Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00263
(734 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_18957| Best HMM Match : zf-TAZ (HMM E-Value=3.7) 33 0.24
SB_2042| Best HMM Match : Amidase (HMM E-Value=0) 33 0.32
SB_1070| Best HMM Match : NOA36 (HMM E-Value=0.012) 33 0.32
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_11157| Best HMM Match : NUC173 (HMM E-Value=9.2e-39) 31 0.97
SB_8293| Best HMM Match : zf-C2H2 (HMM E-Value=0.32) 31 0.97
SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 31 1.3
SB_18954| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.0015) 31 1.3
SB_10862| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0) 31 1.3
SB_56313| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-14) 30 1.7
SB_46841| Best HMM Match : zf-AN1 (HMM E-Value=2.4) 30 1.7
SB_40032| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_31271| Best HMM Match : Extensin_2 (HMM E-Value=5.7) 30 1.7
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 30 1.7
SB_22241| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_20409| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_7007| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_52207| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 29 3.9
SB_37204| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-25) 29 3.9
SB_37102| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.9
SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022) 29 3.9
SB_31403| Best HMM Match : PAN (HMM E-Value=2.7e-18) 29 3.9
SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19) 29 3.9
SB_41710| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_29430| Best HMM Match : AhpC-TSA (HMM E-Value=0.00012) 29 5.2
SB_46754| Best HMM Match : zf-C2H2 (HMM E-Value=1.5e-29) 29 5.2
SB_42606| Best HMM Match : Ank (HMM E-Value=3.4e-08) 29 5.2
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 29 5.2
SB_10433| Best HMM Match : Keratin_B2 (HMM E-Value=4.4) 29 5.2
SB_9151| Best HMM Match : WAP (HMM E-Value=0.045) 29 5.2
SB_56447| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_54230| Best HMM Match : EGF (HMM E-Value=0) 28 6.8
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 28 6.8
SB_4758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_45619| Best HMM Match : M (HMM E-Value=0.01) 25 7.1
SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008) 28 9.0
SB_41963| Best HMM Match : Metallothio (HMM E-Value=3.7) 28 9.0
SB_32609| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 9.0
SB_20268| Best HMM Match : zf-C2H2 (HMM E-Value=2.7) 28 9.0
>SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1726
Score = 34.3 bits (75), Expect = 0.10
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Frame = +1
Query: 268 FCQAVQRLPTCAHCGKVKCMLKSGD-CVIRHPGVYNTGMGMV-----GAICDFCEAWVC- 426
FC + R+ C+H V C + G C + H V + G+V G +C VC
Sbjct: 483 FCSSWYRV-MCSHA--VVCSVAHGAVCSVAHAVVCSVAHGVVCSVAHGVVCSVAHVVVCS 539
Query: 427 --HGRKCLTSHACTCPLMDAVCLECERGV 507
HG C SH C + V GV
Sbjct: 540 VAHGVVCSVSHGVVCSVAHGVVCSVAHGV 568
>SB_18957| Best HMM Match : zf-TAZ (HMM E-Value=3.7)
Length = 117
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 295 TCAHCGKVKCMLKSGD-CVIRHPGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTC 465
T AH G+ C++ G CVI H G +G I + + +G +C+T++ C C
Sbjct: 56 TVAHGGQ--CVIVHGSQCVIAHGGQCAITLGGQCMIAHGGQCMIAYGGQCVTAYGCQC 111
>SB_2042| Best HMM Match : Amidase (HMM E-Value=0)
Length = 796
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 444 HIPCVHLPS-HGCRVLGVRKRCMEHGGRVFRCCFCQGFLCEDDQF 575
+IP +P +G R+L V R ++ GGR+ C+ F C D+ F
Sbjct: 68 NIPVAGIPMMNGSRILEVT-RVLDAGGRILGKSVCEDFCCSDESF 111
>SB_1070| Best HMM Match : NOA36 (HMM E-Value=0.012)
Length = 148
Score = 32.7 bits (71), Expect = 0.32
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 672 CFCEEHVRRRGVRSADGE 725
CFCE+HVRR+GV+ G+
Sbjct: 13 CFCEDHVRRKGVKYTRGQ 30
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 31.1 bits (67), Expect = 0.97
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Frame = +1
Query: 307 CGKVKCMLKSGDCV--IRHPGVYNTGM--GMVGAICDFC-EAWVC-HGRKC-LTSHACTC 465
C C +G+C + PG Y+ G G C+ ++ C +G C TS +CTC
Sbjct: 492 CSSSPCN-NNGNCTNKVAIPGDYSCACHTGFTGKDCEIVKDSCGCQNGGTCNSTSRSCTC 550
Query: 466 PLM--DAVC-LECERGVWST--VAGFSGAVSAKD 552
P M ++C + CE ++ + SG+++AKD
Sbjct: 551 PAMFTGSICEIVCETQKFNLAFLVDGSGSINAKD 584
>SB_11157| Best HMM Match : NUC173 (HMM E-Value=9.2e-39)
Length = 1060
Score = 31.1 bits (67), Expect = 0.97
Identities = 24/75 (32%), Positives = 30/75 (40%)
Frame = -3
Query: 609 PIPKLDMRPDAQTGHLHTKILGRNSTGKPGHRAPYTSFALQAHGIHERAGARMGCETFST 430
PI + + A T LH K+L ++ P AP TS Q H + C
Sbjct: 689 PIASVHPKLLALTTSLHPKLLAHITSVHPKLLAPITSSTPQTTSTHHITTPQTTC----- 743
Query: 429 MTHPCLTEVTYSTHH 385
TH T T STHH
Sbjct: 744 -THHLTTPETTSTHH 757
>SB_8293| Best HMM Match : zf-C2H2 (HMM E-Value=0.32)
Length = 316
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 471 HGCRVLGVRK---RCMEHGGRVFRCCFC-QGFLCEDDQFEHQASC 593
H C + + + R +H GR+F C FC GF+ +D +HQ C
Sbjct: 147 HYCLIRNLNRFLSRQTKHKGRMFYCLFCLHGFVRQDLLDDHQLLC 191
>SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = -1
Query: 569 VIFTQKSLAETAPENPATVLHTPLSHSKHTASMRGQVHAWDVRHFLP*HTHASQKSHIAP 390
++ T + T P + + LH L++ + ++G V W++R + H+ AP
Sbjct: 197 LLSTALPILRTPPPSWSIRLHPSLTNERGIKDLKGTVMPWELRTVVLPTMHSELLHDSAP 256
Query: 389 TIP 381
TIP
Sbjct: 257 TIP 259
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 444 HIPCVHLPSHGCRVLGVRKRCMEHGGR 524
H C LP +GC+V+ VRK ++ GR
Sbjct: 1886 HQLCTELPVYGCKVIAVRKGTLDLHGR 1912
>SB_18954| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.0015)
Length = 921
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 28 CMFFDDFERRIQLCTLLHL*IKQEHAKEK-DRST*KSRETEVAPERNTGRSRTCRFSSTS 204
C DF R LC + L ++E + K ++ K E RN G R C+ T
Sbjct: 307 CFNCKDFFRAGHLCHMQKLETEEEKRERKREKKRRKRAEKRAKRRRNVGTGRRCKACITV 366
Query: 205 L*RCYGVRQMSEKTEDTAFCYFCQAVQRLPTCAHCGKVK 321
+ Y R+ + C+ C+ R H K++
Sbjct: 367 --QAYRYRRPRDHKCGEVHCFNCKDFFRAGHLCHMQKLE 403
>SB_10862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +3
Query: 540 FCQGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLRCKTCFCEE 686
FC F C D + + C S RI C RC++ FC++
Sbjct: 35 FCGRFFCSDCGYRCERCKDSNPRSVQLCDSHARIAYPRCTRCESRFCDD 83
>SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 587
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 582 QASCQVLESETYKCQSCNRIGQYSCLRCKTCFC 680
Q C+ + E KC C R+G Y RCK C C
Sbjct: 450 QCQCR-MNFEGLKCDQC-RVGYYDFPRCKQCGC 480
>SB_56313| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-14)
Length = 910
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 471 HGCRVLGVRK---RCMEHGGRVFRCCFC-QGFLCEDDQFEHQASC 593
H C + + + R +H GR+F C FC GF+ +D +HQ C
Sbjct: 215 HYCLIRNLNRFLSRQTKHKGRMFYCPFCLHGFVRQDLLDDHQLLC 259
>SB_46841| Best HMM Match : zf-AN1 (HMM E-Value=2.4)
Length = 266
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +2
Query: 182 HVDLAQHPCNVAMECDKCQKKQKTLHFATSVKLYRDSQHVLTVGKSNAC*SLEIVLLDIQ 361
+V ++ H CNV M D+C ++H + R+ ++++ S +I L+ +
Sbjct: 151 NVLMSMHECNVLMSIDECNVLM-SIHECNVLMSIRECNVLMSIPVRRCYTSNQITLIVVT 209
Query: 362 VFTTREWEWWVLYVTS 409
EW+ +V S
Sbjct: 210 AMLAFGLEWYFSHVVS 225
>SB_40032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +2
Query: 182 HVDLAQHPCNVAMECDKCQKKQKTLHFATSVKLYRDSQHVLTVGKSNAC*SLEIVLLDIQ 361
+V ++ H CNV M D+C ++H + R+ ++++ S +I L+ +
Sbjct: 223 NVLMSMHECNVLMSIDECNVLM-SIHECNVLMSIRECNVLMSIPVRRCYTSNQITLIVVT 281
Query: 362 VFTTREWEWWVLYVTS 409
EW+ +V S
Sbjct: 282 AMLAFGLEWYFSHVVS 297
>SB_31271| Best HMM Match : Extensin_2 (HMM E-Value=5.7)
Length = 323
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/74 (22%), Positives = 35/74 (47%)
Frame = -3
Query: 483 HGIHERAGARMGCETFSTMTHPCLTEVTYSTHHSHSRVVNTWMSNNTISRL*HAFDFPTV 304
H + + A T++T + TY+T +R V+T+ +++ +R H ++ +
Sbjct: 240 HTYNTTSQATRYVHTYNTTSQATRYVHTYNTTSQANRYVHTYNTSSQATRYVHTYNTTSQ 299
Query: 303 STCWESLYSLTEVA 262
+TC Y+ T A
Sbjct: 300 ATCHVHTYNTTSQA 313
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 9/72 (12%)
Frame = +1
Query: 337 GDCVIRHPGVYNTGMGMVGAICDFCEAWVC---------HGRKCLTSHACTCPLMDAVCL 489
G CV+ G Y G G+ G D W C G KC + CP A +
Sbjct: 2049 GACVLCTGGKYCEGHGLSGPTADCMGGWYCVNGSSKATPDGAKCQPGY--YCPNGSANPI 2106
Query: 490 ECERGVWSTVAG 525
+C+RG + G
Sbjct: 2107 QCDRGKYCPTEG 2118
>SB_22241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 301 AHCGKVKCMLK-SGDCVIRHPGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTC 465
AH G+ C++ G CVI H G T G I C+ + +G +C+T + C
Sbjct: 370 AHGGQ--CVITHGGQCVIDHGGKCVTVYGGQCVITHGCQCVIVYGGQCVTVYGGQC 423
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +1
Query: 301 AHCGKVKCMLKSGDCVIRHPGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDA 480
AH G+ ++ G CVI H G G I + + HG KC+T + C +
Sbjct: 346 AHGGQC-VIVHVGQCVIVHVGQCEVAHGGQCVITHGGQCVIDHGGKCVTVYGGQCVITHG 404
Query: 481 V-CLECERGVWSTVAGFSGAVSAKDFCV 561
C+ G TV G ++ CV
Sbjct: 405 CQCVIVYGGQCVTVYGGQCVIAHGGQCV 432
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +1
Query: 313 KVKCMLK-SGDCVIRHPGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTC 465
K C++ G CVI H G G I + + HG +C+ SH C
Sbjct: 188 KQDCVIAYGGQCVISHGGQCVISHGGQCVIAHGGQCVISHGGQCVISHGGQC 239
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +1
Query: 322 CMLKSGDCVIRHPGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTC 465
C LK DCVI + G G I + + HG +C+ SH C
Sbjct: 185 CSLKQ-DCVIAYGGQCVISHGGQCVISHGGQCVIAHGGQCVISHGGQC 231
>SB_20409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -2
Query: 283 VQLDRSSKMQCLLFFLTFVALHSNVTGM 200
V+LD +SK+ CLL+ V L +VTG+
Sbjct: 27 VKLDNTSKLNCLLYADDLVILSDSVTGL 54
>SB_7007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 510 EHGGRVFRCC---FCQGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLRCKTC 674
E G + RC +C +D+Q+ H+ C + + Y C C++ G + +C C
Sbjct: 16 EGGPKCLRCNIAEYCSAQCRDDNQWRHKVDCDNVSRQLY-CHKCSQKGG-NMKQCSNC 71
>SB_52207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 501 RCMEHGGRVFRCCFC-QGFLCEDDQFEHQASC 593
R +H GR+F C FC GFL +D +H C
Sbjct: 106 RQTKHKGRMFYCPFCLHGFLRQDLLDDHHLLC 137
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 519 GRVFRCCFCQGFLCEDDQFEHQASCQVLESE 611
G V C FC+ D +HQ+ CQ L +E
Sbjct: 845 GTVLPCEFCEVLFPAADLIQHQSGCQPLNNE 875
>SB_37204| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-25)
Length = 455
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +2
Query: 128 KKAEKQKLRQKEIRAAREHVDLAQHPCNVAMECDKC 235
+KA+++K R + + HV ++H C++ +C C
Sbjct: 183 EKAKRKKQRVNKCKKCGVHVSGSKHSCSMPFQCKDC 218
>SB_37102| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 618
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 510 EHGGRVFRCCFC-QGFLCEDDQFEHQASCQVLESETYKCQSCNR 638
EHG + FRC C F D H S+ YKC+ C+R
Sbjct: 334 EHGEKPFRCTQCVMSFTRPSDLQRHLLIHS--NSKPYKCEECDR 375
>SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022)
Length = 229
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +3
Query: 534 CCFCQGFLCEDDQFE--HQASCQVLESETYKCQSCNRIGQYSCLRCKTC 674
C C+ L D + ++ ++ES+ YKC+ C + QY R C
Sbjct: 167 CPVCKTILSSGDDIKKFNRTLLGLIESQIYKCKGCGKEVQYQHCREHEC 215
>SB_31403| Best HMM Match : PAN (HMM E-Value=2.7e-18)
Length = 1051
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 507 MEHGGRVFRCCFCQGFLCEDDQFEHQASCQVLESETYKCQ-SCNR 638
M GG+ +RC C GF + H + + + C+ +CNR
Sbjct: 532 MREGGKAYRCDVCDGFFELPNSMLHGHVIETITTTKKVCRMTCNR 576
>SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19)
Length = 261
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 400 CDFCEAWVCHGRKCLTSHACTCPLMDAV 483
C +C W HG K L +C P + A+
Sbjct: 27 CAYCHEWDYHGDKTLFEASCNYPTLTAI 54
>SB_41710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 534 CCFCQGFLCEDDQFEHQASCQVLESETYKCQSCNR 638
C FC+ + ++ EH+ C S T KC SCN+
Sbjct: 82 CAFCELSMNRNELEEHEDFCG---SRTEKCASCNK 113
>SB_29430| Best HMM Match : AhpC-TSA (HMM E-Value=0.00012)
Length = 704
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +1
Query: 250 DTAFCYFCQAVQRLPTCAHCGKVKCMLKSGDCVIRHPGVYNTGMGMVGAICDFCEAWV 423
DT + +++ R CG+ K + + + PG Y TG + ++C F E V
Sbjct: 491 DTGYIPLPRSLTRYARSFDCGERKWLTNGAEISWKMPGRYLTGKNGLRSVCTFGERLV 548
>SB_46754| Best HMM Match : zf-C2H2 (HMM E-Value=1.5e-29)
Length = 487
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 61 QLCTLLHL*IKQEHAKEKDRST*KSRETEVAPERNTGRSRTCRFS 195
++C LHL ++E ++K K RE ++A E+ + +SR R S
Sbjct: 180 KICLTLHLPCREEELRKKREEARKRREEKLA-EKESSKSRNKRKS 223
>SB_42606| Best HMM Match : Ank (HMM E-Value=3.4e-08)
Length = 551
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 KNMPKKKTGQRK-KAEKQKLRQKEIRAAREHVDLAQHPCNVAMECDKCQKKQKTLHFATS 271
+ + KKKT K KAE ++L+QK + R+ L+ EC + QKK LH+ S
Sbjct: 480 REIEKKKTEIEKIKAELEELQQKTVTLNRKRKSLSS-------ECSQLQKK---LHYCDS 529
Query: 272 V 274
V
Sbjct: 530 V 530
>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 306
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Frame = +3
Query: 456 VHLPS--HGCRVL----GVRKRCMEHGGRVFRCCFCQGFLCEDDQFEHQASCQVL 602
VH P+ +GC+++ GV +CC C FL + EH +C V+
Sbjct: 87 VHCPNADNGCKLVLKLEGVEGHLKSCSHAPVQCCGCSAFLKRGELAEHHNTCAVI 141
>SB_10433| Best HMM Match : Keratin_B2 (HMM E-Value=4.4)
Length = 212
Score = 28.7 bits (61), Expect = 5.2
Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = -3
Query: 573 TGHLHTKILGRNSTGKPGHRAPYTSFALQ-AHGIHERAGARMGCETFSTMTHPCLTEVTY 397
T ++HT +T + H TS A++ H + + A T+ T + TY
Sbjct: 108 TRYVHTYNTTSQAT-RYVHTYNTTSQAIRYVHTYNTTSQATRCVHTYDTTSQATRCVHTY 166
Query: 396 STHHSHSRVVNTWMSNNTISRL*HAFDFPTVSTCWESLYSLT 271
T +R V+T+ + + +R + ++ ++S C+ Y+ T
Sbjct: 167 DTTSLATRCVHTYNTTSQATRYVYTYNTTSLSICYVHTYNTT 208
>SB_9151| Best HMM Match : WAP (HMM E-Value=0.045)
Length = 1865
Score = 28.7 bits (61), Expect = 5.2
Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 16/82 (19%)
Frame = +1
Query: 298 CAHCGKVKCMLKSGDCVIRHPG---VYNTGMGMVGAICDFCE------AWV------C-H 429
C H C L G C+I H G + T + G C +C+ +W C
Sbjct: 129 CEHHDGFGCPLNPGYCIIEHEGQRTCFATKQFLPGNPCQWCDPSVSTSSWTSRDGVPCDD 188
Query: 430 GRKCLTSHACTCPLMDAVCLEC 495
G KC + CT L + L C
Sbjct: 189 GNKCTAADTCTRGLCTSKPLTC 210
>SB_56447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 283 VQLDRSSKMQCLLFFLTFVALHSNVTGM 200
V+LD +SK+ CLL+ V L + TG+
Sbjct: 30 VKLDNTSKLNCLLYADDLVILSDSATGL 57
>SB_54230| Best HMM Match : EGF (HMM E-Value=0)
Length = 1359
