Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00267
         (609 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    28   0.21 
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    27   0.63 
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    25   1.4  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   1.9  

>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 28.3 bits (60), Expect = 0.21
 Identities = 23/65 (35%), Positives = 29/65 (44%)
 Frame = -1

Query: 534 PVSGVSSSVREALLRDRGVRIDSHIRVDLAQHQQHRVFGLPVSDVAGHGEQVLVDDLEWR 355
           P +G SSS   +LL       D   R+ L++      F  P     GHGE V + D E  
Sbjct: 83  PAAGASSSSSSSLLSSSAE--DDVARITLSKDAD--AFFTPY---IGHGESVRIIDAELG 135

Query: 354 LLEHV 340
            LEHV
Sbjct: 136 TLEHV 140


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 26.6 bits (56), Expect = 0.63
 Identities = 22/65 (33%), Positives = 28/65 (43%)
 Frame = -1

Query: 534 PVSGVSSSVREALLRDRGVRIDSHIRVDLAQHQQHRVFGLPVSDVAGHGEQVLVDDLEWR 355
           P +G SSS   +LL       D   R+ L++      F  P     GHGE   + D E  
Sbjct: 83  PAAGASSSSSSSLLSSSAE--DDVARITLSKDAD--AFFTPY---IGHGESARIIDAELG 135

Query: 354 LLEHV 340
            LEHV
Sbjct: 136 TLEHV 140


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 396 GHGEQVLVDDLEWRLLEHV 340
           GHGE V + D E   LEHV
Sbjct: 8   GHGESVRIIDAELGTLEHV 26


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 253 SQLFDEREDGSSNATREMLGKLNE 324
           ++++DER++ S N  RE  GKL +
Sbjct: 165 TRVYDERKEESMNLLRESEGKLEK 188


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,977
Number of Sequences: 2352
Number of extensions: 10684
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)