Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00267
(609 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0079 - 554936-554977,555108-555297,555384-555430,556039-55... 53 2e-07
02_02_0704 + 13095449-13095584,13095671-13095990,13096102-130964... 33 0.18
09_04_0245 + 15995689-15995742,15995979-15996075,15996165-159961... 32 0.31
08_01_0621 - 5426210-5427787 32 0.41
01_01_1150 + 9161058-9162722,9162837-9162920,9163095-9163199,916... 30 1.2
12_01_0042 + 337131-337612,338727-338898,338996-339204,339414-33... 30 1.6
03_01_0336 - 2659349-2659486,2659607-2659758,2660257-2660365,266... 30 1.6
02_02_0296 + 8678488-8679798 29 2.2
09_06_0048 + 20477076-20478547,20478643-20478722,20478880-204788... 29 2.9
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999... 28 5.0
10_01_0144 - 1705429-1706250 28 5.0
05_04_0211 + 19088656-19088965,19089911-19089987,19090964-190910... 28 5.0
09_06_0073 + 20687057-20687246,20689004-20689203,20689786-206899... 28 6.7
05_03_0633 + 16416913-16417009,16417976-16418060,16418398-164185... 28 6.7
11_01_0482 - 3714442-3715593 27 8.8
10_08_0198 + 15688142-15690427,15690524-15690607,15691232-156913... 27 8.8
08_02_0610 + 19307537-19308011,19308187-19310846 27 8.8
07_01_0166 + 1164903-1165144,1165839-1166074,1166719-1166781,116... 27 8.8
05_03_0079 + 8212648-8212724,8212844-8212993,8213211-8213351,821... 27 8.8
03_02_0842 + 11682332-11683802,11683858-11683940,11684751-116865... 27 8.8
02_03_0220 + 16545571-16545573,16545717-16545818,16545980-165460... 27 8.8
>08_01_0079 -
554936-554977,555108-555297,555384-555430,556039-556139,
556223-556271,556432-556494,556602-556695,556822-556924,
557719-557791,557872-557984,558068-558149,558386-558913,
559015-559098,560156-560305,561021-561191,561759-561809,
562601-562738,562823-562894,563236-563391,563681-563839,
564080-564180,564577-564829
Length = 939
Score = 53.2 bits (122), Expect = 2e-07
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +2
Query: 2 FHPYDPIAYRIEPLINPGLKNVKPEQIPHHKGRKRMHLELKDTMARVGA 148
FHP+DP+AYRIEPL+ + +P +P+H+G KR+H+ +++ + A
Sbjct: 736 FHPFDPVAYRIEPLVCEDYISKRPVIVPYHRGGKRIHVGVQEFTEDIAA 784
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +1
Query: 265 DEREDGSSNATREMLGKLNEGRRIDYVLQEAPLEVINEYLFAMTSHVGYWESEDTMLLML 444
+E+E E L +GR ID+VLQE + + YL A+ SH YW DT L +L
Sbjct: 820 NEKEKSYGYMMMERLTGSPDGR-IDHVLQEKTFQ--HPYLSALGSHTNYWRDHDTALFIL 876
Query: 445 REIYADMGVDPDSTVPQQ 498
+ +Y D+ +P + P++
Sbjct: 877 KHLYRDIPEEPPTDDPER 894
>02_02_0704 +
13095449-13095584,13095671-13095990,13096102-13096423,
13096556-13096632,13096744-13097127
Length = 412
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 55 TEERETGADTAPQGKEEDAPGTERHHGP 138
+EE T AD A GK+E+A +ERH P
Sbjct: 87 SEEESTHADAAKSGKKEEAETSERHSSP 114
>09_04_0245 + 15995689-15995742,15995979-15996075,15996165-15996185,
15996442-15996573,15996707-15996834,15996919-15997203,
15997391-15997521,15999700-15999817,16000609-16000703,
16001437-16001511,16001860-16001911,16002767-16002859,
16003625-16003690,16003785-16003867,16003942-16004054,
16005271-16005410,16005569-16005643,16006084-16006160,
16006426-16006514,16008039-16008085,16009004-16009138,
16009298-16009345,16009605-16009667,16009709-16009730,
16010284-16010458,16014250-16014321,16014887-16014958,
16015904-16016005,16016197-16016225,16016333-16016403,
16016549-16016597,16016684-16016784,16017495-16017623,
16017683-16017752,16017975-16018194,16019368-16019389,
16019457-16019604,16021569-16021693,16022344-16022774,
