 118
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 391 LTSLSPRNSFTNFDDISLSETSGFCFSHTVAVQCPTA 281
L SLS + +D ++S +S F T V CPTA
Sbjct: 347 LVSLSEKAQDVQSNDFTISASSAFTVISTSGVLCPTA 383
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 587 CPISCCYTCRRFCTLSRPMC 528
C CC CRR CT R C
Sbjct: 88 CRPRCCCCCRRCCTCCRTCC 107
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 620 RWCFSCSTK*YCPISCCYTCRRFCTLSRPMC 528
R C C C +CC C R CT RP C
Sbjct: 91 RCCCCCRRCCTCCRTCC--CTRCCTCCRPCC 119
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 587 CPISCCYTCRRFCTLSRPMC 528
C CC CRR CT R C
Sbjct: 89 CRPRCCCCCRRCCTCCRTCC 108
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 620 RWCFSCSTK*YCPISCCYTCRRFCTLSRPMC 528
R C C C +CC C R CT RP C
Sbjct: 92 RCCCCCRRCCTCCRTCC--CTRCCTCCRPCC 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,564,705
Number of Sequences: 27780
Number of extensions: 393653
Number of successful extensions: 1223
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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