Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00268
         (508 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical pr...    99   2e-21
Z77664-2|CAB01217.1|  643|Caenorhabditis elegans Hypothetical pr...    32   0.27 
Z73970-5|CAA98248.1|  643|Caenorhabditis elegans Hypothetical pr...    32   0.27 
Z98877-6|CAD56617.1|  432|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z98877-3|CAB54472.2|  537|Caenorhabditis elegans Hypothetical pr...    29   1.9  
AF100663-3|AAC68980.1|  529|Caenorhabditis elegans Udp-glucurono...    28   4.5  

>Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical
           protein T24B8.1 protein.
          Length = 134

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 45/74 (60%), Positives = 63/74 (85%)
 Frame = +2

Query: 254 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 433
           S+++TR +LPNG++KVLV NVK+L++L+MQ+ KY  EI HGVS+K RK IVERA QL+I+
Sbjct: 61  SDRRTRFVLPNGYKKVLVQNVKDLDMLLMQSYKYIGEIGHGVSAKSRKGIVERAAQLNIK 120

Query: 434 VTNAAARLRSQENE 475
           +TN  ARLR++E+E
Sbjct: 121 LTNGNARLRTEESE 134



 Score = 73.3 bits (172), Expect = 9e-14
 Identities = 30/54 (55%), Positives = 40/54 (74%)
 Frame = +3

Query: 105 IXXKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGPTRR 266
           +  K+  +F RH+SDRY ++  +WRKP+GIDNRVRRRF+G   MP IG+G  RR
Sbjct: 11  VVKKKLTKFKRHESDRYRRVAPSWRKPKGIDNRVRRRFRGMRAMPTIGHGSDRR 64


>Z77664-2|CAB01217.1|  643|Caenorhabditis elegans Hypothetical
           protein C29A12.6 protein.
          Length = 643

 Score = 31.9 bits (69), Expect = 0.27
 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
 Frame = +3

Query: 27  VSPRGSLSRFLKKHTRW---TIRPVYRPTIXXKRTKRFIRHQSDRYDKLKRNWRKPRGID 197
           V  + +++R  KK T     T R +   TI  K TK+++   + +YD  K    +     
Sbjct: 313 VDTKFTITRTFKKMTTIPMSTTRRMTTTTIRPKTTKKYLSRSTSKYDAKKTT--RSYQTT 370

Query: 198 NRVRRRFKGQYLMPNIGYGPTRRPVICSQMDS 293
            R   +    +  P   +G TR P   S +DS
Sbjct: 371 TRTTSKPDNTFWHPTESFGTTRSPAPVSTIDS 402


>Z73970-5|CAA98248.1|  643|Caenorhabditis elegans Hypothetical
           protein C29A12.6 protein.
          Length = 643

 Score = 31.9 bits (69), Expect = 0.27
 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
 Frame = +3

Query: 27  VSPRGSLSRFLKKHTRW---TIRPVYRPTIXXKRTKRFIRHQSDRYDKLKRNWRKPRGID 197
           V  + +++R  KK T     T R +   TI  K TK+++   + +YD  K    +     
Sbjct: 313 VDTKFTITRTFKKMTTIPMSTTRRMTTTTIRPKTTKKYLSRSTSKYDAKKTT--RSYQTT 370

Query: 198 NRVRRRFKGQYLMPNIGYGPTRRPVICSQMDS 293
            R   +    +  P   +G TR P   S +DS
Sbjct: 371 TRTTSKPDNTFWHPTESFGTTRSPAPVSTIDS 402


>Z98877-6|CAD56617.1|  432|Caenorhabditis elegans Hypothetical
           protein Y69H2.3d protein.
          Length = 432

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
 Frame = -3

Query: 311 CELGPYGIHLGAYDGSSCWTVTD-VGHQVLTLESPADSVVNTSRFTPIPLKFVIAIRLMP 135
           CEL P  IH+ A   +SC   +  V HQV     P D +         P+K  I  R   
Sbjct: 317 CELMPMCIHVNACASTSCLVGSQCVLHQVQCFTQPCDPIAQCE----APIKKPINRRCRS 372

Query: 134 DKSLRPLXXDCRPVNRSYSP 75
           ++   P    C     +  P
Sbjct: 373 NEKFEPCKTVCSDTKCNEEP 392


>Z98877-3|CAB54472.2|  537|Caenorhabditis elegans Hypothetical
           protein Y69H2.3a protein.
          Length = 537

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
 Frame = -3

Query: 311 CELGPYGIHLGAYDGSSCWTVTD-VGHQVLTLESPADSVVNTSRFTPIPLKFVIAIRLMP 135
           CEL P  IH+ A   +SC   +  V HQV     P D +         P+K  I  R   
Sbjct: 422 CELMPMCIHVNACASTSCLVGSQCVLHQVQCFTQPCDPIAQCE----APIKKPINRRCRS 477

Query: 134 DKSLRPLXXDCRPVNRSYSP 75
           ++   P    C     +  P
Sbjct: 478 NEKFEPCKTVCSDTKCNEEP 497


>AF100663-3|AAC68980.1|  529|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein20 protein.
          Length = 529

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 21/59 (35%), Positives = 29/59 (49%)
 Frame = -3

Query: 362 LRSTSCFASSRFPAL*HCELGPYGIHLGAYDGSSCWTVTDVGHQVLTLESPADSVVNTS 186
           L S  CFASS +  L +  L  +G     + G++  T+TD GH V  L    D  + TS
Sbjct: 7   LFSAICFASS-YKILFYTNL--FGHSHVKFLGAAADTLTDAGHNVTVLIPVFDKALKTS 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,078,340
Number of Sequences: 27780
Number of extensions: 218206
Number of successful extensions: 719
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)