Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00267
(609 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49956-8|AAA93436.1| 765|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U49956-7|AAL32232.1| 753|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U49956-6|ABD94087.1| 762|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U49956-5|ABD94086.1| 762|Caenorhabditis elegans Hypothetical pr... 41 8e-04
AF016688-3|AAB66076.2| 674|Caenorhabditis elegans Hypothetical ... 31 0.64
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p... 29 2.0
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 4.5
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 4.5
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 28 4.5
>U49956-8|AAA93436.1| 765|Caenorhabditis elegans Hypothetical
protein M03A1.6a protein.
Length = 765
Score = 40.7 bits (91), Expect = 8e-04
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 2 FHPYDPIAYRIEPLINPGLKNVKP 73
FHPYDP+AYR+EP P ++++P
Sbjct: 531 FHPYDPVAYRLEPFFAPEYRHIRP 554
>U49956-7|AAL32232.1| 753|Caenorhabditis elegans Hypothetical
protein M03A1.6b protein.
Length = 753
Score = 40.7 bits (91), Expect = 8e-04
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 2 FHPYDPIAYRIEPLINPGLKNVKP 73
FHPYDP+AYR+EP P ++++P
Sbjct: 519 FHPYDPVAYRLEPFFAPEYRHIRP 542
>U49956-6|ABD94087.1| 762|Caenorhabditis elegans Hypothetical
protein M03A1.6d protein.
Length = 762
Score = 40.7 bits (91), Expect = 8e-04
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 2 FHPYDPIAYRIEPLINPGLKNVKP 73
FHPYDP+AYR+EP P ++++P
Sbjct: 528 FHPYDPVAYRLEPFFAPEYRHIRP 551
>U49956-5|ABD94086.1| 762|Caenorhabditis elegans Hypothetical
protein M03A1.6c protein.
Length = 762
Score = 40.7 bits (91), Expect = 8e-04
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 2 FHPYDPIAYRIEPLINPGLKNVKP 73
FHPYDP+AYR+EP P ++++P
Sbjct: 528 FHPYDPVAYRLEPFFAPEYRHIRP 551
>AF016688-3|AAB66076.2| 674|Caenorhabditis elegans Hypothetical
protein F18A12.4 protein.
Length = 674
Score = 31.1 bits (67), Expect = 0.64
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +1
Query: 259 LFDEREDGSSNATREMLGKLNEGRRIDYVLQEAPLEVINEYLFA-MTSHVGYWESEDTML 435
L D+ DGS EML L + + L + ++ E F + +G TM+
Sbjct: 155 LLDKNWDGSKFDLNEMLSNLVKLGATNLGLFQLDFRILTEGKFVRIAPTLGSIVHNSTMI 214
Query: 436 LMLREIYADMGVDPDS 483
M+ EI GV PDS
Sbjct: 215 SMISEILEANGVQPDS 230
>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 2 FHPYDPIAYRIEPLINPGLKNVKPEQIPHHK 94
++P DP RIEP+++ L V P +P ++
Sbjct: 606 YYPLDPCGARIEPVLDGQLSCVPPYNVPKYQ 636
>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 2 FHPYDPIAYRIEPLINPGLKNVKPEQIPHHK 94
++P DP RIEP+++ L V P +P ++
Sbjct: 606 YYPLDPCGARIEPVLDGQLSCVPPYNVPKYQ 636
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +1
Query: 34 RAADKPRTEERETGADTAPQGKEEDAPGTERHHGPRRG*SEAEIH*FAE 180
R D EE + G+EE+ P ER H RG + E AE
Sbjct: 199 RRGDSYEDEEEDRKKYRPRHGEEEEEPSREREHHHHRGEEKPETENIAE 247
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 13 RSDSVQNRAADKPRTEERETGADTAPQGKE 102
+S S AADK TE+ ETG +T + K+
Sbjct: 15152 KSTSADLEAADKAETEKSETGKETTEKKKK 15181
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 13 RSDSVQNRAADKPRTEERETGADTAPQGKE 102
+S S AADK TE+ ETG +T + K+
Sbjct: 15152 KSTSADLEAADKAETEKSETGKETTEKKKK 15181
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 4 PSLRSDSVQNRAADKPRTEERETGADTAPQGKEED 108
P RSD VQN D E +T +T G+EED
Sbjct: 471 PPFRSDEVQNEIEDAKEKVEEDTEEET---GREED 502
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,632,146
Number of Sequences: 27780
Number of extensions: 248119
Number of successful extensions: 967
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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