Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00263
(734 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 24 1.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 24 1.7
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 24 1.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 24 1.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 24 1.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 24 1.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 24 1.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 1.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 24 1.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 24 1.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 24 1.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 24 1.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 1.7
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 24 1.7
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 24 1.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 24 1.7
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 3.0
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 3.0
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 3.0
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 3.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 3.0
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 3.0
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 3.0
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 3.0
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 23 3.9
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 3.9
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 23 3.9
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 22 5.2
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 22 6.9
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 6.9
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 22 6.9
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 526 FSGAVSAKDFCVKMTSLSIRPHVKFWNRKPTSVNHVT 636
F G + + +KM RP F+N K + V+ +T
Sbjct: 100 FLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTIT 136
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK VN+KK N S KKY +N
Sbjct: 171 VLTKINKIEEHDTVLVVNIKKSGNES---KKYATSSN 204
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK VN+KK N S KKY +N
Sbjct: 182 VLTKINKIEEHDTVLVVNIKKSGNES---KKYATSSN 215
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK VN+KK N S KKY +N
Sbjct: 171 VLTKINKIEEHDTVLVVNIKKSGNES---KKYATSSN 204
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK VN+KK N S KKY +N
Sbjct: 182 VLTKINKIEEHDTVLVVNIKKSGNES---KKYATSSN 215
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK VN+KK N S KKY +N
Sbjct: 182 VLTKINKIEEHDTVLVVNIKKSGNES---KKYATSSN 215
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK VN+KK N S KKY +N
Sbjct: 182 VLTKINKIEEHDTVLVVNIKKSGNES---KKYATSSN 215
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK VN+KK N S KKY +N
Sbjct: 182 VLTKINKIEEHDTVLVVNIKKSGNES---KKYATSSN 215
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK VN+KK N S KKY +N
Sbjct: 182 VLTKINKIEEHDTVLVVNIKKSGNES---KKYATSSN 215
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK VN+KK N S KKY +N
Sbjct: 182 VLTKINKIEEHDTVLVVNIKKSGNES---KKYATSSN 215
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK VN+KK N S KKY +N
Sbjct: 171 VLTKINKIEEHDTVLVVNIKKSGNES---KKYATSSN 204
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK VN+KK N S KKY +N
Sbjct: 182 VLTKINKIEEHDTVLVVNIKKSGNES---KKYATSSN 215
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK VN+KK N S KKY +N
Sbjct: 182 VLTKINKIEEHDTVLVVNIKKSGNES---KKYATSSN 215
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK VN+KK N S KKY +N
Sbjct: 182 VLTKINKIEEHDTVLVVNIKKSGNES---KKYATSSN 215
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK + VN++K N S KKY +N
Sbjct: 171 VLTKINKIKEHDTVLVVNIEKSENES---KKYATSSN 204
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK VN+KK N S KKY +N
Sbjct: 182 VLTKINKIEEHDTVLVVNIKKSGNES---KKYATSSN 215
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.0 bits (47), Expect = 3.0
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 621 CQSCNRIGQYSCLRCKTCFCEE 686
C S G+YSCL+ F E
Sbjct: 219 CNSKTNTGEYSCLKVDLLFKRE 240
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.0 bits (47), Expect = 3.0
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 621 CQSCNRIGQYSCLRCKTCFCEE 686
C S G+YSCL+ F E
Sbjct: 219 CNSKTNTGEYSCLKVDLLFKRE 240
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.0 bits (47), Expect = 3.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK + VN++K N S KKY +N
Sbjct: 182 VLTKINKIKEHDTVLVVNIEKSGNES---KKYATSSN 215
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 3.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK + VN++K N S KKY +N
Sbjct: 182 VLTKINKIKEHDTVLVVNIEKSGNES---KKYATSSN 215
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 3.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK + VN++K N S KKY +N
Sbjct: 182 VLTKINKIKEHDTVLVVNIEKSGNES---KKYATSSN 215
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.0 bits (47), Expect = 3.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK + VN++K N S KKY +N
Sbjct: 187 VLTKINKIKEHDTVLVVNIEKSGNES---KKYATSSN 220
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.0 bits (47), Expect = 3.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK + VN++K N S KKY +N
Sbjct: 182 VLTKINKIKEHDTVLVVNIEKSGNES---KKYATSSN 215
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.0 bits (47), Expect = 3.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 72 VVTSVNKTRTCQRKRPVNVKKQRNRSCARKKYGPLAN 182
V+T +NK + VN++K N S KKY +N
Sbjct: 182 VLTKINKIKEHDTVLVVNIEKSGNES---KKYATSSN 215
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 22.6 bits (46), Expect = 3.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 95 CFIYRCNNVHNWILRSKSSKNMH*SLKLM 9
C C +V + I + KSSKN+ S+ ++
Sbjct: 10 CLSIACQDVTSAIHQRKSSKNLEHSMNVI 38
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 142 TEVAPERNTGRSRTCRFSSTSL*RCYGVRQMSEKTEDTAFC 264
TE A ++G S TC S + + + S ++E + +C
Sbjct: 7 TENAKVSDSGYSNTCSNSQSQRSSGSSISRNSNRSESSGYC 47
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 142 TEVAPERNTGRSRTCRFSSTSL*RCYGVRQMSEKTEDTAFC 264
TE A ++G S TC S + + + S ++E + +C
Sbjct: 7 TENAKVSDSGYSNTCSNSQSQRSSGSSISRNSNRSESSGYC 47
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 277 AVQRLPTCAHCGKVKC 324
+ ++L TC CGKV C
Sbjct: 1 SAKKLFTCQLCGKVLC 16
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 203 PCNVAMECDKCQKKQKTLHFATSVKLY 283
P ++ C+KC +KQK H A V Y
Sbjct: 65 PDALSTGCNKCNEKQK--HTANKVVNY 89
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.8 bits (44), Expect = 6.9
Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 4/20 (20%)
Frame = +1
Query: 460 TCPLMDAVC----LECERGV 507
TC +MDA+C +C+ GV
Sbjct: 637 TCNIMDAICTKLTADCQPGV 656
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 203 PCNVAMECDKCQKKQKTLHFATSVKLY 283
P ++ C+KC +KQK H A V Y
Sbjct: 65 PDALSTGCNKCNEKQK--HTANKVVNY 89
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,733
Number of Sequences: 438
Number of extensions: 5312
Number of successful extensions: 34
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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