Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00268
(508 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 138 4e-35
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 24 1.0
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 24 1.0
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 24 1.0
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 1.8
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 4.2
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 4.2
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 4.2
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 21 5.6
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 21 7.3
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 21 7.3
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 21 7.3
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 9.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.7
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 138 bits (333), Expect = 4e-35
Identities = 67/74 (90%), Positives = 70/74 (94%)
Frame = +2
Query: 254 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 433
SNKKTRHMLP GFRKVLVHNVKELE+LMMQNRK+CAEIAHG SSKKRK IVERAQQLSIR
Sbjct: 61 SNKKTRHMLPTGFRKVLVHNVKELEVLMMQNRKFCAEIAHGGSSKKRKSIVERAQQLSIR 120
Query: 434 VTNAAARLRSQENE 475
VT A+ARLRSQENE
Sbjct: 121 VTYASARLRSQENE 134
Score = 123 bits (296), Expect = 1e-30
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +3
Query: 81 IRPVYRPTIXXKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGPT 260
IRPVYRPTI KRTK+FIRHQSDRY KLKRNWRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 3 IRPVYRPTIVKKRTKKFIRHQSDRYSKLKRNWRKPKGIDNRVRRRFKGQYLMPNIGYGSN 62
Query: 261 RR 266
++
Sbjct: 63 KK 64
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 23.8 bits (49), Expect = 1.0
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 5 FFPFSCGRVTAWFTVAFLKETYKMDYKTCLQADNRXKEDEEIY 133
++P ++A F + + + + + +KT L A N E + IY
Sbjct: 100 YYPQLLREMSALFKLFYHAKDFDIFFKTALWAKNNINEAQYIY 142
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 23.8 bits (49), Expect = 1.0
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 5 FFPFSCGRVTAWFTVAFLKETYKMDYKTCLQADNRXKEDEEIY 133
++P ++A F + + + + + +KT L A N E + IY
Sbjct: 100 YYPQLLREMSALFKLFYHAKDFDIFFKTALWAKNNINEAQYIY 142
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 23.8 bits (49), Expect = 1.0
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 45 LSRFLKKHTRWTIRP 89
+S FLKK+T +T+RP
Sbjct: 283 VSEFLKKNTGFTLRP 297
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.0 bits (47), Expect = 1.8
Identities = 16/68 (23%), Positives = 32/68 (47%)
Frame = +2
Query: 209 QAIQGSILDAQHRLRSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSK 388
QA ++L A+ + + +P+G+ + + EL L + + + + HG+
Sbjct: 59 QAKDSNVLAAKVWNGQYARVQQSMPDGWETEISDQMLELRDLPISGKPFQIRMKHGLI-- 116
Query: 389 KRKLIVER 412
R LIV+R
Sbjct: 117 -RDLIVDR 123
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -1
Query: 496 LIIQLYLFVLLGPEASGRI 440
L + +LFV+ ++SGRI
Sbjct: 15 LFVNSFLFVIAAQDSSGRI 33
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -1
Query: 496 LIIQLYLFVLLGPEASGRI 440
L + +LFV+ ++SGRI
Sbjct: 15 LFVNSFLFVIAAQDSSGRI 33
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -1
Query: 496 LIIQLYLFVLLGPEASGRI 440
L + +LFV+ ++SGRI
Sbjct: 15 LFVNSFLFVIAAQDSSGRI 33
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/35 (22%), Positives = 19/35 (54%)
Frame = +3
Query: 24 AVSPRGSLSRFLKKHTRWTIRPVYRPTIXXKRTKR 128
+V R + +++++R+ +RP +RT+R
Sbjct: 106 SVFSRQDIETIIRRNSRYPLRPPQEVISHYRRTRR 140
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 463 GPEASGRIRHSDA 425
GP GR +H+DA
Sbjct: 45 GPNELGRFKHTDA 57
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 463 GPEASGRIRHSDA 425
GP GR +H+DA
Sbjct: 50 GPNELGRFKHTDA 62
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 463 GPEASGRIRHSDA 425
GP GR +H+DA
Sbjct: 50 GPNELGRFKHTDA 62
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 20.6 bits (41), Expect = 9.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 241 TSVTVQQEDPSYAPKWIP 294
T+V V+QE Y KW P
Sbjct: 69 TNVWVEQEWNDYKLKWNP 86
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 9.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 352 LPVLHHQDFQLFNI 311
LP L H D Q FN+
Sbjct: 1031 LPELRHGDIQGFNV 1044
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 9.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 352 LPVLHHQDFQLFNI 311
LP L H D Q FN+
Sbjct: 1027 LPELRHGDIQGFNV 1040
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,703
Number of Sequences: 438
Number of extensions: 2575
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -