Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00265X
         (537 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   3.7  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   8.6  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   8.6  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   8.6  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   8.6  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    23   8.6  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = -3

Query: 322 SRVDKILQYAVAYQRAIDTRPGRNGQESIGQIKERIRTLAAVGDEDLTLSLCGA 161
           S+VD  L+ AV Y R++      NG E     +++  T A+  ++    SLC A
Sbjct: 148 SKVDT-LRLAVEYIRSLQRMLDENGGELPSNKQQQQLTSASSSNQLSNSSLCSA 200


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = -3

Query: 304 LQYAVAYQRAIDTRPGRNGQESIGQIKERIRTLAAVGDE 188
           L Y    QR  D+RP  N +E +            +GDE
Sbjct: 167 LNYNENLQRFFDSRPAMNIEEQMKMDSSGGTNTETIGDE 205


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = -3

Query: 304 LQYAVAYQRAIDTRPGRNGQESIGQIKERIRTLAAVGDE 188
           L Y    QR  D+RP  N +E +            +GDE
Sbjct: 167 LNYNENLQRFFDSRPAMNIEEQMKMDSSGGTNTETIGDE 205


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = -3

Query: 304 LQYAVAYQRAIDTRPGRNGQESIGQIKERIRTLAAVGDE 188
           L Y    QR  D+RP  N +E +            +GDE
Sbjct: 167 LNYNENLQRFFDSRPAMNIEEQMKMDSSGGTNTETIGDE 205


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = -3

Query: 304 LQYAVAYQRAIDTRPGRNGQESIGQIKERIRTLAAVGDE 188
           L Y    QR  D+RP  N +E +            +GDE
Sbjct: 167 LNYNENLQRFFDSRPAMNIEEQMKMDSSGGTNTETIGDE 205


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 239 HWSDQGTHSYSC 204
           HW++QGT + +C
Sbjct: 265 HWAEQGTSNNAC 276


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,556
Number of Sequences: 2352
Number of extensions: 7030
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)