BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00259
(680 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119032-1|AAM50892.1| 661|Drosophila melanogaster LP05709p pro... 84 1e-16
AY094718-1|AAM11071.1| 287|Drosophila melanogaster GH17783p pro... 84 1e-16
AE014296-2310|AAF49795.2| 3843|Drosophila melanogaster CG7002-PA... 84 1e-16
AB035891-1|BAA88518.1| 3843|Drosophila melanogaster hemolectin p... 84 1e-16
AY113418-1|AAM29423.1| 660|Drosophila melanogaster RE17456p pro... 33 0.36
AF323977-1|AAL55992.1| 660|Drosophila melanogaster fused lobes ... 33 0.36
AE013599-1505|AAM68692.1| 660|Drosophila melanogaster CG8824-PC... 33 0.36
AE013599-1504|AAM68691.2| 673|Drosophila melanogaster CG8824-PB... 33 0.36
AE014298-1581|AAF48017.1| 424|Drosophila melanogaster CG11105-P... 30 2.5
AE014298-1580|AAN09292.1| 488|Drosophila melanogaster CG11105-P... 30 2.5
AE014298-1474|AAF46609.1| 624|Drosophila melanogaster CG15295-P... 30 2.5
AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA... 30 2.5
AE014134-2278|AAF53242.2| 1263|Drosophila melanogaster CG5122-PA... 30 2.5
X14460-1|CAA32629.1| 149|Drosophila melanogaster protein ( Dros... 30 3.4
X14459-1|CAB37631.1| 494|Drosophila melanogaster protein ( Dros... 30 3.4
X14458-1|CAA32627.1| 489|Drosophila melanogaster protein ( Dros... 30 3.4
X07870-1|CAA30720.1| 494|Drosophila melanogaster bcd protein. 30 3.4
M14549-1|AAA28385.1| 36|Drosophila melanogaster protein ( D.me... 30 3.4
BT021332-1|AAX33480.1| 494|Drosophila melanogaster RE03232p pro... 30 3.4
AY058658-1|AAL13887.1| 489|Drosophila melanogaster LD36304p pro... 30 3.4
AF466645-1|AAL77032.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466644-1|AAL77031.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466643-1|AAL77030.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466642-1|AAL77029.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466641-1|AAL77028.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466640-1|AAL77027.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466639-1|AAL77026.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466638-1|AAL77025.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466637-1|AAL77024.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466636-1|AAL77023.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466635-1|AAL77022.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466634-1|AAL77021.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466633-1|AAL77020.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466632-1|AAL77019.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466631-1|AAL77018.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466630-1|AAL77017.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466629-1|AAL77016.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466628-1|AAL77015.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466627-1|AAL77014.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466626-1|AAL77013.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466625-1|AAL77012.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466624-1|AAL77011.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466623-1|AAL77010.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466622-1|AAL77009.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AF466621-1|AAL77008.1| 489|Drosophila melanogaster bicoid protein. 30 3.4
AE014297-513|AAF54085.2| 494|Drosophila melanogaster CG1034-PG,... 30 3.4
AE014297-512|AAN13369.1| 489|Drosophila melanogaster CG1034-PD,... 30 3.4
AE014297-511|AAN13368.1| 149|Drosophila melanogaster CG1034-PA,... 30 3.4
AE001572-8|AAD19798.1| 494|Drosophila melanogaster DNA-binding-... 30 3.4
AY075400-1|AAL68230.1| 810|Drosophila melanogaster LD29741p pro... 29 4.5
AE014296-331|AAF47547.2| 685|Drosophila melanogaster CG13930-PA... 29 4.5
AE014134-3028|AAF53750.1| 810|Drosophila melanogaster CG10492-P... 29 4.5
AE014298-1473|AAF46608.1| 2090|Drosophila melanogaster CG9817-PA... 29 5.9
DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr... 29 7.8
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p... 29 7.8
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB... 29 7.8
>AY119032-1|AAM50892.1| 661|Drosophila melanogaster LP05709p
protein.
Length = 661
Score = 84.2 bits (199), Expect = 1e-16
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +2
Query: 23 CCQICNEKP--QALSKCVPKSIPSSDTVGLIRIPMGAHGLCVNKFPITGFTECHGSCDSG 196
CC+ C +P + S C+P S+ S T +++ P+ HG CVN PI GFT+C G+C SG
Sbjct: 521 CCKRCKSEPLVEDKSSCLPVSLAESRTKEILKFPVQGHGTCVNADPIQGFTDCEGACSSG 580
Query: 197 TIYNNQTGTHESACECCQAGS 259
+ YN T HE C CC S
Sbjct: 581 SKYNTLTDMHEKFCTCCSIKS 601
Score = 32.7 bits (71), Expect = 0.48
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 214 DRYARVCVRVLSGRKYSGVSVRLTCEDGTVRPHRVATPARCHCAAC 351
D + + C S + Y +SV++ C+DG + P+ C C+ C
Sbjct: 588 DMHEKFCT-CCSIKSYHPISVKMICDDGHTFTQKHEVPSNCGCSPC 632
>AY094718-1|AAM11071.1| 287|Drosophila melanogaster GH17783p
protein.
