Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00265X
(537 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep: S... 52 1e-05
UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protei... 48 1e-04
UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n... 48 2e-04
UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37; Eukary... 45 0.001
UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4; Magnoli... 44 0.002
UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=... 42 0.007
UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2; Tr... 42 0.007
UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|R... 42 0.012
UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30; Eukary... 40 0.027
UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, wh... 39 0.084
UniRef50_UPI0001509BA5 Cluster: Ribosomal protein S30 containing... 38 0.15
UniRef50_UPI00004990C9 Cluster: 40S ribosomal protein S30; n=2; ... 35 1.4
UniRef50_A0RV16 Cluster: Ribosomal protein S30E; n=2; Thermoprot... 34 1.8
UniRef50_Q3LW43 Cluster: Ribosomal protein S30; n=1; Bigelowiell... 33 3.1
UniRef50_Q8ZV51 Cluster: Ribosomal protein S30; n=11; Thermoprot... 32 7.3
UniRef50_UPI0000E11517 Cluster: hypothetical protein OM2255_1381... 32 9.6
UniRef50_Q7XUY7 Cluster: OSJNBb0048E02.10 protein; n=3; Oryza sa... 32 9.6
>UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep:
S30-ubiquitin-like - Suberites domuncula (Sponge)
Length = 134
Score = 51.6 bits (118), Expect = 1e-05
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = -3
Query: 247 QESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXXXXXLT--VPLLGGKVHG 74
+ + Q+K + + ED LS G P L+ V ++GGKVHG
Sbjct: 18 ETTFNQLKSELVLSEGITVEDQVLSYGGVPLEDDTLVCEIVPELATLSLAVRVVGGKVHG 77
Query: 73 SLARAGKVKGQTPKVE 26
SLARAGKV+GQTPKVE
Sbjct: 78 SLARAGKVRGQTPKVE 93
>UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protein
30; n=3; Caenorhabditis|Rep: Ribosomal protein, small
subunit protein 30 - Caenorhabditis elegans
Length = 130
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = -3
Query: 97 LLGGKVHGSLARAGKVKGQTPKVE 26
LLGGKVHGSLARAGKV+ QTPKV+
Sbjct: 68 LLGGKVHGSLARAGKVRAQTPKVD 91
>UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n=3;
Laurasiatheria|Rep: UPI0000F33F66 UniRef100 entry - Bos
Taurus
Length = 128
Score = 47.6 bits (108), Expect = 2e-04
Identities = 31/78 (39%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = -3
Query: 250 GQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXXXXXLTVP---LLGGKV 80
GQE + QIK + +L +D L L G P +LGGKV
Sbjct: 17 GQEMVAQIKAHVASLEG---KDQVLLLAGTPLEDEVTLGQCEVEALSTLEVVGRMLGGKV 73
Query: 79 HGSLARAGKVKGQTPKVE 26
HGSL AGKV+GQTPKV+
Sbjct: 74 HGSLDCAGKVRGQTPKVD 91
>UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37;
Eukaryota|Rep: 40S ribosomal protein S30 -
Schizosaccharomyces pombe (Fission yeast)
Length = 61
Score = 44.8 bits (101), Expect = 0.001
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = -3
Query: 88 GKVHGSLARAGKVKGQTPKVE 26
GKVHGSLARAGKVK QTPKVE
Sbjct: 2 GKVHGSLARAGKVKSQTPKVE 22
>UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4;
Magnoliophyta|Rep: 40S ribosomal protein S30 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 62
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -3
Query: 88 GKVHGSLARAGKVKGQTPKV 29
GKVHGSLARAGKV+GQTPKV
Sbjct: 2 GKVHGSLARAGKVRGQTPKV 21
>UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative;
n=4; Leishmania|Rep: 40S ribosomal protein S30,
putative - Leishmania major
Length = 66
Score = 42.3 bits (95), Expect = 0.007
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -3
Query: 88 GKVHGSLARAGKVKGQTPKV 29
GK+HGSLARAGKVK QTPKV
Sbjct: 2 GKIHGSLARAGKVKNQTPKV 21
>UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2;
Trichocomaceae|Rep: Ribosomal S30/ubiquitin fusion -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
NRRL 181)(Aspergillus fischerianus (strain ATCC 1020 /
DSM 3700 / NRRL 181))
Length = 78
Score = 42.3 bits (95), Expect = 0.007
