Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00262
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   3.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.8  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +2

Query: 494 VCCLLSIFAMRPICFISFQAYYHKRLSIFYVDFHL 598
           VCCLL +F+       +   Y       FY DF +
Sbjct: 7   VCCLLLMFSYTDNVSSTRTKYLRTNFPNFYNDFEV 41


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 265 LVFLLNHFITAIKINAVYKLVHE 333
           LVF+  +FI    +  +Y  VHE
Sbjct: 143 LVFVFCYFIYLFTVYYIYYSVHE 165


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 555 YAWKEMKQIGRIAKILNKQH 496
           Y WK +   G+I ++L   H
Sbjct: 110 YFWKMLTGFGKIEQVLPPHH 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,694
Number of Sequences: 336
Number of extensions: 2450
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)