Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00264
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   2.8  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   2.8  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.9  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   4.9  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.6  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 70  CSINYTCTTAGNDLKS 23
           CS+ YTC + G+ L S
Sbjct: 455 CSVYYTCVSDGSKLVS 470


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 166 NNGAHKTTLYTIRLNHNKSTLTLFRHHEILLTCSI 62
           NNG +K  L  + + HN+  +T   H+EI    S+
Sbjct: 209 NNGHYKNFLSQVEIIHNEILVT---HNEIQTIFSV 240


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 166 NNGAHKTTLYTIRLNHNKSTLTLFRHHEILLTCSI 62
           NNG +K  L  + + HN+  +T   H+EI    S+
Sbjct: 34  NNGHYKNFLSQVEIIHNEILVT---HNEIQTIFSV 65


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 612 FNHRMFNINYENKTKYTD*NKF 547
           FN   FN NY+    Y++ N +
Sbjct: 206 FNDPQFNFNYQYNQAYSNYNNY 227


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 612 FNHRMFNINYENKTKYTD*NKF 547
           FN   FN NY+    Y++ N +
Sbjct: 226 FNDPQFNFNYQYNQAYSNYNNY 247


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 333 KALPYHRDHRS*THVLY 283
           K +P H D R  THV+Y
Sbjct: 655 KFVPEHIDQRLCTHVVY 671


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +3

Query: 216 GHQKNFSSNTTAIGIPAFLPWSSKVH 293
           G   N S ++ +   P   PW  +VH
Sbjct: 183 GTNNNNSKSSQSSNPPQIYPWMKRVH 208


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +2

Query: 116 IMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWP 220
           I   P+ ++  L+ +  E FEK GF  + + + +P
Sbjct: 115 IAASPE-LRANLIASSFEYFEKYGFNGLDIDWEYP 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,494
Number of Sequences: 336
Number of extensions: 3405
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)