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Frame = +3
Query: 504 CMEHGGRVFRCCFCQGFL---CEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLRCKTC 674
C+ G + C GF CE D E C+V N IG Y C C C
Sbjct: 853 CLNLPG-AYTCTCASGFTGKHCEKDIDE----CKVQNPCRNGATCINSIGDYRCSCCPPC 907
Query: 675 FCEEHVRR 698
F +H +
Sbjct: 908 FTGQHCEK 915
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 730 GGS-PSADRTPRRRTCSSQKHVLQRRHEYCPMRLH 629
GGS S T RR+ + HV+ R Y P R H
Sbjct: 397 GGSVESVPLTTRRKRVTKNNHVIDRAKHYTPTRSH 431
>SB_4758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 513 HGGRVFRCCFCQGFLCEDDQFEHQASCQVLESETYKCQSCNR 638
HG + F+C C+ L D F+ E E YKC C R
Sbjct: 518 HGNQSFQCEKCEQSLNRKDTFKRHMKKYNQEKE-YKCLHCAR 558
>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
Length = 1315
Score = 25.0 bits (52), Expect(2) = 7.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 534 CCFCQGFLCEDDQFE 578
CC C G C+DD ++
Sbjct: 782 CCCCGGVCCDDDIYD 796
Score = 21.4 bits (43), Expect(2) = 7.1
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 525 VFRCCFCQGFLC 560
VF CC C G C
Sbjct: 771 VFGCCCCGGVSC 782
>SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008)
Length = 832
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 9/65 (13%)
Frame = +1
Query: 298 CAHCGKVKCMLKSG-DCVIRHPG---VYNTGMGMV--GAICDFCEAWVC---HGRKCLTS 450
C +CM+ +G C+I H G + N G ++ G C C HG +C+ +
Sbjct: 9 CVVANGGQCMIANGGQCMIAHDGQRIITNGGQCVIAHGGQCVIAHGGQCMIAHGGQCMIA 68
Query: 451 HACTC 465
H C
Sbjct: 69 HVGQC 73
>SB_41963| Best HMM Match : Metallothio (HMM E-Value=3.7)
Length = 167
Score = 27.9 bits (59), Expect = 9.0
Identities = 24/85 (28%), Positives = 31/85 (36%), Gaps = 2/85 (2%)
Frame = +1
Query: 298 CAHCGKVKCMLKSGD-CVIRHPGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTCPLM 474
CA KC + G C I H G AI + + + HG KC H C +
Sbjct: 62 CAIVHGTKCAIVHGTKCAIVHGTKCAIVHGTQCAIVCWTKCAIVHGTKCAIVHGTKCAI- 120
Query: 475 DAVC-LECERGVWSTVAGFSGAVSA 546
VC +C W+ A G A
Sbjct: 121 --VCWTKCAIVCWTKCAIVHGTKCA 143
>SB_32609| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1741
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 510 EHGGRVFRCCFCQ-GFLCEDDQFEHQASCQ 596
E+G R +RCC+C GF + H C+
Sbjct: 261 EYGKRPYRCCYCDYGFQYPNRCLRHLTVCE 290
>SB_20268| Best HMM Match : zf-C2H2 (HMM E-Value=2.7)
Length = 124
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 510 EHGGRVFRCCFCQ-GFLCEDDQFEHQASCQ 596
E+G R +RCC+C GF + H C+
Sbjct: 86 EYGKRPYRCCYCDYGFQYPNRCLRHLTVCE 115
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,852,151
Number of Sequences: 59808
Number of extensions: 645682
Number of successful extensions: 2716
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 2151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2665
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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