Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00258
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z83237-2|CAB05789.1| 258|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z54327-5|CAD57689.1| 238|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z54327-4|CAD42641.1| 132|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z54327-3|CAD36481.1| 596|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z54327-2|CAA91123.1| 658|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 8.1
AF480493-1|AAL84283.1| 596|Caenorhabditis elegans EFF-1B precur... 28 8.1
AF480492-1|AAL84282.1| 658|Caenorhabditis elegans EFF-1A precur... 28 8.1
AF068721-1|AAC19263.1| 369|Caenorhabditis elegans Hypothetical ... 28 8.1
AF067220-6|AAC16980.2| 303|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 11 STKRSATGPTWVARSPTGSRCATKTTATP 97
ST S+T T V +PT + +T TT+TP
Sbjct: 169 STILSSTATTMVTSTPTTEKSSTTTTSTP 197
>Z83237-2|CAB05789.1| 258|Caenorhabditis elegans Hypothetical
protein R06B9.2 protein.
Length = 258
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 323 TYNDGLARGFPQQATSYGSAFQVRVDRGLRQGSDYHE 433
T DGLA+ PQ++ G+ Q + G R+ +H+
Sbjct: 202 TVKDGLAKILPQRSQENGNIIQGGILNGFRERGIFHD 238
>Z54327-5|CAD57689.1| 238|Caenorhabditis elegans Hypothetical
protein C26D10.5d protein.
Length = 238
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 456 GFMIEELIDRLLRAREPKCSHT 521
GF +EE D L RA P CS T
Sbjct: 22 GFPLEEKFDGLFRAEPPHCSKT 43
>Z54327-4|CAD42641.1| 132|Caenorhabditis elegans Hypothetical
protein C26D10.5c protein.
Length = 132
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 456 GFMIEELIDRLLRAREPKCSHT 521
GF +EE D L RA P CS T
Sbjct: 22 GFPLEEKFDGLFRAEPPHCSKT 43
>Z54327-3|CAD36481.1| 596|Caenorhabditis elegans Hypothetical
protein C26D10.5b protein.
Length = 596
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 456 GFMIEELIDRLLRAREPKCSHT 521
GF +EE D L RA P CS T
Sbjct: 22 GFPLEEKFDGLFRAEPPHCSKT 43
>Z54327-2|CAA91123.1| 658|Caenorhabditis elegans Hypothetical
protein C26D10.5a protein.
Length = 658
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 456 GFMIEELIDRLLRAREPKCSHT 521
GF +EE D L RA P CS T
Sbjct: 22 GFPLEEKFDGLFRAEPPHCSKT 43
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/53 (24%), Positives = 19/53 (35%)
Frame = +3
Query: 21 GQQRARHGSQDPQQDPGARRKRLRHPGLHQG*LGQNSDAHERAHHSEQRQRHY 179
G H S GA + H G H G + H HHS+ ++ +
Sbjct: 674 GTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHSKHSKKQH 726
>AF480493-1|AAL84283.1| 596|Caenorhabditis elegans EFF-1B precursor
protein.
Length = 596
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 456 GFMIEELIDRLLRAREPKCSHT 521
GF +EE D L RA P CS T
Sbjct: 22 GFPLEEKFDGLFRAEPPHCSKT 43
>AF480492-1|AAL84282.1| 658|Caenorhabditis elegans EFF-1A precursor
protein.
Length = 658
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 456 GFMIEELIDRLLRAREPKCSHT 521
GF +EE D L RA P CS T
Sbjct: 22 GFPLEEKFDGLFRAEPPHCSKT 43
>AF068721-1|AAC19263.1| 369|Caenorhabditis elegans Hypothetical
protein ZK1055.5 protein.
Length = 369
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 97 RAYIKDDSVKIVTLMSAPIIPNSARDITRIVNERVGMVVIYGM 225
RAYI D + + I+ ARD+ R+V++ G+ + Y M
Sbjct: 134 RAYIPDGEQRDYLMNKYNIVTWHARDVLRLVDDMSGISMHYAM 176
>AF067220-6|AAC16980.2| 303|Caenorhabditis elegans Hypothetical
protein C33E10.8 protein.
Length = 303
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 333 MDSHVAFLNKQLLMDLLFKCVS--TGDYDKAVTITKSLQDDNVGFMIEELI 479
MD+H +K+L D LFK ++ K++TIT+S D+ + ELI
Sbjct: 89 MDNHEVVFDKRLTADQLFKKLAPFLRKLPKSITITES--SDDCFYFFRELI 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,147,158
Number of Sequences: 27780
Number of extensions: 324916
Number of successful extensions: 1009
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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