16022984-16023110,16023241-16023292,16023351-16023502
Length = 1461
Score = 32.3 bits (70), Expect = 0.31
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 376 EYLFAMTSHVGYWESEDTMLLMLREIYADMGVDPDSTVPQQ 498
+++ + S YW DT L +LR +Y D+ +P + P++
Sbjct: 966 DHVLQVYSCSNYWRDHDTALFILRHLYRDIPKEPPTDDPER 1006
>08_01_0621 - 5426210-5427787
Length = 525
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 393 HGEQVLVDDLEWRLLEHVVDP 331
+G +V V DL WR L H+VDP
Sbjct: 168 YGGKVFVTDLNWRYLSHLVDP 188
>01_01_1150 +
9161058-9162722,9162837-9162920,9163095-9163199,
9163310-9163418,9163956-9164107,9164210-9164356
Length = 753
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 325 GRRIDYVLQEAPLEVINEYLFAMTSHVGYWESEDTMLLMLREI 453
G + D +L + P E +T H+ YW +E+ M L + I
Sbjct: 515 GTKFDVILVDPPWEEYVHRAPGITDHIEYWNAEEIMNLKIEAI 557
>12_01_0042 +
337131-337612,338727-338898,338996-339204,339414-339572,
339914-340262
Length = 456
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = -1
Query: 522 VSSSVREALLRDRGVRIDSHIRVDLAQHQQHRVFGLPVSDVAGHGEQVLVDDLEWRLLEH 343
V SSV +LL DRG + + V+ QHQ+ + P S G + V+VD R E
Sbjct: 23 VVSSV--SLLFDRGQDAQAQLAVEQHQHQEVLLKQKPASAAVGEQKSVVVDQSSLRSQEA 80
Query: 342 VVDPAALIQ 316
V + +Q
Sbjct: 81 QVQWTSELQ 89
>03_01_0336 -
2659349-2659486,2659607-2659758,2660257-2660365,
2660459-2660563,2660874-2660957,2661072-2662745
Length = 753
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 325 GRRIDYVLQEAPLEVINEYLFAMTSHVGYWESEDTMLLMLREI 453
G + D +L + P E +T H+ YW E+ M L + I
Sbjct: 518 GTKFDVILVDPPWEEYVHRAPGITDHIEYWNGEEIMNLKIEAI 560
>02_02_0296 + 8678488-8679798
Length = 436
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = -1
Query: 477 RIDSHIRVDLAQHQQHRVFGLPVSDVAGHGEQVLVDDLEWRLLEHVVDPAALIQLAEHL 301
R+ + +R + QH + R+ + G E ++ +WRLL H + AA + L++ +
Sbjct: 23 RVPAQVRHENRQHYEPRLVSIGPY-YRGRDELRAMEQHKWRLLRHFLQRAATVPLSDFM 80
>09_06_0048 + 20477076-20478547,20478643-20478722,20478880-20478893,
20480164-20481199,20481275-20481402,20481673-20481732,
20481774-20481878,20481971-20482055,20482315-20482470,
20482562-20482831,20482877-20483671,20483844-20483903,
20484062-20485134
Length = 1777
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 448 EIYADMGVDPDSTVPQQSLTDRGRDSRDRTE*LRARVRRQVIAPCEG 588
E++AD +DPD P++ D GR S +++ ++ ++P +G
Sbjct: 1022 EVHADHTMDPDYESPEEQEQDTGRSSFNKSRGSFSKKDNNPVSPGKG 1068
>12_02_0800 + 23299674-23299678,23299714-23299791,23299876-23299920,
23300052-23300415,23300493-23300574,23300793-23300873,
23300974-23302106,23302202-23302350,23302426-23302516,
23303628-23305940
Length = 1446
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 1 IPSLRSDSVQNRAADKPRTEERETGA--DTAPQGKEEDAPGTERHHG 135
+PS +S +N+ DK ER TGA +TAP+ K+ + T + HG
Sbjct: 1078 LPSEKSCE-ENKIRDK-EIVERSTGAKPETAPEAKKWEGKKTSKGHG 1122
>10_01_0144 - 1705429-1706250
Length = 273
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/83 (27%), Positives = 28/83 (33%)
Frame = +3
Query: 330 PDRLRAPGGATRGHQRVPVRHDQPRRILGVXXXXXXXXXXXXXGYGSRSGLHGPSAEPHG 509
PD G G +RV V P G +RSG G PH
Sbjct: 68 PDGWGPDGKQAEGRRRVEVAPAPPTARGGRAGVVASGSGPSPLPRVARSGQSGAGRAPHQ 127
Query: 510 QRTRLQRQDGVITRESPTTSHSA 578
+RTR Q R PT + +A
Sbjct: 128 RRTRRQLGQSWHRRRRPTVADAA 150
>05_04_0211 +
19088656-19088965,19089911-19089987,19090964-19091047,
19091130-19091243,19091861-19091947,19092000-19092107,
19092643-19092710,19093044-19093131,19093225-19093298,
19093454-19093817,19094024-19094070,19094154-19094235,
19095698-19095817
Length = 540
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 363 RGHQRVPVRHDQPRRILGV 419
