Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00260
         (730 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   6.8  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   6.8  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   6.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.0  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 385 FNNMRFVTPHAIRTSHKTDSTLQ 453
           +N  R +  H IRT  ++D TLQ
Sbjct: 330 WNEHRTLERHNIRTVAQSDETLQ 352


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 385 FNNMRFVTPHAIRTSHKTDSTLQ 453
           +N  R +  H IRT  ++D TLQ
Sbjct: 330 WNEHRTLERHNIRTVAQSDETLQ 352


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 385 FNNMRFVTPHAIRTSHKTDSTLQ 453
           +N  R +  H IRT  ++D TLQ
Sbjct: 330 WNEHRTLERHNIRTVAQSDETLQ 352


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 332  IRPENLRSTALTMASVSKFSQIEPVSH 252
            I PE++R  ALT  S+    Q  P +H
Sbjct: 1113 IPPEDVRCAALTSQSLQVSWQPPPNTH 1139


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 332  IRPENLRSTALTMASVSKFSQIEPVSH 252
            I PE++R  ALT  S+    Q  P +H
Sbjct: 1109 IPPEDVRCAALTSQSLQVSWQPPPNTH 1135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,591
Number of Sequences: 438
Number of extensions: 4668
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)