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -3
Query: 88 GKVHGSLARAGKVKGQTPKVE 26
GKVHGSLARAGKVK TPKVE
Sbjct: 2 GKVHGSLARAGKVKSATPKVE 22
>UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74;
root|Rep: 40S ribosomal protein S30 - Homo sapiens
(Human)
Length = 59
Score = 41.5 bits (93), Expect = 0.012
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -3
Query: 85 KVHGSLARAGKVKGQTPKV 29
KVHGSLARAGKV+GQTPKV
Sbjct: 1 KVHGSLARAGKVRGQTPKV 19
>UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30;
Eukaryota|Rep: 40S ribosomal protein S30 - Oryzias
latipes (Medaka fish) (Japanese ricefish)
Length = 59
Score = 40.3 bits (90), Expect = 0.027
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = -3
Query: 85 KVHGSLARAGKVKGQTPKVE 26
KVHGSLARAGKV+GQTP V+
Sbjct: 1 KVHGSLARAGKVRGQTPNVD 20
>UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22,
whole genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_22,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 92
Score = 38.7 bits (86), Expect = 0.084
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = -3
Query: 88 GKVHGSLARAGKVKGQTPKVE 26
GK+HG+LA+AGKV+ QTPK+E
Sbjct: 2 GKLHGTLAKAGKVRKQTPKIE 22
>UniRef50_UPI0001509BA5 Cluster: Ribosomal protein S30 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S30 containing protein - Tetrahymena
thermophila SB210
Length = 80
Score = 37.9 bits (84), Expect = 0.15
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = -3
Query: 88 GKVHGSLARAGKVKGQTPKVE 26
G++HG+LA+AGKV+ QTPKVE
Sbjct: 2 GRMHGTLAKAGKVRKQTPKVE 22
>UniRef50_UPI00004990C9 Cluster: 40S ribosomal protein S30; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S30 - Entamoeba histolytica HM-1:IMSS
Length = 64
Score = 34.7 bits (76), Expect = 1.4
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 88 GKVHGSLARAGKVKGQTPKVE 26
GKVHG L RAGKV+ QT K E
Sbjct: 2 GKVHGGLTRAGKVRNQTKKPE 22
>UniRef50_A0RV16 Cluster: Ribosomal protein S30E; n=2;
Thermoprotei|Rep: Ribosomal protein S30E - Cenarchaeum
symbiosum
Length = 60
Score = 34.3 bits (75), Expect = 1.8
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -3
Query: 79 HGSLARAGKVKGQTPKVE 26
HGSL +AGKV+ QTPK+E
Sbjct: 4 HGSLTKAGKVRSQTPKIE 21
>UniRef50_Q3LW43 Cluster: Ribosomal protein S30; n=1; Bigelowiella
natans|Rep: Ribosomal protein S30 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 55
Score = 33.5 bits (73), Expect = 3.1
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -3
Query: 88 GKVHGSLARAGKVKGQT 38
GKVHGSL RAGKV+ QT
Sbjct: 2 GKVHGSLTRAGKVRNQT 18
>UniRef50_Q8ZV51 Cluster: Ribosomal protein S30; n=11;
Thermoprotei|Rep: Ribosomal protein S30 - Pyrobaculum
aerophilum
Length = 55
Score = 32.3 bits (70), Expect = 7.3
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -3
Query: 79 HGSLARAGKVKGQTPKV 29
HGSL +AGKV+ QTPK+
Sbjct: 4 HGSLTKAGKVRNQTPKI 20
>UniRef50_UPI0000E11517 Cluster: hypothetical protein OM2255_13813;
n=1; alpha proteobacterium HTCC2255|Rep: hypothetical
protein OM2255_13813 - alpha proteobacterium HTCC2255
Length = 218
Score = 31.9 bits (69), Expect = 9.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 308 DFTICSCISEGNRHTSWTQWPGVHWSDQGTHSYSC 204
D T CS G+R+T WP HW ++SC
Sbjct: 170 DLTACSA---GSRYTIMLSWPAAHWQHPTITNHSC 201
>UniRef50_Q7XUY7 Cluster: OSJNBb0048E02.10 protein; n=3; Oryza
sativa|Rep: OSJNBb0048E02.10 protein - Oryza sativa
subsp. japonica (Rice)
Length = 423
Score = 31.9 bits (69), Expect = 9.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 248 PGVHWSDQGTHSYSCCSW**RPYSIIMWS 162
PG+HW++Q YS CS P I MW+
Sbjct: 378 PGIHWNNQWMRGYSDCSHWCLPGPIDMWN 406
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 406,595,120
Number of Sequences: 1657284
Number of extensions: 6588249
Number of successful extensions: 13006
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13005
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34156095254
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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