Length = 287
Score = 84.2 bits (199), Expect = 1e-16
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +2
Query: 23 CCQICNEKP--QALSKCVPKSIPSSDTVGLIRIPMGAHGLCVNKFPITGFTECHGSCDSG 196
CC+ C +P + S C+P S+ S T +++ P+ HG CVN PI GFT+C G+C SG
Sbjct: 147 CCKRCKSEPLVEDKSSCLPVSLAESRTKEILKFPVQGHGTCVNADPIQGFTDCEGACSSG 206
Query: 197 TIYNNQTGTHESACECCQAGS 259
+ YN T HE C CC S
Sbjct: 207 SKYNTLTDMHEKFCTCCSIKS 227
Score = 32.7 bits (71), Expect = 0.48
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 214 DRYARVCVRVLSGRKYSGVSVRLTCEDGTVRPHRVATPARCHCAAC 351
D + + C S + Y +SV++ C+DG + P+ C C+ C
Sbjct: 214 DMHEKFCT-CCSIKSYHPISVKMICDDGHTFTQKHEVPSNCGCSPC 258
>AE014296-2310|AAF49795.2| 3843|Drosophila melanogaster CG7002-PA
protein.
Length = 3843
Score = 84.2 bits (199), Expect = 1e-16
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +2
Query: 23 CCQICNEKP--QALSKCVPKSIPSSDTVGLIRIPMGAHGLCVNKFPITGFTECHGSCDSG 196
CC+ C +P + S C+P S+ S T +++ P+ HG CVN PI GFT+C G+C SG
Sbjct: 3703 CCKRCKSEPLVEDKSSCLPVSLAESRTKEILKFPVQGHGTCVNADPIQGFTDCEGACSSG 3762
Query: 197 TIYNNQTGTHESACECCQAGS 259
+ YN T HE C CC S
Sbjct: 3763 SKYNTLTDMHEKFCTCCSIKS 3783
Score = 32.7 bits (71), Expect = 0.48
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 214 DRYARVCVRVLSGRKYSGVSVRLTCEDGTVRPHRVATPARCHCAAC 351
D + + C S + Y +SV++ C+DG + P+ C C+ C
Sbjct: 3770 DMHEKFCT-CCSIKSYHPISVKMICDDGHTFTQKHEVPSNCGCSPC 3814
>AB035891-1|BAA88518.1| 3843|Drosophila melanogaster hemolectin
protein.
Length = 3843
Score = 84.2 bits (199), Expect = 1e-16
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +2
Query: 23 CCQICNEKP--QALSKCVPKSIPSSDTVGLIRIPMGAHGLCVNKFPITGFTECHGSCDSG 196
CC+ C +P + S C+P S+ S T +++ P+ HG CVN PI GFT+C G+C SG
Sbjct: 3703 CCKRCKSEPLVEDKSSCLPVSLAESRTKEILKFPVQGHGTCVNADPIQGFTDCEGACSSG 3762
Query: 197 TIYNNQTGTHESACECCQAGS 259
+ YN T HE C CC S
Sbjct: 3763 SKYNTLTDMHEKFCTCCSIKS 3783
Score = 32.7 bits (71), Expect = 0.48
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 214 DRYARVCVRVLSGRKYSGVSVRLTCEDGTVRPHRVATPARCHCAAC 351
D + + C S + Y +SV++ C+DG + P+ C C+ C
Sbjct: 3770 DMHEKFCT-CCSIKSYHPISVKMICDDGHTFTQKHEVPSNCGCSPC 3814
>AY113418-1|AAM29423.1| 660|Drosophila melanogaster RE17456p
protein.
Length = 660
Score = 33.1 bits (72), Expect = 0.36
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 154 HHRLHGVP-RLLRLWNYL*QPDRYARVCVRVLSGRKYSGVSVRLTCEDGTVRPH 312
HH G P + + W Y + DR RV S ++ S +S +TC D + PH
Sbjct: 47 HHDASGFPIPVEKSWTYKCENDRCMRVGHHGKSAKRVSFISCSMTCGDVNIWPH 100
>AF323977-1|AAL55992.1| 660|Drosophila melanogaster fused lobes
protein.
