Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00259
         (680 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    27   0.17 
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              25   0.51 
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    25   0.51 
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   4.7  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   4.7  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    22   4.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   6.2  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   6.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   6.2  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   8.2  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = -3

Query: 459 EYIRDHVLPVPLRLYWVLGTRVGCVTRFRVLSESGSAGGTVAARRRGDPVRSDRPVFARE 280
           EYI ++ LPV + + W     V  V R+R    +     ++   R G P  +  P +A+ 
Sbjct: 61  EYIPENALPVGIEI-WRNKLFV-TVPRWRNGIPATLTYISLDTNRGGSPKLTPYPNWAQN 118

Query: 279 SHGHA-AVLPA*QHSHADSCVPVWLL 205
             G   + +      HADSC  +W+L
Sbjct: 119 KAGACGSAITTAYRIHADSCDRLWVL 144


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +1

Query: 259 YSGVSVRLTCEDGTVRPHRVATPARCHCAACG 354
           Y    ++L  E+  V   ++  P  C C  CG
Sbjct: 110 YDADGIKLMNEENGVMEIKIREPVECKCIKCG 141


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +1

Query: 259 YSGVSVRLTCEDGTVRPHRVATPARCHCAACG 354
           Y    ++L  E+  V   ++  P  C C  CG
Sbjct: 110 YDADGIKLMNEENGVMEIKIREPVECKCIKCG 141


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 5   DIVNTTCCQICNEKPQALSKCVPKSIPSSDTVG 103
           D +N     + +EKPQ  ++C+ K     D  G
Sbjct: 45  DDINEVNFDVEDEKPQRYNECILKQFNIVDESG 77


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 5   DIVNTTCCQICNEKPQALSKCVPKSIPSSDTVG 103
           D +N     + +EKPQ  ++C+ K     D  G
Sbjct: 45  DDINEVNFDVEDEKPQRYNECILKQFNIVDESG 77


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +1

Query: 94  HCRS-DPHPDGSPRPVRQQVPHHRLHGVP 177
           HC +  P P G    +++QVP  R  G P
Sbjct: 351 HCGNFPPRPMGPWISIQEQVPRFRYIGPP 379


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 191 SGTIYNNQTGTHESACECCQAGSTAACP 274
           SGT  N  T T  S  +  Q G+   CP
Sbjct: 235 SGTALNCWTQTENSLEKAKQVGAFMGCP 262


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 191 SGTIYNNQTGTHESACECCQAGSTAACP 274
           SGT  N  T T  S  +  Q G+   CP
Sbjct: 106 SGTALNCWTQTENSLEKAKQVGAFMGCP 133


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 191 SGTIYNNQTGTHESACECCQAGSTAACP 274
           SGT  N  T T  S  +  Q G+   CP
Sbjct: 235 SGTALNCWTQTENSLEKAKQVGAFMGCP 262


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -3

Query: 222 VPVWLL*IVPESQEPWHSVKPVMGNLLTHRPWAPIGMRIRP 100
           VP++     P S EPW S++  +       P  P    I P
Sbjct: 367 VPIYCGNFPPRSMEPWISMQEQIPRFRHIGPSTPFPRFIPP 407


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,492
Number of Sequences: 438
Number of extensions: 4682
Number of successful extensions: 24
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)