RGH RVPV PR I+G+
Sbjct: 292 RGHSRVPVYSGNPRNIIGL 310
>09_06_0073 +
20687057-20687246,20689004-20689203,20689786-20689926,
20689995-20690075,20690564-20690688,20690763-20690807,
20691853-20691877,20692282-20693073
Length = 532
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 336 RLRAPGGATRGHQRVPVRHDQPRRIL 413
RL P RG + P RH +PRR++
Sbjct: 462 RLYPPASVVRGGRHTPRRHARPRRLV 487
>05_03_0633 +
16416913-16417009,16417976-16418060,16418398-16418551,
16418808-16419023,16419105-16419241,16419317-16419408,
16419622-16419804,16421722-16421819,16422021-16422070,
16424605-16424756,16424944-16425069,16426315-16426523
Length = 532
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = -1
Query: 459 RVDLAQHQQHRVFGLPVSDVAGHGEQVLVDDLEWRLLEHVVDPAALIQLAEHLARRIART 280
+VD A+ +++ V+ + + G G+ L+D+ + + + VD HL + +R
Sbjct: 160 KVDDAEFEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDK------NYHLKMKASRF 213
Query: 279 VFPFIKQ 259
+F I Q
Sbjct: 214 IFSEISQ 220
>11_01_0482 - 3714442-3715593
Length = 383
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 435 QHRVFGLPVSDVAGHGEQVLVD 370
+HRV G ++ VA HG+ VLV+
Sbjct: 84 KHRVHGPSINVVAAHGDSVLVE 105
>10_08_0198 +
15688142-15690427,15690524-15690607,15691232-15691336,
15691420-15691528,15693037-15693188,15693278-15693583
Length = 1013
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +1
Query: 325 GRRIDYVLQEAPLEVINEYLFAMTSHVGYWESEDTMLLMLREI 453
G + D +L + P E +T H+ YW ++ M L + I
Sbjct: 722 GTKFDVILIDPPWEEYVHRAPGITDHIEYWTPDEIMNLKIEAI 764
>08_02_0610 + 19307537-19308011,19308187-19310846
Length = 1044
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 327 PPDRLRAPGGATRGHQRVPVRHDQPR 404
PP LR P A RG R P+R Q R
Sbjct: 901 PPPMLRVPAQARRGAGRPPLRAPQAR 926
>07_01_0166 +
1164903-1165144,1165839-1166074,1166719-1166781,
1166808-1167017,1167098-1167263,1167537-1167780,
1167970-1168362
Length = 517
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 22 SVQNRAADKPRTEERETGADTAPQGKEEDAPGTER 126
S N+ + K T + ++G+ P EDAP T++
Sbjct: 120 SSSNKESMKSTTNKDDSGSSKTPGSNTEDAPSTDK 154
>05_03_0079 +
8212648-8212724,8212844-8212993,8213211-8213351,
8213658-8213820,8213901-8214094,8214174-8214369,
8214462-8214539,8214933-8215162,8215574-8215688,
8215878-8215952,8216032-8216172,8216309-8216512,
8216586-8216747,8216787-8216794,8217099-8217223,
8217316-8217438,8218177-8218307,8218527-8218658
Length = 814
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -2
Query: 248 QFLRLPSPIVPRSIEVSICSTLSSANQ*ISASDQPRRGPWCL 123
QFL+ + IVPRS+ S S+ S+A + + +P G +C+
Sbjct: 407 QFLKYTAGIVPRSVYTSGKSS-SAAGLTATVAKEPETGEFCI 447
>03_02_0842 + 11682332-11683802,11683858-11683940,11684751-11686553,
11687783-11688633,11689230-11689299,11689597-11689641
Length = 1440
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 385 FAMTSHVGYWESEDTMLLMLREIYADM 465
F S GYWE+ + L LRE+Y+++
Sbjct: 1368 FLEASGRGYWETSEENLEKLRELYSEV 1394
>02_03_0220 + 16545571-16545573,16545717-16545818,16545980-16546008,
16549421-16553036
Length = 1249
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 417 LPVSDVAGHGEQVLVDDLEWRLLEHVVDPA-ALIQLAEHLARRIARTVFPFIKQL 256
L SD+ H E++L+D + + + D + ++ E +A + + V P++ Q+
Sbjct: 902 LGASDIDRHQEELLIDGIVYTFQQQTSDDSNVILNGFETVANALGQRVKPYVPQI 956
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,728,934
Number of Sequences: 37544
Number of extensions: 315694
Number of successful extensions: 1104
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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