Length = 660
Score = 33.1 bits (72), Expect = 0.36
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 154 HHRLHGVP-RLLRLWNYL*QPDRYARVCVRVLSGRKYSGVSVRLTCEDGTVRPH 312
HH G P + + W Y + DR RV S ++ S +S +TC D + PH
Sbjct: 47 HHDASGFPIPVEKSWTYKCENDRCMRVGHHGKSAKRVSFISCSMTCGDVNIWPH 100
>AE013599-1505|AAM68692.1| 660|Drosophila melanogaster CG8824-PC,
isoform C protein.
Length = 660
Score = 33.1 bits (72), Expect = 0.36
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 154 HHRLHGVP-RLLRLWNYL*QPDRYARVCVRVLSGRKYSGVSVRLTCEDGTVRPH 312
HH G P + + W Y + DR RV S ++ S +S +TC D + PH
Sbjct: 47 HHDASGFPIPVEKSWTYKCENDRCMRVGHHGKSAKRVSFISCSMTCGDVNIWPH 100
>AE013599-1504|AAM68691.2| 673|Drosophila melanogaster CG8824-PB,
isoform B protein.
Length = 673
Score = 33.1 bits (72), Expect = 0.36
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 154 HHRLHGVP-RLLRLWNYL*QPDRYARVCVRVLSGRKYSGVSVRLTCEDGTVRPH 312
HH G P + + W Y + DR RV S ++ S +S +TC D + PH
Sbjct: 60 HHDASGFPIPVEKSWTYKCENDRCMRVGHHGKSAKRVSFISCSMTCGDVNIWPH 113
>AE014298-1581|AAF48017.1| 424|Drosophila melanogaster CG11105-PA,
isoform A protein.
Length = 424
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 266 ACPCDSRAKTGRSDRTGSPRRRAATVPPADPDSL 367
ACP S +K G + +P A PPADP L
Sbjct: 337 ACPPASLSKAGAAAAAAAPGPPAPPAPPADPSQL 370
>AE014298-1580|AAN09292.1| 488|Drosophila melanogaster CG11105-PB,
isoform B protein.
Length = 488
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 266 ACPCDSRAKTGRSDRTGSPRRRAATVPPADPDSL 367
ACP S +K G + +P A PPADP L
Sbjct: 401 ACPPASLSKAGAAAAAAAPGPPAPPAPPADPSQL 434
>AE014298-1474|AAF46609.1| 624|Drosophila melanogaster CG15295-PA
protein.
Length = 624
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = +2
Query: 206 NNQTGTHESACECCQAGSTAACPCDSRAKTGRSDRTGSPRRRAATVPPADPDSLSTLN 379
NN T H++ + C S+++ C S + + + GS + ++ PA + + N
Sbjct: 63 NNNTSNHKNNSKRCSRSSSSSSSCSSSSSSSSNASVGSSMSKTSSGNPAAAGATNAAN 120
>AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA
protein.
Length = 2112
Score = 30.3 bits (65), Expect = 2.5
Identities = 23/87 (26%), Positives = 32/87 (36%), Gaps = 3/87 (3%)
Frame = +2
Query: 161 GFTECHGSCDSGTIYNN--QTGTHE-SACECCQAGSTAACPCDSRAKTGRSDRTGSPRRR 331
GFT C +GT+++ QT H + C +T PC+ + T S
Sbjct: 1313 GFTSIPFQCGAGTVWDQDLQTCNHNFNNCSTGTESTTPKPPCEPATNGTTATSTSSTTTP 1372
Query: 332 AATVPPADPDSLSTLNLVTHPTLVPRT 412
T P S + L T L P T
Sbjct: 1373 PPTTTDLPPTSTTGLPPTTTTELPPTT 1399
>AE014134-2278|AAF53242.2| 1263|Drosophila melanogaster CG5122-PA
protein.
Length = 1263
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 239 ECCQAGSTAACPCDSRAKTGRSDRTGSPRRRAATVPPADP 358
EC Q A+CP S +K + +GSP+ + P A+P
Sbjct: 371 ECKQEKKMASCPNASVSKKAATVPSGSPKSPESAAPKAEP 410
>X14460-1|CAA32629.1| 149|Drosophila melanogaster protein (
Drosophila c53.46.5bcd (bicoid) mRNA (minor 1.6 kb
transcript). ).
Length = 149
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>X14459-1|CAB37631.1| 494|Drosophila melanogaster protein (
Drosophila c53.46.9bcd (bicoid) mRNA (major 2.6 kb
transcript). ).
Length = 494
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>X14458-1|CAA32627.1| 489|Drosophila melanogaster protein (
Drosophila c53.46.6,7 bcd (bicoid) mRNA (major 2.6 kb
transcript). ).
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>X07870-1|CAA30720.1| 494|Drosophila melanogaster bcd protein.
Length = 494
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>M14549-1|AAA28385.1| 36|Drosophila melanogaster protein (
D.melanogaster bcd gene(paired) encoding a PRD 4
protein, partial. ).
