Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00257X
         (402 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          27   0.091
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     24   0.49 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   0.49 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   0.49 
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    24   0.49 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   6.0  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 26.6 bits (56), Expect = 0.091
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +2

Query: 146 STPYESVDRSSPPSIPSNRCGSRNRS--TTSLVPPLYTEVL 262
           S  Y S++ ++PP  P  R  S   +  T S +PPLY +++
Sbjct: 720 SISYLSMENNAPPPPPPPRVESFAETVRTVSKIPPLYKDLV 760


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 24.2 bits (50), Expect = 0.49
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = -2

Query: 341 QDHKRNLSHPLGGSAVGHHNLKSQRLE 261
           +++ +N   P GG   G+H+++ Q+L+
Sbjct: 35  EEYNQNSYIPPGGDFFGNHHIQQQQLQ 61


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 24.2 bits (50), Expect = 0.49
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = -2

Query: 341 QDHKRNLSHPLGGSAVGHHNLKSQRLE 261
           +++ +N   P GG   G+H+++ Q+L+
Sbjct: 35  EEYNQNSYIPPGGDFFGNHHIQQQQLQ 61


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 24.2 bits (50), Expect = 0.49
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = -2

Query: 341 QDHKRNLSHPLGGSAVGHHNLKSQRLE 261
           +++ +N   P GG   G+H+++ Q+L+
Sbjct: 35  EEYNQNSYIPPGGDFFGNHHIQQQQLQ 61


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 0.49
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = -2

Query: 341 QDHKRNLSHPLGGSAVGHHNLKSQRLE 261
           +++ +N   P GG   G+H+++ Q+L+
Sbjct: 35  EEYNQNSYIPPGGDFFGNHHIQQQQLQ 61


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +3

Query: 129 CSPREEVLRMNRWIDPRLPLYLP 197
           C+  + V++++ W +P    Y P
Sbjct: 249 CNGLKRVVKLSNWREPLPEAYFP 271


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 345 FTRSQA*FEPPSWRFC 298
           FT  ++ F P S RFC
Sbjct: 305 FTPDRSKFRPSSLRFC 320


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 345 FTRSQA*FEPPSWRFC 298
           FT  ++ F P S RFC
Sbjct: 30  FTPDRSKFRPSSLRFC 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,439
Number of Sequences: 336
Number of extensions: 2188
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)