Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00260
         (730 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160897-1|AAD46837.1|  390|Drosophila melanogaster GM14838p pro...    33   0.30 
AE014134-1208|AAF52469.1|  390|Drosophila melanogaster CG3433-PA...    33   0.30 

>AF160897-1|AAD46837.1|  390|Drosophila melanogaster GM14838p
           protein.
          Length = 390

 Score = 33.5 bits (73), Expect = 0.30
 Identities = 21/55 (38%), Positives = 28/55 (50%)
 Frame = +3

Query: 201 TYSL*PKGLFQLRADG*VAHGLNLREFANTSHSKSSASQILRPDPNRDPSIHFNY 365
           T SL P  + Q+RA      G NL+E A+     S  S ++ P     P+IHFNY
Sbjct: 149 TGSLPPAAVQQMRA-----RGKNLKEGASLPFFASGVSAVIHPRNPHVPTIHFNY 198


>AE014134-1208|AAF52469.1|  390|Drosophila melanogaster CG3433-PA
           protein.
          Length = 390

 Score = 33.5 bits (73), Expect = 0.30
 Identities = 21/55 (38%), Positives = 28/55 (50%)
 Frame = +3

Query: 201 TYSL*PKGLFQLRADG*VAHGLNLREFANTSHSKSSASQILRPDPNRDPSIHFNY 365
           T SL P  + Q+RA      G NL+E A+     S  S ++ P     P+IHFNY
Sbjct: 149 TGSLPPAAVQQMRA-----RGKNLKEGASLPFFASGVSAVIHPRNPHVPTIHFNY 198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,399,397
Number of Sequences: 53049
Number of extensions: 613254
Number of successful extensions: 1514
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)