Length = 36
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 1 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 28
>BT021332-1|AAX33480.1| 494|Drosophila melanogaster RE03232p
protein.
Length = 494
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AY058658-1|AAL13887.1| 489|Drosophila melanogaster LD36304p
protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466645-1|AAL77032.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466644-1|AAL77031.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466643-1|AAL77030.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466642-1|AAL77029.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466641-1|AAL77028.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466640-1|AAL77027.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466639-1|AAL77026.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466638-1|AAL77025.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466637-1|AAL77024.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466636-1|AAL77023.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466635-1|AAL77022.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466634-1|AAL77021.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466633-1|AAL77020.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466632-1|AAL77019.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466631-1|AAL77018.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466630-1|AAL77017.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466629-1|AAL77016.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466628-1|AAL77015.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466627-1|AAL77014.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466626-1|AAL77013.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466625-1|AAL77012.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466624-1|AAL77011.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466623-1|AAL77010.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466622-1|AAL77009.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AF466621-1|AAL77008.1| 489|Drosophila melanogaster bicoid protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AE014297-513|AAF54085.2| 494|Drosophila melanogaster CG1034-PG,
isoform G protein.
Length = 494
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AE014297-512|AAN13369.1| 489|Drosophila melanogaster CG1034-PD,
isoform D protein.
Length = 489
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AE014297-511|AAN13368.1| 149|Drosophila melanogaster CG1034-PA,
isoform A protein.
Length = 149
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AE001572-8|AAD19798.1| 494|Drosophila melanogaster
DNA-binding-protein,transcription-factor protein.
Length = 494
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 79 HPELRHCRSDPHPDGSPRPVRQQVPHHR 162
H L H + PHP P P PHH+
Sbjct: 12 HHPLPHTHTHPHPHSHPHPHSHPHPHHQ 39
>AY075400-1|AAL68230.1| 810|Drosophila melanogaster LD29741p
protein.
Length = 810
Score = 29.5 bits (63), Expect = 4.5
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 34 LQRETASPQ*MRP*EHPELRHCRSDPHPDGSPRPVRQQVPHHRLHGVP 177
L E +PQ R + P L+H PHP V QQ P H +H +P
Sbjct: 162 LVAERFAPQMQRQTQTPVLQH----PHPPSPHDLVIQQQPPHVIHQIP 205
>AE014296-331|AAF47547.2| 685|Drosophila melanogaster CG13930-PA
protein.
Length = 685
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 361 LTKHPKPGHASYSGTKNPVQPERDREYVIPDIFQRFGGSEEKPRL 495
++K P+ G KNPV PER Y +P + F S +P+L
Sbjct: 320 VSKLPRSGWVYVWNIKNPVNPERRYHYQVPVVTVEF--SPTQPQL 362
>AE014134-3028|AAF53750.1| 810|Drosophila melanogaster CG10492-PA
protein.
Length = 810
Score = 29.5 bits (63), Expect = 4.5
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 34 LQRETASPQ*MRP*EHPELRHCRSDPHPDGSPRPVRQQVPHHRLHGVP 177
L E +PQ R + P L+H PHP V QQ P H +H +P
Sbjct: 162 LVAERFAPQMQRQTQTPVLQH----PHPPSPHDLVIQQQPPHVIHQIP 205
>AE014298-1473|AAF46608.1| 2090|Drosophila melanogaster CG9817-PA
protein.
Length = 2090
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 13 QYYLLSDLQRETASPQ*MRP*EHPELRHCRSDPHPDGSPRPVRQQVPHHRLHGVP 177
Q++L Q+ PQ P HP H + PH + +QQ +LHG P
Sbjct: 993 QHHLHQQHQQLHHDPQQQHPQYHPHQLHAHALPHQQ-QQQQQQQQQQQQQLHGDP 1046
>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
protein.
Length = 2176
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 293 TGRSDRTGSPRRRAATVPPADPDSLSTLNLVTHPTLVPRT 412
T T +P A T PP P SL+T PTL P T
Sbjct: 900 TAAPPATPAPVPPATTTPPPSPPSLATETPTLPPTLPPVT 939
>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
protein.
Length = 2165
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 293 TGRSDRTGSPRRRAATVPPADPDSLSTLNLVTHPTLVPRT 412
T T +P A T PP P SL+T PTL P T
Sbjct: 889 TAAPPATPAPVPPATTTPPPSPPSLATETPTLPPTLPPVT 928
>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
protein.
Length = 1984
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 293 TGRSDRTGSPRRRAATVPPADPDSLSTLNLVTHPTLVPRT 412
T T +P A T PP P SL+T PTL P T
Sbjct: 693 TAAPPATPAPVPPATTTPPPSPPSLATETPTLPPTLPPVT 732
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,667,076
Number of Sequences: 53049
Number of extensions: 753526
Number of successful extensions: 2769
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 2507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2730
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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