Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00262
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   1.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.8  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 61  NSNSPSSAL*IMVPFTHTNKSKYNEHSHC 147
           +S SPS +L    P    NK K   + HC
Sbjct: 40  SSRSPSPSLLTSQPHQDHNKEKSKNNHHC 68


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 533 RLDALQKYSISSIQKEAMYILES 465
           R+DA ++YS   ++ + +YI ES
Sbjct: 284 RVDASEEYSYLRLKGQMLYIPES 306


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 533 RLDALQKYSISSIQKEAMYILES 465
           R+DA ++YS   ++ + +YI ES
Sbjct: 284 RVDASEEYSYLRLKGQMLYIPES 306


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 256 SEFITTA*RHRHKGALGSACEP*P 185
           SE +T    HR   A  S+C+P P
Sbjct: 60  SESLTAQAHHRLYPAFSSSCDPVP 83


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 511 YFCNASNLF 537
           YFC ASNL+
Sbjct: 885 YFCQASNLY 893


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 511 YFCNASNLF 537
           YFC ASNL+
Sbjct: 881 YFCQASNLY 889


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,500
Number of Sequences: 438
Number of extensions: 2278
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)